Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182680426

Identifier: 182680426

GI number: 182680426

Start: 4006260

End: 4006715

Strand: Reverse

Name: 182680426

Synonym: Bind_3526

Alternate gene names: NA

Gene position: 4006715-4006260 (Counterclockwise)

Preceding gene: 182680427

Following gene: 182680422

Centisome position: 96.08

GC content: 58.55

Gene sequence:

>456_bases
TTGACTGGGTTTCTTCTCGACACCAACGTCATTTCGATGCTCTCACCCTCGCGGGCCGAGGCCTCCCCAGTGTTTCTCGA
CTGGCTGGAACGCATGGACAACGAAGGCAGGCTGTTCCTGCCGGTTGTCACGATCCACGAGATCGAAAAGGGGATTACGC
TGCTCGAGCACAAGGGAGCGATTGCAAAGGCGGCGGGCTTGAAGGTCTGGCTCGCCGGTCTGGTTTCCACTTATGACGAC
AAGATCATTGGCCTCGACGCCTCTGCGGCCGCGATTGCCGGACAGTTGGAGGCCAAGGCGATCTCTGCGGGACATGACCC
GGGAATGGCAGACGCTGTCATCGCAGGCATTGCGAAAGCGCATGATCTCCACATTGTCACCTGCAACATGAAGCATTTCT
TGCCATTCGGCATCGCGGTGTCGTTACCAGATGAGGCGGCCGGCCGCACAGGATAA

Upstream 100 bases:

>100_bases
AGGCGATCGAGCGGAAACGCTCCGGCCTTGTCGCCTATCTCAGGACCTTTCCTGGTGGAGAGTTCGAACGTAACCGTGCA
CCCTCGCGGGATGTCGAGCT

Downstream 100 bases:

>100_bases
TGGCGGACGTTTTCAGGGGAGACGGATCACCCTGCGGCTTTCAGTGATTCTTGTTTGACTCCTTCCATTCGGTCTTGGCG
CACTCACGAAGCCTTCGTCC

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Protein-Like; PilT Protein-Like Protein; PilT Protein Domain Protein; Plasmid Stability Protein; PilT Protein N-Terminal; Plasmid-Stability Like Protein; PilT Protein Domain-Containing Protein; PilT Protein N-Terminal Domain Protein; Xin-Antitoxin System Putative Toxin

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDD
KIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG

Sequences:

>Translated_151_residues
MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDD
KIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG
>Mature_150_residues
TGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDDK
IIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15884; Mature: 15752

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGA
CCCEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEECCCC
IAKAAGLKVWLAGLVSTYDDKIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKA
HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCC
HDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG
CCEEEEEECCHHCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGA
CCEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEECCCC
IAKAAGLKVWLAGLVSTYDDKIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKA
HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCC
HDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG
CCEEEEEECCHHCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA