Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is phoU [H]

Identifier: 18309623

GI number: 18309623

Start: 803218

End: 803871

Strand: Direct

Name: phoU [H]

Synonym: CPE0641

Alternate gene names: 18309623

Gene position: 803218-803871 (Clockwise)

Preceding gene: 18309622

Following gene: 18309624

Centisome position: 26.5

GC content: 27.06

Gene sequence:

>654_bases
ATGAGTATAGATGATTTAAGAATAAGTATAAAAGAATTAAAATCTGAAACTAAAGAAATGATGGAATTATGTGAAGTAGC
CATAGAAAAATCAGTAGATTCAATAGTTAATAAGGATTTAGAACTAGCTAGAGAAGTTATAAAAATGGATGATGATATAG
ATAACTTAAGAAATAAAATAATTGAAAAATCTATTGAACTTACTGCTTTAAAGCAGCCTATGGCTAAAGATTTAAGAAAT
GTATATGCCTTATCAACTATAGCTATGGAACTTGAGAGAGTAGGAGATTATTCAGTTAATATAGCTATGGAAACAATAAA
AATAGATAATGAAGAGCATATTACAGGAATGGTAGGCATACCTAAAATGAAATCAGTTTGTTTAAATATGCTAAATGCTG
CAAAAAATGCATTAGATAGTAATGAAACAAAGTTAGCTTATGATGCCGCCTTAGAGGATAATATAGTTGATGATTTATAT
AATGATGTTTATGTAAATTTATTAGCTGCAATGCACAAAGATTCTAATAATATAAATCAAGGGGTTAAATTAATATTTGT
TGCTAGATATTTAGAGAGAATAGGTGATCATATAACTAATGTTTGTGAAAATATAGTCTATGCCATAAAAGGTGATATGA
CTGAACTTGGATAA

Upstream 100 bases:

>100_bases
TAGTGATACTAATACAATCTTTACAAATCCAAGAGATAAGAGAACAGAAGATTATATAACAGGAAGATTTGGCTAAAATT
ATAAGGGGTGATTAGAGTAA

Downstream 100 bases:

>100_bases
TAACATAAAATATAAATAAGATAAAATTTAGCTTATTAGGTCTGACTTAATTAGTATAATAATTTAAAGATATATCTATA
AGTGGTATATCTTTTTTTGT

Product: phosphate transporter PhoU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSIDDLRISIKELKSETKEMMELCEVAIEKSVDSIVNKDLELAREVIKMDDDIDNLRNKIIEKSIELTALKQPMAKDLRN
VYALSTIAMELERVGDYSVNIAMETIKIDNEEHITGMVGIPKMKSVCLNMLNAAKNALDSNETKLAYDAALEDNIVDDLY
NDVYVNLLAAMHKDSNNINQGVKLIFVARYLERIGDHITNVCENIVYAIKGDMTELG

Sequences:

>Translated_217_residues
MSIDDLRISIKELKSETKEMMELCEVAIEKSVDSIVNKDLELAREVIKMDDDIDNLRNKIIEKSIELTALKQPMAKDLRN
VYALSTIAMELERVGDYSVNIAMETIKIDNEEHITGMVGIPKMKSVCLNMLNAAKNALDSNETKLAYDAALEDNIVDDLY
NDVYVNLLAAMHKDSNNINQGVKLIFVARYLERIGDHITNVCENIVYAIKGDMTELG
>Mature_216_residues
SIDDLRISIKELKSETKEMMELCEVAIEKSVDSIVNKDLELAREVIKMDDDIDNLRNKIIEKSIELTALKQPMAKDLRNV
YALSTIAMELERVGDYSVNIAMETIKIDNEEHITGMVGIPKMKSVCLNMLNAAKNALDSNETKLAYDAALEDNIVDDLYN
DVYVNLLAAMHKDSNNINQGVKLIFVARYLERIGDHITNVCENIVYAIKGDMTELG

Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]

COG id: COG0704

COG function: function code P; Phosphate uptake regulator

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoU family [H]

Homologues:

Organism=Escherichia coli, GI1790161, Length=209, Percent_Identity=28.7081339712919, Blast_Score=97, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008170 [H]

Pfam domain/function: PF01895 PhoU [H]

EC number: NA

Molecular weight: Translated: 24445; Mature: 24313

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDDLRISIKELKSETKEMMELCEVAIEKSVDSIVNKDLELAREVIKMDDDIDNLRNKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IEKSIELTALKQPMAKDLRNVYALSTIAMELERVGDYSVNIAMETIKIDNEEHITGMVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCC
PKMKSVCLNMLNAAKNALDSNETKLAYDAALEDNIVDDLYNDVYVNLLAAMHKDSNNINQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GVKLIFVARYLERIGDHITNVCENIVYAIKGDMTELG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
SIDDLRISIKELKSETKEMMELCEVAIEKSVDSIVNKDLELAREVIKMDDDIDNLRNKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IEKSIELTALKQPMAKDLRNVYALSTIAMELERVGDYSVNIAMETIKIDNEEHITGMVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHCCCCCC
PKMKSVCLNMLNAAKNALDSNETKLAYDAALEDNIVDDLYNDVYVNLLAAMHKDSNNINQ
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GVKLIFVARYLERIGDHITNVCENIVYAIKGDMTELG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]