| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681750
Identifier: 182681750
GI number: 182681750
Start: 1337713
End: 1338159
Strand: Reverse
Name: 182681750
Synonym: XfasM23_1208
Alternate gene names: NA
Gene position: 1338159-1337713 (Counterclockwise)
Preceding gene: 182681756
Following gene: 182681740
Centisome position: 52.77
GC content: 50.56
Gene sequence:
>447_bases GTGACATCCGTAGCGTTCGATACGCTTAAATTTGCGAACCGGCTGAAAACGGCAGGGGTTCCCGCGGCCCACGCAGAGGC CGAAGCCGAAGCCTTGGCCGAAGTGCTAGAAATAAATTTACAAGGCCTTGCTGAGTCTGAATCTAAAAACGGCAAGGCAT TAGCGCGCCTTGAAGCCGATATGAAGGAAGGCTTTGCGCAGGTGAATACGCGCTTTGCGCAAGTTGACCAGCGCTTTGAG AAAATAGACCAGCGCTTTGCGCAGGTTGACCAGCGCTTTGAACAAATCGCTAAAGATTTTGCACAGCTGGATAAAAACAT GGACCAGCGCTTCGCCCAAGTAGACCAACGCTTCGTTGAAATAAAAGGCGAAATGCTGCTACTTAAATGGATGTTTGGGG CCCTCGTAGGCGGTGTGACTGCACTGATCATCAAAGCGTTTTTCTGA
Upstream 100 bases:
>100_bases AGGGGCGCAGGTTCATGCCAACGCTCCGTGCAGCACTTCAGGATGGGTGGGAGGCACGCTGCTATACTCGCCACCACATG GAGCTAAAGCGGGGTTATGT
Downstream 100 bases:
>100_bases GTCACGCCAGCACCTCATCCACGCCTTTTAAGGAATCGACCACGACCACGCGCTGGCCCATGCCGCGCATGCGCTCATGC TCACGGACTTGATGCGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLEINLQGLAESESKNGKALARLEADMKEGFAQVNTRFAQVDQRFE KIDQRFAQVDQRFEQIAKDFAQLDKNMDQRFAQVDQRFVEIKGEMLLLKWMFGALVGGVTALIIKAFF
Sequences:
>Translated_148_residues MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLEINLQGLAESESKNGKALARLEADMKEGFAQVNTRFAQVDQRFE KIDQRFAQVDQRFEQIAKDFAQLDKNMDQRFAQVDQRFVEIKGEMLLLKWMFGALVGGVTALIIKAFF >Mature_147_residues TSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLEINLQGLAESESKNGKALARLEADMKEGFAQVNTRFAQVDQRFEK IDQRFAQVDQRFEQIAKDFAQLDKNMDQRFAQVDQRFVEIKGEMLLLKWMFGALVGGVTALIIKAFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16602; Mature: 16471
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLEINLQGLAESESKNGKALARLEAD CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MKEGFAQVNTRFAQVDQRFEKIDQRFAQVDQRFEQIAKDFAQLDKNMDQRFAQVDQRFVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKGEMLLLKWMFGALVGGVTALIIKAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLEINLQGLAESESKNGKALARLEAD CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MKEGFAQVNTRFAQVDQRFEKIDQRFAQVDQRFEQIAKDFAQLDKNMDQRFAQVDQRFVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKGEMLLLKWMFGALVGGVTALIIKAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA