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The map label for this gene is glyQ

Identifier: 182681437

GI number: 182681437

Start: 1050791

End: 1051714

Strand: Direct

Name: glyQ

Synonym: XfasM23_0888

Alternate gene names: 182681437

Gene position: 1050791-1051714 (Clockwise)

Preceding gene: 182681436

Following gene: 182681438

Centisome position: 41.44

GC content: 52.49

Gene sequence:

>924_bases
ATGTCTGATTCTCGGGGTGTACTGTCTATTTCTACCAGCACAACCTTTCAGGGTTTGATCCAGACTCTCAATCGGTACTG
GGCAGAGCAGGGGTGCGTGTTGGTTCAACCGCTAGATCTGGAAGTAGGGGCCGGGACATTTCATCCGGCCACCTTTTTGC
GTGCGTTGGGTCCGGAACCGTGGAATGCTGCTTATGTGCAGCCTAGTCGGCGTCCGACCGATGGCCGCTATGGGGAAAAT
CCGAATCGTTTGCAGCGTTATTATCAATATCAGGTTGCAATGAAACCCAACCCTGACAACCTTCAGGAGTTGTATTTGGC
TTCATTACAGGCCTTGGGTATCGATCCGTTGGTGCATGATGTGCGCTTTGTTGAGGACAACTGGGAGTCCCCGACATTGG
GCGCTTGGGGCCTTGGTTGGGAGGTCTGGCTCAATGGCATGGAGGTGACGCAGTTTACGTATTTTCAGCAAGCTGGCGGG
CTGGAATGTAAGCCCGTTTTGGGTGAGGTCACTTACGGGTTGGAACGGCTGTGTATGTATTTGCAGAGCTGCGATAACGT
TTACGATCTGGTGTGGACGTATGGCCCGGATGGTACGCCAGTGACGTATGGCGATGTCTACCACCAGAACGAGGTGGAGC
AGAGCGCTTACAATTTCGAGCACGCAAATGTGACTGAGTTACTCCACACTTTCGATGCTTGCGAGCGCGAGGCTAAATCA
TTGGTCGAGGCTGTTTTGCCACTCCCTGCCTATGAGAAGGTGATCAAGGCAAGTCACTGCTTCAATTTACTTGATGCGCG
TCGCACAATTTCTGTCACTGAGCGCCAGCGGTACATTCTTCGGATACGTACACTGTCACAAGAGGTGGCGAAGGCTTATT
ACGCTCAGCGTGAGAAACTGGGTTTTCCGAACTTGAGGCGCTAG

Upstream 100 bases:

>100_bases
CTGCATGGGCTGGGAGTGACTCAATAAGTATCTTGGTCATGAAATAGTGCAGCAGTTCGGTGAGTATACTAATGTCCTGC
TTTCATAAGGCGTTTGCTGC

Downstream 100 bases:

>100_bases
TTGCCTCCTTTATCCGTTTTCCGTTTCGAATCACTGTGGTGCGCCGCTAGTTGCCATTCGCGGAAGAAACGGAGACCAAG
GTCCTATTGTCATGACTGAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSDSRGVLSISTSTTFQGLIQTLNRYWAEQGCVLVQPLDLEVGAGTFHPATFLRALGPEPWNAAYVQPSRRPTDGRYGEN
PNRLQRYYQYQVAMKPNPDNLQELYLASLQALGIDPLVHDVRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGG
LECKPVLGEVTYGLERLCMYLQSCDNVYDLVWTYGPDGTPVTYGDVYHQNEVEQSAYNFEHANVTELLHTFDACEREAKS
LVEAVLPLPAYEKVIKASHCFNLLDARRTISVTERQRYILRIRTLSQEVAKAYYAQREKLGFPNLRR

Sequences:

>Translated_307_residues
MSDSRGVLSISTSTTFQGLIQTLNRYWAEQGCVLVQPLDLEVGAGTFHPATFLRALGPEPWNAAYVQPSRRPTDGRYGEN
PNRLQRYYQYQVAMKPNPDNLQELYLASLQALGIDPLVHDVRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGG
LECKPVLGEVTYGLERLCMYLQSCDNVYDLVWTYGPDGTPVTYGDVYHQNEVEQSAYNFEHANVTELLHTFDACEREAKS
LVEAVLPLPAYEKVIKASHCFNLLDARRTISVTERQRYILRIRTLSQEVAKAYYAQREKLGFPNLRR
>Mature_306_residues
SDSRGVLSISTSTTFQGLIQTLNRYWAEQGCVLVQPLDLEVGAGTFHPATFLRALGPEPWNAAYVQPSRRPTDGRYGENP
NRLQRYYQYQVAMKPNPDNLQELYLASLQALGIDPLVHDVRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGL
ECKPVLGEVTYGLERLCMYLQSCDNVYDLVWTYGPDGTPVTYGDVYHQNEVEQSAYNFEHANVTELLHTFDACEREAKSL
VEAVLPLPAYEKVIKASHCFNLLDARRTISVTERQRYILRIRTLSQEVAKAYYAQREKLGFPNLRR

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=293, Percent_Identity=74.061433447099, Blast_Score=458, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_XYLF2 (B2I4M8)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001829597.1
- ProteinModelPortal:   B2I4M8
- SMR:   B2I4M8
- GeneID:   6203614
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0888
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 35064; Mature: 34933

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSRGVLSISTSTTFQGLIQTLNRYWAEQGCVLVQPLDLEVGAGTFHPATFLRALGPEP
CCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHCCCC
WNAAYVQPSRRPTDGRYGENPNRLQRYYQYQVAMKPNPDNLQELYLASLQALGIDPLVHD
CCCEEECCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCHHHHH
VRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGLECKPVLGEVTYGLERLCMY
HHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LQSCDNVYDLVWTYGPDGTPVTYGDVYHQNEVEQSAYNFEHANVTELLHTFDACEREAKS
HHHCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVEAVLPLPAYEKVIKASHCFNLLDARRTISVTERQRYILRIRTLSQEVAKAYYAQREKL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPNLRR
CCCCCCC
>Mature Secondary Structure 
SDSRGVLSISTSTTFQGLIQTLNRYWAEQGCVLVQPLDLEVGAGTFHPATFLRALGPEP
CCCCCEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHCCCC
WNAAYVQPSRRPTDGRYGENPNRLQRYYQYQVAMKPNPDNLQELYLASLQALGIDPLVHD
CCCEEECCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCCCHHHHH
VRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQAGGLECKPVLGEVTYGLERLCMY
HHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LQSCDNVYDLVWTYGPDGTPVTYGDVYHQNEVEQSAYNFEHANVTELLHTFDACEREAKS
HHHCCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LVEAVLPLPAYEKVIKASHCFNLLDARRTISVTERQRYILRIRTLSQEVAKAYYAQREKL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPNLRR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA