| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681314
Identifier: 182681314
GI number: 182681314
Start: 897841
End: 900327
Strand: Direct
Name: 182681314
Synonym: XfasM23_0761
Alternate gene names: NA
Gene position: 897841-900327 (Clockwise)
Preceding gene: 182681313
Following gene: 182681315
Centisome position: 35.41
GC content: 55.01
Gene sequence:
>2487_bases ATGTTTGCGGAACCGCTCGGCAAAACTTCCAGCCTACCTGCCAATATGGCCTTGTCTCCTCGCGCTAGTGTGCTGTTGCA GGGAGTGCTGAACTGTTGCCTGGATAGTTTGGGTCCAGTACTTATGGACACCTTAGCCGCGTTGGAGCAGGAATTGTTTC AGCTCGCCGCGTGCGCGCCCAGCACTCAGCAGCAGGTTGAGCTGTATGTGGATATGAAGCGCCTGCGTGACCGTAAAGAA AGCTTCATACCGTGTTTCTGTGAAGGTTTGGTGCGTGCTTTTGGCGCATTGAACATGCCGTGTGAGCAGATGACAGCTGC TGCACTGCCACTGGCTGAAAATAGCGAGATAGATAGGGACATCGTGTTGCATGACATCGCCGGTCGCAGTGTGGTACGCC ATCTGGATGCGCTTCAGATGCTTGGCCAGCGTTTGGCGGTGTTAGTAGCCATGCCGGCATTCCAGCCCGAGCGGATGCCT ATGGGGCCGCAGCTGCTGTGTCGCATCTTGCGTGAGTGTGGAGAAACATTGGGGCTGAATCCAAACACACAGGTGACGCT ATACCGTGTGTTTGAATCTAAGAGCATGGACCGCTACGGTCACCTGCTTGAGTGTGCCAACCGCCTGCTGGATCAAGCCG GTATCTTGCCCAGGTTGGTTTCTCTGCCCGAGGCGGCGCGTTCAGTGTTACCGCGTCCACACGATCTGCCTGGTAATCCT GCCGACACGGTGATGTGTTCGACCGAATGGTGCAACGCGACGCTGGCGCCGCGTTGCACCCCAGTGACTGCACAAGGCGT GAATGTAGCCCAGCTGCCAGCGGTACCTCAGTGTTCCACGATCACGAATGGAACGGGTGTTGATAGTGATGTGGGCACTG ATACAACGTTCCCATCGGTTGCCCCTGATCTCAGCCAGATGTCTGATGTACTCCAGACCCGCATGTCCACTTTATTCTTA CCTTCTGGAGCAGGCGGTGAGACTGTTTTATGTCCACCAGGGGTTCAGCTCAACGGGCAATTTGCTGTGATGCCGAGTGC GTTTCCTGGGTACAAGATGAAGATGAGCCAGGTCTTCACCTTCCCTTCCGATACAGAGATTAAAAGTAATCAATCTTCTG ATGCCCCTCAGGCCAGGACATTGACTCCATTTTCTGCATCGTACCTGTCAGGTATGGACTTGAATCAGTTGCTCAGCGCG TTACAGGCTCGTATCGCTGCGACTTCCCCTCGCGGTGGTGCTTGGCGCAGTGTGCGTGAGTTACGTCAGCACGTGCTGGT TAACATACGTGCCCGATATGGGGTAGCAGCCGTCTTGTCGGCACAGGATGAGCACGTTTTCGAACTCATTGACATGTTGT ACAGCGAGATAGAACGCGAGGTCCGTGGCAGTAGCACCGTGGCAGATTTGCTGACACGGTTGCAAGTGCCGGTGCTGCGT GCGGCCTTGCGGGACCCCAGATTCTTCGTCCGCGATCAGCATCCAGCACGCGAATTGCTCAATGTTATTGCTGAATCTGC CTCCACTTGGCTCGGTGATGAAGAGCTTGACCCGCAATTATTGCAACTTCTCAACAGCGCCGTGGACAAGGTGCTGCATG AGTATCAGGGTGAAGAAGCGGTGTTTGTTCAAGCGTATCAGGACATCCAAGTCGGCTATTGTGCACAGGTGCATCGGGTA GCGGTCACCGAGCGTCACTATATTGAAGCCGCACGCGATCAAGAACGCTTGGCGCTTGCCAAGCGCCAAGCGACTGAAAC CATCGAACTCCTGTGTGCCGTTGCTCCGCCGCCCCGTTTTGTGAAGACTCTGCTGCGTCAGGCATGGTTAGACGTATTGA CGCTGAGTGTGTTGCGTCAAGGAAAAGAGTCGCCTGAATGGCAGGAACATGAAGCATTGACCGAGCGCATTTGTGCGATC ACTTCCACCCCAGCCGGTGGTGCCAGTGATCTTGTGTTGAGGGAACAGGTCGAGCAATCCTTGTACCACGTTGGTTATGG CAACATTGAGGCCAGCGCGATTGCACGCCGCTTATCTACACCAGACGGTGAGGATGAATTGATGTCCCGGACCGAATTGG CAGCGCGACTGAAGCACCACACCAGGTTTGGTGAGCAGATTGAACCAAGGCCATTACAGGAGACTATCCTGCCTCGTAAC ACCGTTGAAGAAACATGTTACGCACAGTTGCGCACGTTGCCGTTTGGTACCTGGTTGGAGTTTGTGATGAATCAGCAAGG TGACGTGCGTCGTCAGCGCTTGTGTTGGTACAGTCCGGTGACAGACCATGTCTTGCTCGTCAACCCACGTGGACAAAAGA GCACCGAACACACGCTGGACACGCTTGCACGGCTGCTTGCAAACGGTCAGCTTCGTATCTTCACTGAAGAAGAGGGGCGG TTGATTGACCGCGCGTGGAGTGCAACGCTGCGTGCGCTGCGTCACCTACTCGGTGCGCGAGATACTTTTGAGAATCTCCA CGCATGA
Upstream 100 bases:
>100_bases TAACGATGTCATCAACTTATTCAATGAATAAGCGGTGCATGGCCTCTTTGCCAGAAACGTGCTAGAAATGTGCGGTTTAT CAAAGTATTGATTACATCGG
Downstream 100 bases:
>100_bases TTCATGAATCTCGCCGTACACTGCGCCGCCAAGTATCCGGACGCATTGGCGTTCTCGACATGGTGGCTGAGCACATGATT GGCCAGCTCAGCAACCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MFAEPLGKTSSLPANMALSPRASVLLQGVLNCCLDSLGPVLMDTLAALEQELFQLAACAPSTQQQVELYVDMKRLRDRKE SFIPCFCEGLVRAFGALNMPCEQMTAAALPLAENSEIDRDIVLHDIAGRSVVRHLDALQMLGQRLAVLVAMPAFQPERMP MGPQLLCRILRECGETLGLNPNTQVTLYRVFESKSMDRYGHLLECANRLLDQAGILPRLVSLPEAARSVLPRPHDLPGNP ADTVMCSTEWCNATLAPRCTPVTAQGVNVAQLPAVPQCSTITNGTGVDSDVGTDTTFPSVAPDLSQMSDVLQTRMSTLFL PSGAGGETVLCPPGVQLNGQFAVMPSAFPGYKMKMSQVFTFPSDTEIKSNQSSDAPQARTLTPFSASYLSGMDLNQLLSA LQARIAATSPRGGAWRSVRELRQHVLVNIRARYGVAAVLSAQDEHVFELIDMLYSEIEREVRGSSTVADLLTRLQVPVLR AALRDPRFFVRDQHPARELLNVIAESASTWLGDEELDPQLLQLLNSAVDKVLHEYQGEEAVFVQAYQDIQVGYCAQVHRV AVTERHYIEAARDQERLALAKRQATETIELLCAVAPPPRFVKTLLRQAWLDVLTLSVLRQGKESPEWQEHEALTERICAI TSTPAGGASDLVLREQVEQSLYHVGYGNIEASAIARRLSTPDGEDELMSRTELAARLKHHTRFGEQIEPRPLQETILPRN TVEETCYAQLRTLPFGTWLEFVMNQQGDVRRQRLCWYSPVTDHVLLVNPRGQKSTEHTLDTLARLLANGQLRIFTEEEGR LIDRAWSATLRALRHLLGARDTFENLHA
Sequences:
>Translated_828_residues MFAEPLGKTSSLPANMALSPRASVLLQGVLNCCLDSLGPVLMDTLAALEQELFQLAACAPSTQQQVELYVDMKRLRDRKE SFIPCFCEGLVRAFGALNMPCEQMTAAALPLAENSEIDRDIVLHDIAGRSVVRHLDALQMLGQRLAVLVAMPAFQPERMP MGPQLLCRILRECGETLGLNPNTQVTLYRVFESKSMDRYGHLLECANRLLDQAGILPRLVSLPEAARSVLPRPHDLPGNP ADTVMCSTEWCNATLAPRCTPVTAQGVNVAQLPAVPQCSTITNGTGVDSDVGTDTTFPSVAPDLSQMSDVLQTRMSTLFL PSGAGGETVLCPPGVQLNGQFAVMPSAFPGYKMKMSQVFTFPSDTEIKSNQSSDAPQARTLTPFSASYLSGMDLNQLLSA LQARIAATSPRGGAWRSVRELRQHVLVNIRARYGVAAVLSAQDEHVFELIDMLYSEIEREVRGSSTVADLLTRLQVPVLR AALRDPRFFVRDQHPARELLNVIAESASTWLGDEELDPQLLQLLNSAVDKVLHEYQGEEAVFVQAYQDIQVGYCAQVHRV AVTERHYIEAARDQERLALAKRQATETIELLCAVAPPPRFVKTLLRQAWLDVLTLSVLRQGKESPEWQEHEALTERICAI TSTPAGGASDLVLREQVEQSLYHVGYGNIEASAIARRLSTPDGEDELMSRTELAARLKHHTRFGEQIEPRPLQETILPRN TVEETCYAQLRTLPFGTWLEFVMNQQGDVRRQRLCWYSPVTDHVLLVNPRGQKSTEHTLDTLARLLANGQLRIFTEEEGR LIDRAWSATLRALRHLLGARDTFENLHA >Mature_828_residues MFAEPLGKTSSLPANMALSPRASVLLQGVLNCCLDSLGPVLMDTLAALEQELFQLAACAPSTQQQVELYVDMKRLRDRKE SFIPCFCEGLVRAFGALNMPCEQMTAAALPLAENSEIDRDIVLHDIAGRSVVRHLDALQMLGQRLAVLVAMPAFQPERMP MGPQLLCRILRECGETLGLNPNTQVTLYRVFESKSMDRYGHLLECANRLLDQAGILPRLVSLPEAARSVLPRPHDLPGNP ADTVMCSTEWCNATLAPRCTPVTAQGVNVAQLPAVPQCSTITNGTGVDSDVGTDTTFPSVAPDLSQMSDVLQTRMSTLFL PSGAGGETVLCPPGVQLNGQFAVMPSAFPGYKMKMSQVFTFPSDTEIKSNQSSDAPQARTLTPFSASYLSGMDLNQLLSA LQARIAATSPRGGAWRSVRELRQHVLVNIRARYGVAAVLSAQDEHVFELIDMLYSEIEREVRGSSTVADLLTRLQVPVLR AALRDPRFFVRDQHPARELLNVIAESASTWLGDEELDPQLLQLLNSAVDKVLHEYQGEEAVFVQAYQDIQVGYCAQVHRV AVTERHYIEAARDQERLALAKRQATETIELLCAVAPPPRFVKTLLRQAWLDVLTLSVLRQGKESPEWQEHEALTERICAI TSTPAGGASDLVLREQVEQSLYHVGYGNIEASAIARRLSTPDGEDELMSRTELAARLKHHTRFGEQIEPRPLQETILPRN TVEETCYAQLRTLPFGTWLEFVMNQQGDVRRQRLCWYSPVTDHVLLVNPRGQKSTEHTLDTLARLLANGQLRIFTEEEGR LIDRAWSATLRALRHLLGARDTFENLHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91730; Mature: 91730
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAEPLGKTSSLPANMALSPRASVLLQGVLNCCLDSLGPVLMDTLAALEQELFQLAACAP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STQQQVELYVDMKRLRDRKESFIPCFCEGLVRAFGALNMPCEQMTAAALPLAENSEIDRD CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH IVLHDIAGRSVVRHLDALQMLGQRLAVLVAMPAFQPERMPMGPQLLCRILRECGETLGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PNTQVTLYRVFESKSMDRYGHLLECANRLLDQAGILPRLVSLPEAARSVLPRPHDLPGNP CCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHCCCCCCCCCCC ADTVMCSTEWCNATLAPRCTPVTAQGVNVAQLPAVPQCSTITNGTGVDSDVGTDTTFPSV CCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDLSQMSDVLQTRMSTLFLPSGAGGETVLCPPGVQLNGQFAVMPSAFPGYKMKMSQVFT CCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCEECCEEEECCCCCCCCCEEHHHHEE FPSDTEIKSNQSSDAPQARTLTPFSASYLSGMDLNQLLSALQARIAATSPRGGAWRSVRE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH LRQHVLVNIRARYGVAAVLSAQDEHVFELIDMLYSEIEREVRGSSTVADLLTRLQVPVLR HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AALRDPRFFVRDQHPARELLNVIAESASTWLGDEELDPQLLQLLNSAVDKVLHEYQGEEA HHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE VFVQAYQDIQVGYCAQVHRVAVTERHYIEAARDQERLALAKRQATETIELLCAVAPPPRF EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VKTLLRQAWLDVLTLSVLRQGKESPEWQEHEALTERICAITSTPAGGASDLVLREQVEQS HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LYHVGYGNIEASAIARRLSTPDGEDELMSRTELAARLKHHTRFGEQIEPRPLQETILPRN HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC TVEETCYAQLRTLPFGTWLEFVMNQQGDVRRQRLCWYSPVTDHVLLVNPRGQKSTEHTLD HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEECCCCCCCHHHHHH TLARLLANGQLRIFTEEEGRLIDRAWSATLRALRHLLGARDTFENLHA HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MFAEPLGKTSSLPANMALSPRASVLLQGVLNCCLDSLGPVLMDTLAALEQELFQLAACAP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC STQQQVELYVDMKRLRDRKESFIPCFCEGLVRAFGALNMPCEQMTAAALPLAENSEIDRD CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHH IVLHDIAGRSVVRHLDALQMLGQRLAVLVAMPAFQPERMPMGPQLLCRILRECGETLGLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PNTQVTLYRVFESKSMDRYGHLLECANRLLDQAGILPRLVSLPEAARSVLPRPHDLPGNP CCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHCCCCCCCCCCC ADTVMCSTEWCNATLAPRCTPVTAQGVNVAQLPAVPQCSTITNGTGVDSDVGTDTTFPSV CCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APDLSQMSDVLQTRMSTLFLPSGAGGETVLCPPGVQLNGQFAVMPSAFPGYKMKMSQVFT CCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCEECCEEEECCCCCCCCCEEHHHHEE FPSDTEIKSNQSSDAPQARTLTPFSASYLSGMDLNQLLSALQARIAATSPRGGAWRSVRE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH LRQHVLVNIRARYGVAAVLSAQDEHVFELIDMLYSEIEREVRGSSTVADLLTRLQVPVLR HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AALRDPRFFVRDQHPARELLNVIAESASTWLGDEELDPQLLQLLNSAVDKVLHEYQGEEA HHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE VFVQAYQDIQVGYCAQVHRVAVTERHYIEAARDQERLALAKRQATETIELLCAVAPPPRF EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VKTLLRQAWLDVLTLSVLRQGKESPEWQEHEALTERICAITSTPAGGASDLVLREQVEQS HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LYHVGYGNIEASAIARRLSTPDGEDELMSRTELAARLKHHTRFGEQIEPRPLQETILPRN HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC TVEETCYAQLRTLPFGTWLEFVMNQQGDVRRQRLCWYSPVTDHVLLVNPRGQKSTEHTLD HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEECCCCCCCHHHHHH TLARLLANGQLRIFTEEEGRLIDRAWSATLRALRHLLGARDTFENLHA HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA