| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is caiE [C]
Identifier: 182681378
GI number: 182681378
Start: 972459
End: 973019
Strand: Direct
Name: caiE [C]
Synonym: XfasM23_0826
Alternate gene names: 182681378
Gene position: 972459-973019 (Clockwise)
Preceding gene: 182681377
Following gene: 182681381
Centisome position: 38.35
GC content: 51.69
Gene sequence:
>561_bases ATGATCCGTAAAAATCCGCGGGGAGACCTGCCAGATGTTCATGAAAGTGCTTTTGTTGATCCTACTGCCATCTTATGTGG TTGTGTCATTGTTGAGGCTGGTGTTTTTATTGGCCCGTATGCAGTCATCCGTGCGGATGAGACTACGGCTGAGGGAGACA TTAATCCAATTCGTATTGGTATTGGTGCCAACATCCAGGATGGGGTGGTGATTCATTCTAAGTCTGGTGCCGCGGTGACG ATCGGTGCACGTACTTCAATTGCGCATCGGGCGATCGTGCATGGGCCGTGTACGATCGGTGAGCGTGTGTTCATTGGCTT CAACAGTGTGTTGTTCAACTGTGTCGTTGGTGATGGTTGCGTCGTTCGGCACAATGCTGTGGTTGATGGGTGTGATTTGC CTCCTGGCTTCTACGTCCCTTCCACCGAGCGTATTGGGCCAAGTACCGACCTTGGCACAATACCAAGAGTTACTGTGGCT GCCTCCGAGTTTTCTGAAGATGTGGCGCAAACCAATAACCGGCTTGTTGAGGGTTACCGCCGTCTGCGCAACGAGTTGTA G
Upstream 100 bases:
>100_bases ATGCGGTTGCCAGTACCGCAGATGAGTGATCGAACTGATCTATGTTCAACTCAACAGGCATGCAGTAGCCCTTTCTGATT CTCACCACAACCGCTGTCAT
Downstream 100 bases:
>100_bases GCTTCATTTCTTTCCAGAAAGCACGAAGCCCCTGTCTTATGACCGGGGCTTGCTTCCTAGTGCTGTTCAAACGATCAGAA TCAGCGATTCTGAAGATGTC
Product: hexapaptide repeat-containing transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIRKNPRGDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTAEGDINPIRIGIGANIQDGVVIHSKSGAAVT IGARTSIAHRAIVHGPCTIGERVFIGFNSVLFNCVVGDGCVVRHNAVVDGCDLPPGFYVPSTERIGPSTDLGTIPRVTVA ASEFSEDVAQTNNRLVEGYRRLRNEL
Sequences:
>Translated_186_residues MIRKNPRGDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTAEGDINPIRIGIGANIQDGVVIHSKSGAAVT IGARTSIAHRAIVHGPCTIGERVFIGFNSVLFNCVVGDGCVVRHNAVVDGCDLPPGFYVPSTERIGPSTDLGTIPRVTVA ASEFSEDVAQTNNRLVEGYRRLRNEL >Mature_186_residues MIRKNPRGDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTAEGDINPIRIGIGANIQDGVVIHSKSGAAVT IGARTSIAHRAIVHGPCTIGERVFIGFNSVLFNCVVGDGCVVRHNAVVDGCDLPPGFYVPSTERIGPSTDLGTIPRVTVA ASEFSEDVAQTNNRLVEGYRRLRNEL
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI87081681, Length=116, Percent_Identity=42.2413793103448, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1787667, Length=133, Percent_Identity=36.8421052631579, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI87082240, Length=148, Percent_Identity=31.0810810810811, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19722; Mature: 19722
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00014 ER_TARGET ; PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNPRGDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTAEGDINPIRIG CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCCCEEEEE IGANIQDGVVIHSKSGAAVTIGARTSIAHRAIVHGPCTIGERVFIGFNSVLFNCVVGDGC ECCCCCCCEEEECCCCCEEEEECCCCHHHHEEEECCCCCCCEEEEEHHHHEEEEEECCCE VVRHNAVVDGCDLPPGFYVPSTERIGPSTDLGTIPRVTVAASEFSEDVAQTNNRLVEGYR EEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RLRNEL HHHHCC >Mature Secondary Structure MIRKNPRGDLPDVHESAFVDPTAILCGCVIVEAGVFIGPYAVIRADETTAEGDINPIRIG CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCEECCEEEEEECCCCCCCCCCEEEEE IGANIQDGVVIHSKSGAAVTIGARTSIAHRAIVHGPCTIGERVFIGFNSVLFNCVVGDGC ECCCCCCCEEEECCCCCEEEEECCCCHHHHEEEECCCCCCCEEEEEHHHHEEEEEECCCE VVRHNAVVDGCDLPPGFYVPSTERIGPSTDLGTIPRVTVAASEFSEDVAQTNNRLVEGYR EEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH RLRNEL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]