| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681740
Identifier: 182681740
GI number: 182681740
Start: 1329915
End: 1330397
Strand: Reverse
Name: 182681740
Synonym: XfasM23_1198
Alternate gene names: NA
Gene position: 1330397-1329915 (Counterclockwise)
Preceding gene: 182681750
Following gene: 182681733
Centisome position: 52.47
GC content: 48.45
Gene sequence:
>483_bases ATGAACACAGCAGCGCCAGAAGCACGCACTAAATATGAAGCTGAGTTTGATTTGGCGTATCACGTTCGCTTGTACGAACG GCATATCCGGTTTTATTGCAGGCTCCGCAAGCTGTTTGTTTTTTCCAGTGTCCTTGCTGGAACGGTTGCGATTGGTAATG TTGTGAGTGGATTGCCTTGGTTGGTTTCGCTGCTGAGTGTGGTTGTTGCGGTGGCTGGATTGGCTGATCTTGTCTTTGAT TTGAGCAATCAGACTGTTGCGTATGAACATCAACGTCGTAAATGCGTGGAGCTTCAGGTGGAGCAGTCGGTATTGACGTT GGAGGAGCTTGATAGCCAGATGCGGAAAATTCTTATAGATGCCCCACCAGAAATTGAGGCACTCAGGATGCCTTCTTACA ATGATGTTCTTCGCACACTCGGCCATGTTGCACGTGTGCAACCGCTTACACGTGTTGAGCGCGTGTTGGATAAAATTGCC TGA
Upstream 100 bases:
>100_bases GATTTTGAGAAAAGGTCAGGCGTTCCCGTACGCGGACCAACGCAGCCCCCCCCAGCGCCCATACCCCAGCCACCACCGGC AGAAAAACAGTGAGGAACTC
Downstream 100 bases:
>100_bases ATCCTTTTTATGCGGTTGCAGGCGTGGGTCGCTGTAGCTGCTATATCCAATGCCAGTCATGACTCACCTGCCTTTGGTGT AGCAATGGCGTCAGTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNTAAPEARTKYEAEFDLAYHVRLYERHIRFYCRLRKLFVFSSVLAGTVAIGNVVSGLPWLVSLLSVVVAVAGLADLVFD LSNQTVAYEHQRRKCVELQVEQSVLTLEELDSQMRKILIDAPPEIEALRMPSYNDVLRTLGHVARVQPLTRVERVLDKIA
Sequences:
>Translated_160_residues MNTAAPEARTKYEAEFDLAYHVRLYERHIRFYCRLRKLFVFSSVLAGTVAIGNVVSGLPWLVSLLSVVVAVAGLADLVFD LSNQTVAYEHQRRKCVELQVEQSVLTLEELDSQMRKILIDAPPEIEALRMPSYNDVLRTLGHVARVQPLTRVERVLDKIA >Mature_160_residues MNTAAPEARTKYEAEFDLAYHVRLYERHIRFYCRLRKLFVFSSVLAGTVAIGNVVSGLPWLVSLLSVVVAVAGLADLVFD LSNQTVAYEHQRRKCVELQVEQSVLTLEELDSQMRKILIDAPPEIEALRMPSYNDVLRTLGHVARVQPLTRVERVLDKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18151; Mature: 18151
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAAPEARTKYEAEFDLAYHVRLYERHIRFYCRLRKLFVFSSVLAGTVAIGNVVSGLPW CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVSLLSVVVAVAGLADLVFDLSNQTVAYEHQRRKCVELQVEQSVLTLEELDSQMRKILID HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APPEIEALRMPSYNDVLRTLGHVARVQPLTRVERVLDKIA CCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MNTAAPEARTKYEAEFDLAYHVRLYERHIRFYCRLRKLFVFSSVLAGTVAIGNVVSGLPW CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVSLLSVVVAVAGLADLVFDLSNQTVAYEHQRRKCVELQVEQSVLTLEELDSQMRKILID HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APPEIEALRMPSYNDVLRTLGHVARVQPLTRVERVLDKIA CCCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA