| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is thrA
Identifier: 182681890
GI number: 182681890
Start: 1497275
End: 1499782
Strand: Reverse
Name: thrA
Synonym: XfasM23_1358
Alternate gene names: 182681890
Gene position: 1499782-1497275 (Counterclockwise)
Preceding gene: 182681891
Following gene: 182681889
Centisome position: 59.15
GC content: 56.74
Gene sequence:
>2508_bases ATGTCATCGTCTGCTGTCCGGTTGTCCACCGTTGAAACTCCTGTCTACGTTCCGCGTACCGTCGTTCACAAATTCGGTGG GACTTCGGTTGCCGATGCGGATTGCTATCGCCATGTCACGCGTCTCCTATTAGCACGCGAAGAGACTGTGCAGGTCACCA TCGTTTCTGCGATGAAAGGGGTGACTGATACGTTGATTGCACTGGCCGAACAGGCAGCCAATCATTCTCCCGACTGGCAG GTGTTGTGGCAGCAAACCCGCACGCGTCATTGCGACGCCGCTCAGGCATTGCTTGGAGAGCATGCCGCTACGCTGCAAGA TTGGTTGAATACCCGTTTTAATGAACTGCATGAAATGCTGGTGGCCTTGTCCGTCATCGGGATGCTTCCATCTGAAGTGC TGGACCGCTTACAAGGCTTGGGCGAGGTCTACTCCGCACAGTTGCTTGGGCATTATTTGCAATCCCAGGGTGAGGATTGT GTCGTTCTGGATGCCCGCCAAGTCCTTGTGGTGAGTCCTGGTGAGTTTGGCGCCGAAGTCGATTGGGCAACCAGTGCCCA GCACTTGGCCCATTGGCGTATGCAGCATCCACAGCGGCGTGTGGTGGTCACCGGTTTCGTTGCCTCTGATCGTACTGGAC GCGCCATCACCCTGGGTCGCAACGGCAGTGATTATTCCGGTGCCATCTTCGCGGCGTTGTTTGAGGCCGATGAGCTTCAC ATCTGGACAGATGTTGATGGAGTCATGTCCGCCGACCCCCGGGTCGTCCCGGATGCGGTGCAACTGGATGCCTTGAGTTA CGACGAAGCATGTGAATTGGCCTATTTCGGCGCCAAGGTAGTGCATCCACAAACCATGTCGCCGGTGATGAAACGCGGAG TGCCGATCATCATTCGAAACACCTTCCAACCCGGACATCCAGGGACTCGGATCACCGCTGATAGCGTGGTGAGTGGATCT GTTAAAGGCCTGACCCTGAGTCCAGGACTGGCCGTGCTGAACCTGGAAGGCACGGGGCTGATCGGAGTCCCTGGTACCGC TGAACGCGTGTTTGCCGCCCTGCGTAATGCACGTTTGTCTGTCGTGATGATCTCACAGGGATCTTCGGAGCATTCCATTT GCTGCCTCGTGCACCAAACCGAGGCCGAGCGTGCACGTGATGCGTTGTTGTATGCCTTTGCCCATGAATTGGCCATAGGG CATGTCCAGCGCGTACAACTGACCAACAATATCAGCGTATTGGCGGCGGTTGGCGACGGCATGGCTGGTCACCTGGGTGT AGCGGCGCGCTTGTTTGAATCCTTAAGGCGCGCCCATGTCAACATCCTGGCCATTGCCCAGGGGTCTTCAGAGCGCAATA TTTCGGTGGCAATCGACAGTCAGCAGGCGACGAAGGCACTGCGCGCTGCACACGCTGCTTTCTGGTTATCACCCCAGACA TTTTCGATTGGTGTGATTGGTCCGGGTCACGTTGGTGAGGCCCTGTTGGACCAGCTATGTGCTGCACAGCAGCAATTACT GTCCAAGGCAAATCTGGATCTGCGTTTGCGTGCGATCGTTTCACGGCGGCGTATGTTATTGGATGAGCGTGGCCTGGGGA GTGACTGGCGCCACGCCTTCGCCGCCGCACCAGAGGCGGTCGATCTGGATGCCTTTACCGCACACTTACAGGCCGCCCAT CTGCCTCATGCAGTCATCATTGACTGTAGCGGCAGTGCTGAGGTGGCTGATCGCTATGCCGACTGGCTGGCAGCCGGTAT CCATGTCGTGACACCGAATAAACAGGCTGGCTCCGGCCCCCTGCATCGCTACCACGCGATTCGTGCAGCAGCAGATGCCA GCGGCGCACGCTTTCGCTATGAAGCCACAGTGGGCGCAGGCTTACCGGTGATTACGACATTGCGTGACTTGATGGATACC GGTGATAGCGTCACCTCAATCGAAGGGATCTTTTCCGGAACTCTGGCGTGGCTATTCAATAAATATGATGGCAGCGTCCC ATTCTCCCAATTAATCGCCCAGGCGCGAGCGATGGGATATACCGAGCCGGATCCACGCGATGACCTGTCTGGGGTTGACG TGGCGCGTAAGCTGGTGATTCTGGCGCGCGATGCGGGGCGTGATATCAGCCTAGAAGATGTTGCGGTAGAAAGCCTGGTG CCGGAGACATTGTGTCAACTCAGCGTTGCCGATTTCATGGAACGACTCAATGAAATTGATGCCACCTTTGCAGAGCGTTT GGCTGCGGCCAAACAGCGCGGTTGCGTATTGCGTTACGTCGCACAACTGTCCCCTGGACACGTCCCTAGTGTCAGCTTGA TTGAATTGCCTTCTGACCATGCCTTCGTCAATCTTCGTTTGACCGATAACGTAGTGCAATTTACAACTCGTCGTTATTCC GAAAACCCCTTGATCGTACAGGGCCCTGGCGCCGGTCCAGAGGTCACCGCAGCCGGTGTTTTTGCGGATTTACTGCGAGT TGCAGCGGGCGAGGGCGCACGCTTGTGA
Upstream 100 bases:
>100_bases TCGCGTAACTTCCGAATACTAAGGCCCCGCACCAGAACTCCAGGTTGCGGGTCAAACCCTCAGCCTGATGAGAATGGGGC CTCCATCATGAGGTCTGTTG
Downstream 100 bases:
>100_bases ATCGGACCTTGCAACCAGACAGCGGCGCATCTCAAACAGCGCCCACAGCGCATCAGGCACGCGCCTTCGCACCGGCATCA GTGGCGAACGTTGCCGTTGG
Product: bifunctional aspartokinase I/homoserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 835; Mature: 834
Protein sequence:
>835_residues MSSSAVRLSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQ VLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDC VVLDARQVLVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELH IWTDVDGVMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGS VKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIG HVQRVQLTNNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQT FSIGVIGPGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAH LPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDT GDSVTSIEGIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLV PETLCQLSVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYS ENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Sequences:
>Translated_835_residues MSSSAVRLSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQ VLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDC VVLDARQVLVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELH IWTDVDGVMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGS VKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIG HVQRVQLTNNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQT FSIGVIGPGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAH LPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDT GDSVTSIEGIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLV PETLCQLSVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYS ENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL >Mature_834_residues SSSAVRLSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQV LWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCV VLDARQVLVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHI WTDVDGVMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGSV KGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGH VQRVQLTNNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTF SIGVIGPGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAHL PHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTG DSVTSIEGIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVP ETLCQLSVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYSE NPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=818, Percent_Identity=40.2200488997555, Blast_Score=563, Evalue=1e-161, Organism=Escherichia coli, GI1790376, Length=820, Percent_Identity=34.1463414634146, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1790455, Length=464, Percent_Identity=29.0948275862069, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322599, Length=367, Percent_Identity=38.6920980926431, Blast_Score=222, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6320893, Length=502, Percent_Identity=27.4900398406374, Blast_Score=157, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89758; Mature: 89627
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAVRLSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKG CCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCC VTDTLIALAEQAANHSPDWQVLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEML HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQVLVVSPGEFGAEV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCC DWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELH CCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHEECCCCEE IWTDVDGVMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRN EEECCCCHHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCEEECCCHHHHHHHCCCCEEEEC TFQPGHPGTRITADSVVSGSVKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLS CCCCCCCCCEEEHHHHHCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEE VVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQLTNNISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEEEECCC MAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQT CCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCE FSIGVIGPGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAF EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH AAAPEAVDLDAFTAHLQAAHLPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGP HCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLV HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHH PETLCQLSVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCC AFVNLRLTDNVVQFTTRRYSENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL EEEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSSAVRLSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKG CCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCC VTDTLIALAEQAANHSPDWQVLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEML HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQVLVVSPGEFGAEV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCC DWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELH CCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHEECCCCEE IWTDVDGVMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRN EEECCCCHHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCEEECCCHHHHHHHCCCCEEEEC TFQPGHPGTRITADSVVSGSVKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLS CCCCCCCCCEEEHHHHHCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEE VVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQLTNNISVLAAVGDG EEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEEEEECCC MAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQT CCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCE FSIGVIGPGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAF EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH AAAPEAVDLDAFTAHLQAAHLPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGP HCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCC LHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSIEGIFSGTLAWLFN HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLV HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHH PETLCQLSVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCC AFVNLRLTDNVVQFTTRRYSENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL EEEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7003595; 1630901; 7610040; 9278503; 6277952; 2410621; 387092; 6298218; 390305 [H]