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The map label for this gene is licB [H]

Identifier: 18309610

GI number: 18309610

Start: 788258

End: 789226

Strand: Direct

Name: licB [H]

Synonym: CPE0628

Alternate gene names: 18309610

Gene position: 788258-789226 (Clockwise)

Preceding gene: 18309609

Following gene: 18309611

Centisome position: 26.0

GC content: 30.34

Gene sequence:

>969_bases
ATGTTTAAAAGTAATTATAAGGGATATGGTAGTGGAATTATATCTGCTATGGCTTGGGGGCTAGATACTGTTTTAGTTGG
AGTTATATTATCCATGGCTCCATTTATAAATACAGAGGCAGCTATAATGTTAGCTCCTTTTGTAAGTACATTTTTACATG
ATTTTTTTTCAACTTTATGGATGTTTATTTATATGATTTTTACAAGACAAGTTGGAAAACTTTTTAAGTCATTAAAAACT
CCAAGTACAAAATATGTTATTTTAGCATCTATATTTGGTGGGCCTATGGGTATGACTGGATATTTACTTTCTGTTAACTA
TATAGGACCATCATATGCAGCTACTATATCATCAATATATCCTGCAGTTGGAGCAATTTTAGCAGCAATATTCTTAAAAG
AAAAAATTAGTAGAAAAGGATATATTGGATTAACAATAAGTATATTAGGAATAGCTCTTTTAGGATTTGGAAATGATGGG
GGAAAAGCTAGTTTAATAGGATTTTTATTTGCTGGGTTAAGTGTTTTAGGATGGGGTTCAGAATCTGTAATATGCTCTTA
TGGTATGAAAGATGAAGATATAAGTCCTAAGCAAGCTTTACAAATTAGACAGTTTATATCTGCTCTTTTTTCAGGGGTAA
TAATTCTTCCTTTATTAAAAGCTTATCCATTAGTATTTGAAGTTTTAAAAGGAAATGTTATTTTGGTTATAATAGGCACA
GCTTTAATGGGAACAATCTCTTACGTTTGTTATTATACGGCTATTCATAAATTAGGACCAACAAGAGCAATGGGACTTAA
TATAACTTATGTTGTATGGGCAATGATTTTTGATAAAGTACTATTAGGTCATGATATAACTATTAAAATGGTAATATGTG
CTTTAATGGTTATGATAGGCTCATTTGTAGTGGCAACTCAACCAGCACATGAAGAAGAATTAACTAATGTTACTAATACA
GCAGTTTAG

Upstream 100 bases:

>100_bases
ACTTATGGTATAGATAGATATAATAGAGGAAAGAAAAACTTAGAGTTATTAGATAAAATTTTAATGGGGCAATAAAGTAT
GAATTTAAAGGAGAGGCAGT

Downstream 100 bases:

>100_bases
TTCTTAATAGATATGAAATATATAATAAAAGAAATTAATTATATTTTACTAATTAAGATGGGATTGTAAATGCCTTAATA
TTAGATTATTTTAAAGAAAA

Product: lic-1 operon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MFKSNYKGYGSGIISAMAWGLDTVLVGVILSMAPFINTEAAIMLAPFVSTFLHDFFSTLWMFIYMIFTRQVGKLFKSLKT
PSTKYVILASIFGGPMGMTGYLLSVNYIGPSYAATISSIYPAVGAILAAIFLKEKISRKGYIGLTISILGIALLGFGNDG
GKASLIGFLFAGLSVLGWGSESVICSYGMKDEDISPKQALQIRQFISALFSGVIILPLLKAYPLVFEVLKGNVILVIIGT
ALMGTISYVCYYTAIHKLGPTRAMGLNITYVVWAMIFDKVLLGHDITIKMVICALMVMIGSFVVATQPAHEEELTNVTNT
AV

Sequences:

>Translated_322_residues
MFKSNYKGYGSGIISAMAWGLDTVLVGVILSMAPFINTEAAIMLAPFVSTFLHDFFSTLWMFIYMIFTRQVGKLFKSLKT
PSTKYVILASIFGGPMGMTGYLLSVNYIGPSYAATISSIYPAVGAILAAIFLKEKISRKGYIGLTISILGIALLGFGNDG
GKASLIGFLFAGLSVLGWGSESVICSYGMKDEDISPKQALQIRQFISALFSGVIILPLLKAYPLVFEVLKGNVILVIIGT
ALMGTISYVCYYTAIHKLGPTRAMGLNITYVVWAMIFDKVLLGHDITIKMVICALMVMIGSFVVATQPAHEEELTNVTNT
AV
>Mature_322_residues
MFKSNYKGYGSGIISAMAWGLDTVLVGVILSMAPFINTEAAIMLAPFVSTFLHDFFSTLWMFIYMIFTRQVGKLFKSLKT
PSTKYVILASIFGGPMGMTGYLLSVNYIGPSYAATISSIYPAVGAILAAIFLKEKISRKGYIGLTISILGIALLGFGNDG
GKASLIGFLFAGLSVLGWGSESVICSYGMKDEDISPKQALQIRQFISALFSGVIILPLLKAYPLVFEVLKGNVILVIIGT
ALMGTISYVCYYTAIHKLGPTRAMGLNITYVVWAMIFDKVLLGHDITIKMVICALMVMIGSFVVATQPAHEEELTNVTNT
AV

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34780; Mature: 34780

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSNYKGYGSGIISAMAWGLDTVLVGVILSMAPFINTEAAIMLAPFVSTFLHDFFSTLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MFIYMIFTRQVGKLFKSLKTPSTKYVILASIFGGPMGMTGYLLSVNYIGPSYAATISSIY
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
PAVGAILAAIFLKEKISRKGYIGLTISILGIALLGFGNDGGKASLIGFLFAGLSVLGWGS
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
ESVICSYGMKDEDISPKQALQIRQFISALFSGVIILPLLKAYPLVFEVLKGNVILVIIGT
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
ALMGTISYVCYYTAIHKLGPTRAMGLNITYVVWAMIFDKVLLGHDITIKMVICALMVMIG
HHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SFVVATQPAHEEELTNVTNTAV
HHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MFKSNYKGYGSGIISAMAWGLDTVLVGVILSMAPFINTEAAIMLAPFVSTFLHDFFSTLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
MFIYMIFTRQVGKLFKSLKTPSTKYVILASIFGGPMGMTGYLLSVNYIGPSYAATISSIY
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
PAVGAILAAIFLKEKISRKGYIGLTISILGIALLGFGNDGGKASLIGFLFAGLSVLGWGS
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
ESVICSYGMKDEDISPKQALQIRQFISALFSGVIILPLLKAYPLVFEVLKGNVILVIIGT
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
ALMGTISYVCYYTAIHKLGPTRAMGLNITYVVWAMIFDKVLLGHDITIKMVICALMVMIG
HHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SFVVATQPAHEEELTNVTNTAV
HHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]