Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is yehU [H]

Identifier: 182681769

GI number: 182681769

Start: 1361025

End: 1362050

Strand: Reverse

Name: yehU [H]

Synonym: XfasM23_1227

Alternate gene names: 182681769

Gene position: 1362050-1361025 (Counterclockwise)

Preceding gene: 182681770

Following gene: 182681768

Centisome position: 53.72

GC content: 51.56

Gene sequence:

>1026_bases
ATGTTGCGTCCGTCTTGGTTGCCGGAGATGTGCCGGGTCCCACGCATTGTGGTATTGCTAGGATTGGCTGAACTTGTTGT
TGTGGTTGCGATGTTGGTGCCTGATCGGGGCAGCGTGTGGTCTGTCTCTCGTTTCCTGTCAGCAAGCGGTATGGCAATGT
GGTTAGCGTTGGTGATTGGCGTGCTCTTATGTGTCTTGCGTCCGTTACTGTTACGTCTTTCTCCGATGTTGGGTAAGTTC
GCGGTGTTGATGGTGGTCAGTACAGTAACCATGTTGGGAACTGGTGTTATGCATGTGTTGTATGTTTCCCTTGGTCAGCG
GCCTATCGCGCCTGAGGTAGGATTTTGGCGTTATACCTTGGGATGTAGCGCCATCACACTACTGATCACAGTTTTGGTGC
TCCACTATTTTTATGTCAATGATCGTTGGGTTGCCCAACTACAGGCGCATGCCCGTGCAGAGGTGAATGCCTTACAGGCA
CGCATCCGCCCCCATTTTCTTTTTAATAGCATGAATCTGATTGCTTGCTTGCTGCGCCGTGATCCGGAAATTGCGGAGCA
GGCAGTATTAGATTTGTGCGATCTGTTCCGTGCTGCTCTTGATGCGGGGGAGCGCGAGTCTAATTTGCGTGAAGAGTGCG
AATTGGCCGAGCGTTATCTTGCGATTGAATCATTACGTTTGGGTGACCGATTGCAGGTACGTTGGAAACGTTTTGAGCCG
CTGCCATGGCAGTTACCGTTGCCGCGTTTGGTGTTGCAACCGTTATTGGAAAACGCCATTTTGCATGGCATTTCCCAGTT
ACCTTCCGGTGGCTGTGTGGAGGTAAGCATATGTTGCGAAGCGCAGCGTTTATATATCCGTATTGTGAATCCGGCACCGT
CTCCACAGCGGCTGGCTGCAGGAGCAGGGCATGCACAGGCCAGCATTGCGCATCGTCTTGGTTACCGCTTTGGTCCTGAT
GCTCGAATGACGGGGTTTTGGAGTGGAGGTTACTATTCCTGCGATATCGTATTGCCGTTGATATGA

Upstream 100 bases:

>100_bases
CATCAGGTTTGCCAAGAGGAGATCCAGGCCTTGGGAGACTGGTTAGAGCGCCGTTTTGCGATTTCTTCTTAACTGAGCTG
CTTTTGTGCCGCAATCATTG

Downstream 100 bases:

>100_bases
TAGGGTTGATTGGGAGGTTTTCAGTTTGCTGCGTATATTGATTGCCGATGATGAGCCGCTTGCGCGTGAGCGGCTGCGTG
TGTTGCTGCAAGCACAAATG

Product: histidine kinase internal region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF
AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA
RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP
LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD
ARMTGFWSGGYYSCDIVLPLI

Sequences:

>Translated_341_residues
MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF
AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA
RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP
LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD
ARMTGFWSGGYYSCDIVLPLI
>Mature_341_residues
MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIGVLLCVLRPLLLRLSPMLGKF
AVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTLGCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQA
RIRPHFLFNSMNLIACLLRRDPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP
LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAAGAGHAQASIAHRLGYRFGPD
ARMTGFWSGGYYSCDIVLPLI

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788446, Length=170, Percent_Identity=38.8235294117647, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788723, Length=148, Percent_Identity=34.4594594594595, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 38056; Mature: 38056

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH
VLLCVLRPLLLRLSPMLGKFAVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
GCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQARIRPHFLFNSMNLIACLLRR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHC
GAGHAQASIAHRLGYRFGPDARMTGFWSGGYYSCDIVLPLI
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MLRPSWLPEMCRVPRIVVLLGLAELVVVVAMLVPDRGSVWSVSRFLSASGMAMWLALVIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHH
VLLCVLRPLLLRLSPMLGKFAVLMVVSTVTMLGTGVMHVLYVSLGQRPIAPEVGFWRYTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
GCSAITLLITVLVLHYFYVNDRWVAQLQAHARAEVNALQARIRPHFLFNSMNLIACLLRR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPEIAEQAVLDLCDLFRAALDAGERESNLREECELAERYLAIESLRLGDRLQVRWKRFEP
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
LPWQLPLPRLVLQPLLENAILHGISQLPSGGCVEVSICCEAQRLYIRIVNPAPSPQRLAA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHC
GAGHAQASIAHRLGYRFGPDARMTGFWSGGYYSCDIVLPLI
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]