| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680426
Identifier: 182680426
GI number: 182680426
Start: 4006260
End: 4006715
Strand: Reverse
Name: 182680426
Synonym: Bind_3526
Alternate gene names: NA
Gene position: 4006715-4006260 (Counterclockwise)
Preceding gene: 182680427
Following gene: 182680422
Centisome position: 96.08
GC content: 58.55
Gene sequence:
>456_bases TTGACTGGGTTTCTTCTCGACACCAACGTCATTTCGATGCTCTCACCCTCGCGGGCCGAGGCCTCCCCAGTGTTTCTCGA CTGGCTGGAACGCATGGACAACGAAGGCAGGCTGTTCCTGCCGGTTGTCACGATCCACGAGATCGAAAAGGGGATTACGC TGCTCGAGCACAAGGGAGCGATTGCAAAGGCGGCGGGCTTGAAGGTCTGGCTCGCCGGTCTGGTTTCCACTTATGACGAC AAGATCATTGGCCTCGACGCCTCTGCGGCCGCGATTGCCGGACAGTTGGAGGCCAAGGCGATCTCTGCGGGACATGACCC GGGAATGGCAGACGCTGTCATCGCAGGCATTGCGAAAGCGCATGATCTCCACATTGTCACCTGCAACATGAAGCATTTCT TGCCATTCGGCATCGCGGTGTCGTTACCAGATGAGGCGGCCGGCCGCACAGGATAA
Upstream 100 bases:
>100_bases AGGCGATCGAGCGGAAACGCTCCGGCCTTGTCGCCTATCTCAGGACCTTTCCTGGTGGAGAGTTCGAACGTAACCGTGCA CCCTCGCGGGATGTCGAGCT
Downstream 100 bases:
>100_bases TGGCGGACGTTTTCAGGGGAGACGGATCACCCTGCGGCTTTCAGTGATTCTTGTTTGACTCCTTCCATTCGGTCTTGGCG CACTCACGAAGCCTTCGTCC
Product: PilT domain-containing protein
Products: NA
Alternate protein names: PilT Protein-Like; PilT Protein-Like Protein; PilT Protein Domain Protein; Plasmid Stability Protein; PilT Protein N-Terminal; Plasmid-Stability Like Protein; PilT Protein Domain-Containing Protein; PilT Protein N-Terminal Domain Protein; Xin-Antitoxin System Putative Toxin
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDD KIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG
Sequences:
>Translated_151_residues MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDD KIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG >Mature_150_residues TGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGAIAKAAGLKVWLAGLVSTYDDK IIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKAHDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG
Specific function: Unknown
COG id: COG1487
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15884; Mature: 15752
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGA CCCEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEECCCC IAKAAGLKVWLAGLVSTYDDKIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKA HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCC HDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG CCEEEEEECCHHCCCCCEEEECCCCCCCCCC >Mature Secondary Structure TGFLLDTNVISMLSPSRAEASPVFLDWLERMDNEGRLFLPVVTIHEIEKGITLLEHKGA CCEEECCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHCCEEEECCCC IAKAAGLKVWLAGLVSTYDDKIIGLDASAAAIAGQLEAKAISAGHDPGMADAVIAGIAKA HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHCC HDLHIVTCNMKHFLPFGIAVSLPDEAAGRTG CCEEEEEECCHHCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA