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The map label for this gene is gerKA [H]

Identifier: 18309630

GI number: 18309630

Start: 809789

End: 811210

Strand: Direct

Name: gerKA [H]

Synonym: CPE0648

Alternate gene names: 18309630

Gene position: 809789-811210 (Clockwise)

Preceding gene: 18309624

Following gene: 18309631

Centisome position: 26.71

GC content: 30.03

Gene sequence:

>1422_bases
ATGCAAAAACAATTAGATTTCTTAAAAGACAAATTAAAAGATAGTTTTGATGTTAAGTATAGGGAGGTGGATACAGCTTT
AGGACCGGCCACAATTGTTTTTATGGATGTTTTATGTTCTACTCAGTTCATAAGTGAGTACATAGTAAAACCATTAACCT
TAGTTAAAGATGGAATAAAAGATGAAAATGATATTATGACTAAGGTTATAGATATAAACATAACAAATTGGTCAAAGGAT
AAAAACGATACATTACTTCATGTATTATCAGGGGATGTAGTAATAATCTTTGATAAGTTTGATAAGGTAATTTATTGCGA
AACAAAGGGTTATACAAGAAGAGGTGTTGGAATTCCAATAACAGAAGCAGTAATAAAGGGACCTAGAGAAGGTTTTAATG
AGGCCTTTGTAGATAATGTTACCTTATTAAGAAGAAGAATAAAAAATCATAATTTAAAATTTGAGCCTTTATATGTAGGG
GAAGATACTCAAACTGTAGTATGCATATCTTATATAAAAAATAAAGCTCCAAAGGAATTAATTGATGAAATCAGAGAAAA
AATAAAAAATTTAGATTATAAGTTTATATTAGATACTAATTATATTGAGGCTAAACTTAGAGAAGATAGAACTTTATTTG
ATACTGTTGGATACACAGAAAAAGCAGATGAGGTAGCAGCAAAACTATTAGAAGGAAGGGTTGCAATAATAGTAGATGGA
ACTCCTTTTGTTCTTACAGTACCTTTCTTTTTTATAGAAAACTTTCAAACACCAGATGATTATTATTTAAATAGGTATTT
TACTAGTTTTACTAGAATTTTAAGATGGATAGCATTTTTTATTGCTATGTTTCTACCAGGAATATATGTTGCATTAGTTA
CTCATCATTTTTCAGTTTTACCTAGTTTATTTGTCTTTAGACTAGCAGTTGCTAGGGCTGGGGTTCCATTTCCTATAGTA
GCAGAGGTAATAATAATGATGTTATTATTCCAAATAATAAAAGAAGCAGGTTTAAGATTGCCTCAACCTATAGGAACATC
TATGAGTTTAGTATCAGGACTTATTTTAGGAGAGGCTGCTGTGGGAGCTGGTATTGCTTCAAGAATAACTATTGTAGTAG
TTGCCTTAAGTGCCGTTTGTTATTTCTTAATTCCTAAGCTTTATGGTGCAGTATCGATTTGGAGTATAGGAATAGTAATT
ACAGCTGCCTTTTTTGGAATTCCTGGTGTGATTTTAATAAGCGTTGTATTATTATCTCACTTAGCACATTTAAGAAGTTG
TGAATATCAATACTTATTCCCACTAGGAACTTTAAATAGATATAAATTTAAAGACATTATTATGAGAGGAAGATTAGACG
AAATATCAAAAGATATAGTCGGTAAGGATGGTAAAAATGAACCTAAAGAAAGTTATAGCTAG

Upstream 100 bases:

>100_bases
GACATCACCTCATTTCTTTTATAATTTCAAATTTTAGTATTCTCAAAAAAATGAATATTAAACATAATACTAGCGGATAA
TATTTTTGGGTGATATATGA

Downstream 100 bases:

>100_bases
TTTACTAAGCATAATAATTATGTCAACCATGCTTATTGGTTGCTATAATTATAAGGATATAAATAGAGTTACATTTGTAA
CAAGCTTAATATTTGATGAA

Product: spore germination protein KA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MQKQLDFLKDKLKDSFDVKYREVDTALGPATIVFMDVLCSTQFISEYIVKPLTLVKDGIKDENDIMTKVIDINITNWSKD
KNDTLLHVLSGDVVIIFDKFDKVIYCETKGYTRRGVGIPITEAVIKGPREGFNEAFVDNVTLLRRRIKNHNLKFEPLYVG
EDTQTVVCISYIKNKAPKELIDEIREKIKNLDYKFILDTNYIEAKLREDRTLFDTVGYTEKADEVAAKLLEGRVAIIVDG
TPFVLTVPFFFIENFQTPDDYYLNRYFTSFTRILRWIAFFIAMFLPGIYVALVTHHFSVLPSLFVFRLAVARAGVPFPIV
AEVIIMMLLFQIIKEAGLRLPQPIGTSMSLVSGLILGEAAVGAGIASRITIVVVALSAVCYFLIPKLYGAVSIWSIGIVI
TAAFFGIPGVILISVVLLSHLAHLRSCEYQYLFPLGTLNRYKFKDIIMRGRLDEISKDIVGKDGKNEPKESYS

Sequences:

>Translated_473_residues
MQKQLDFLKDKLKDSFDVKYREVDTALGPATIVFMDVLCSTQFISEYIVKPLTLVKDGIKDENDIMTKVIDINITNWSKD
KNDTLLHVLSGDVVIIFDKFDKVIYCETKGYTRRGVGIPITEAVIKGPREGFNEAFVDNVTLLRRRIKNHNLKFEPLYVG
EDTQTVVCISYIKNKAPKELIDEIREKIKNLDYKFILDTNYIEAKLREDRTLFDTVGYTEKADEVAAKLLEGRVAIIVDG
TPFVLTVPFFFIENFQTPDDYYLNRYFTSFTRILRWIAFFIAMFLPGIYVALVTHHFSVLPSLFVFRLAVARAGVPFPIV
AEVIIMMLLFQIIKEAGLRLPQPIGTSMSLVSGLILGEAAVGAGIASRITIVVVALSAVCYFLIPKLYGAVSIWSIGIVI
TAAFFGIPGVILISVVLLSHLAHLRSCEYQYLFPLGTLNRYKFKDIIMRGRLDEISKDIVGKDGKNEPKESYS
>Mature_473_residues
MQKQLDFLKDKLKDSFDVKYREVDTALGPATIVFMDVLCSTQFISEYIVKPLTLVKDGIKDENDIMTKVIDINITNWSKD
KNDTLLHVLSGDVVIIFDKFDKVIYCETKGYTRRGVGIPITEAVIKGPREGFNEAFVDNVTLLRRRIKNHNLKFEPLYVG
EDTQTVVCISYIKNKAPKELIDEIREKIKNLDYKFILDTNYIEAKLREDRTLFDTVGYTEKADEVAAKLLEGRVAIIVDG
TPFVLTVPFFFIENFQTPDDYYLNRYFTSFTRILRWIAFFIAMFLPGIYVALVTHHFSVLPSLFVFRLAVARAGVPFPIV
AEVIIMMLLFQIIKEAGLRLPQPIGTSMSLVSGLILGEAAVGAGIASRITIVVVALSAVCYFLIPKLYGAVSIWSIGIVI
TAAFFGIPGVILISVVLLSHLAHLRSCEYQYLFPLGTLNRYKFKDIIMRGRLDEISKDIVGKDGKNEPKESYS

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 53482; Mature: 53482

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQLDFLKDKLKDSFDVKYREVDTALGPATIVFMDVLCSTQFISEYIVKPLTLVKDGIK
CCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DENDIMTKVIDINITNWSKDKNDTLLHVLSGDVVIIFDKFDKVIYCETKGYTRRGVGIPI
CCHHHEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCH
TEAVIKGPREGFNEAFVDNVTLLRRRIKNHNLKFEPLYVGEDTQTVVCISYIKNKAPKEL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHCCCHHHH
IDEIREKIKNLDYKFILDTNYIEAKLREDRTLFDTVGYTEKADEVAAKLLEGRVAIIVDG
HHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEECC
TPFVLTVPFFFIENFQTPDDYYLNRYFTSFTRILRWIAFFIAMFLPGIYVALVTHHFSVL
CCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLFVFRLAVARAGVPFPIVAEVIIMMLLFQIIKEAGLRLPQPIGTSMSLVSGLILGEAA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VGAGIASRITIVVVALSAVCYFLIPKLYGAVSIWSIGIVITAAFFGIPGVILISVVLLSH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAHLRSCEYQYLFPLGTLNRYKFKDIIMRGRLDEISKDIVGKDGKNEPKESYS
HHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKQLDFLKDKLKDSFDVKYREVDTALGPATIVFMDVLCSTQFISEYIVKPLTLVKDGIK
CCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DENDIMTKVIDINITNWSKDKNDTLLHVLSGDVVIIFDKFDKVIYCETKGYTRRGVGIPI
CCHHHEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCH
TEAVIKGPREGFNEAFVDNVTLLRRRIKNHNLKFEPLYVGEDTQTVVCISYIKNKAPKEL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHCCCHHHH
IDEIREKIKNLDYKFILDTNYIEAKLREDRTLFDTVGYTEKADEVAAKLLEGRVAIIVDG
HHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEECC
TPFVLTVPFFFIENFQTPDDYYLNRYFTSFTRILRWIAFFIAMFLPGIYVALVTHHFSVL
CCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSLFVFRLAVARAGVPFPIVAEVIIMMLLFQIIKEAGLRLPQPIGTSMSLVSGLILGEAA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VGAGIASRITIVVVALSAVCYFLIPKLYGAVSIWSIGIVITAAFFGIPGVILISVVLLSH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAHLRSCEYQYLFPLGTLNRYKFKDIIMRGRLDEISKDIVGKDGKNEPKESYS
HHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]