| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is yeaZ [H]
Identifier: 182681337
GI number: 182681337
Start: 932273
End: 932962
Strand: Direct
Name: yeaZ [H]
Synonym: XfasM23_0784
Alternate gene names: 182681337
Gene position: 932273-932962 (Clockwise)
Preceding gene: 182681336
Following gene: 182681338
Centisome position: 36.77
GC content: 55.8
Gene sequence:
>690_bases ATGAAGCTGCTTGCCTTCGAAACGTCCACTGAGGCATGTTCGGTTGCCGTGCAGGTCGATGGGTGTGTTTTGGAGCGTTT TGAAATTGCGCCTCGTCGCCATGCTGAACTCGTATTGTCATGGGCTGAGCAGCTCTTGGCCGAGGCGGGCATCAGTCGTC GGCAGCTTGATGCGATTGCACTTGGGTGCGGCCCAGGTGCCTTCACTGGTGTGCGTCTGGGGATCAGTCTGGCCCAGGGG ATTGCGTTGGCTTTGGATAAGCCTTTATTACCCATCTCGACTCTGCACGTCCTTGCCATGCGTGCCTTGCCCGATGCACC ACGTGTGCTGGCGACCATTGATGCTCGTATGGGTGAGGTATATGCCGCAATTTTCGTGCGATGTAACGGCATACTGGTGC CGAGTGGCCCAGAAGGTGTTTGCGTACCGGATAGCATCGTATTACCGGGAAGTGATCGTGATTGGCATGCAGTCGGTACC GGCCTTGCAGCAAGTCATGGCTTACTGCAGCGGTGTCTGGCGTCGCGGTTGGCAGCTACTGATGCGTTTGCTATGCCGCA CGCAGGTGATGTCTTGGCTTTGGCAATATCGGTGTTGTCACGTGGCGAGGGTGTTGCTCCAGAATGCGTAGAGCCAGTGT ATTTGCGTAATAACGTTGCTCTTACTCTGAGTCAGCAGCGTGCTATGTAG
Upstream 100 bases:
>100_bases GCGCGAGTCTGTGGGTTACTTACCCGTTGTTATTTTGGAGTCAGGGATGCTTAGATGTTGGTGTTAAGATTGCGGATTAT TTAAGGTTTCTTGCTCTTTC
Downstream 100 bases:
>100_bases GTGTCTGATTGAGTAGTGTGTCTGCATGTTACCGCAGTACCTTCTGCTCTCAATCGCTGTTGAATACGTTCAGCTAGCCA ATTTGCGATATGGGCAGCTT
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKLLAFETSTEACSVAVQVDGCVLERFEIAPRRHAELVLSWAEQLLAEAGISRRQLDAIALGCGPGAFTGVRLGISLAQG IALALDKPLLPISTLHVLAMRALPDAPRVLATIDARMGEVYAAIFVRCNGILVPSGPEGVCVPDSIVLPGSDRDWHAVGT GLAASHGLLQRCLASRLAATDAFAMPHAGDVLALAISVLSRGEGVAPECVEPVYLRNNVALTLSQQRAM
Sequences:
>Translated_229_residues MKLLAFETSTEACSVAVQVDGCVLERFEIAPRRHAELVLSWAEQLLAEAGISRRQLDAIALGCGPGAFTGVRLGISLAQG IALALDKPLLPISTLHVLAMRALPDAPRVLATIDARMGEVYAAIFVRCNGILVPSGPEGVCVPDSIVLPGSDRDWHAVGT GLAASHGLLQRCLASRLAATDAFAMPHAGDVLALAISVLSRGEGVAPECVEPVYLRNNVALTLSQQRAM >Mature_229_residues MKLLAFETSTEACSVAVQVDGCVLERFEIAPRRHAELVLSWAEQLLAEAGISRRQLDAIALGCGPGAFTGVRLGISLAQG IALALDKPLLPISTLHVLAMRALPDAPRVLATIDARMGEVYAAIFVRCNGILVPSGPEGVCVPDSIVLPGSDRDWHAVGT GLAASHGLLQRCLASRLAATDAFAMPHAGDVLALAISVLSRGEGVAPECVEPVYLRNNVALTLSQQRAM
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=227, Percent_Identity=43.1718061674009, Blast_Score=154, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 24021; Mature: 24021
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLAFETSTEACSVAVQVDGCVLERFEIAPRRHAELVLSWAEQLLAEAGISRRQLDAIA CEEEEEECCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEE LGCGPGAFTGVRLGISLAQGIALALDKPLLPISTLHVLAMRALPDAPRVLATIDARMGEV EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YAAIFVRCNGILVPSGPEGVCVPDSIVLPGSDRDWHAVGTGLAASHGLLQRCLASRLAAT HHHHHHEECCEEECCCCCCEECCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH DAFAMPHAGDVLALAISVLSRGEGVAPECVEPVYLRNNVALTLSQQRAM HHHCCCCCCHHHHHHHHHHHCCCCCCHHHCCCEEECCCEEEEECCCCCC >Mature Secondary Structure MKLLAFETSTEACSVAVQVDGCVLERFEIAPRRHAELVLSWAEQLLAEAGISRRQLDAIA CEEEEEECCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEE LGCGPGAFTGVRLGISLAQGIALALDKPLLPISTLHVLAMRALPDAPRVLATIDARMGEV EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YAAIFVRCNGILVPSGPEGVCVPDSIVLPGSDRDWHAVGTGLAASHGLLQRCLASRLAAT HHHHHHEECCEEECCCCCCEECCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH DAFAMPHAGDVLALAISVLSRGEGVAPECVEPVYLRNNVALTLSQQRAM HHHCCCCCCHHHHHHHHHHHCCCCCCHHHCCCEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]