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The map label for this gene is yrbE [C]

Identifier: 182680400

GI number: 182680400

Start: 3977144

End: 3978274

Strand: Reverse

Name: yrbE [C]

Synonym: Bind_3500

Alternate gene names: 182680400

Gene position: 3978274-3977144 (Counterclockwise)

Preceding gene: 182680401

Following gene: 182680399

Centisome position: 95.4

GC content: 55.08

Gene sequence:

>1131_bases
ATGGCGTCCGCTGTTTCCTTGCAAAGTGCCCTGCGGGGCGAGACGCTGAATGTCATCGCGACAGGTTCATGGATAGGTGC
CCATGCCGCGGCGCTCGAACCTTTGATCGAAGGGGTCAGGCGCGATGGGCGAGGACGGACGCTCTCTGTCGACATGCGTG
GCGTGGACGAGATCGATACATTCGGAGCCTGTCTTCTTGAACGTTTGATTCAGAGCTGGAAAGCGGAAGGCAAGGAGACC
ACGATCACTGGCCTTTCTGATCGATTTGGCGATCTCGTCGCCGAAGTGGATCATGTCAGCCGTTCGATGAGTCAAGCGGC
TGCCAAAAGAACATCTCTCGATAGTCTGAGAGCATTCGGCCGCGCGGCCATGGACCTCTGGCTCGACACTAGAAATTTTC
TCGTCGTGCTGGGCAGGCTGGTAGCCGTCTTTTTGGTTGTGTTGCGCCACCCGAAAAAAATGCGGTTTACCTCTCTCGTG
GCCCAACTCGATCGCGTTGGTCTTCAGGCCGTACCGATTATCTTGCTGATCACTTTCTTGATCGGCGGCATTATCGCTCA
ACAGGGCCTTTTCAATTTCCGGAAATTCGGCGCCGATACTTATGTCGTCGATCTTCTTGCCTTTCTTGTGCTGCGTGAAT
TAGGCGTCCTCATCGTCGCCATCATGGTGGCGGGTCGTTCCGGCAGTTCCTATACCGCCGAGATCGGCTCCATGAAAATG
CGCGAGGAGATTGACGCTTTGCGGACAATGGGATTGGACCCCGTGGAGGTCCTTCTCTTGCCACGGGTTCTCGCGCTCGT
TCTGGCCTTGCCGATGCTGACGTTTCTCGGCTTCATGGCGGCTCTTTATGGCGGGGGAGTCGTCTCCTGGATCTATGGCG
GCATGAGCCCGCCAATTTTTATAGAACGTATACGGGATGCGGCTTCGCTGACTCAATTTGAGGTCGGTCTGATCAAGGCG
CCGTTCATGGCTCTTGTGATCGGTGTTATTGCTTGTACCGAAGGCCTTGCCGTCCAAGGCAGTGCTGAATCCTTGGGTCT
GCGGACGACATCATCCGTGGTCAAATCGATTTTTCTCATTATCGTGCTTGATGGTATCCTCGATCTGTTCTTCGCCGCGA
CTGGAATGTAA

Upstream 100 bases:

>100_bases
AATTGAGGGCCATTCCATCAGACTTTCATGCGGTCTTGATACAGAGGGCCAGGCTCAATAATTCTCGAGTTCGATGATTT
TTAAGGCATCGGAGAATCCT

Downstream 100 bases:

>100_bases
GTGATGGACTCTTCGAAGTCTCAGACAATCATCAATGTGCGCGACCTTGTCGTCGGCTTTGAGGACCAGACTGTCCTTGA
TCATCTTTCACTCGATGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MASAVSLQSALRGETLNVIATGSWIGAHAAALEPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKET
TITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAFGRAAMDLWLDTRNFLVVLGRLVAVFLVVLRHPKKMRFTSLV
AQLDRVGLQAVPIILLITFLIGGIIAQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKM
REEIDALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLTQFEVGLIKA
PFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFFAATGM

Sequences:

>Translated_376_residues
MASAVSLQSALRGETLNVIATGSWIGAHAAALEPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKET
TITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAFGRAAMDLWLDTRNFLVVLGRLVAVFLVVLRHPKKMRFTSLV
AQLDRVGLQAVPIILLITFLIGGIIAQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKM
REEIDALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLTQFEVGLIKA
PFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFFAATGM
>Mature_375_residues
ASAVSLQSALRGETLNVIATGSWIGAHAAALEPLIEGVRRDGRGRTLSVDMRGVDEIDTFGACLLERLIQSWKAEGKETT
ITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAFGRAAMDLWLDTRNFLVVLGRLVAVFLVVLRHPKKMRFTSLVA
QLDRVGLQAVPIILLITFLIGGIIAQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKMR
EEIDALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIFIERIRDAASLTQFEVGLIKAP
FMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLIIVLDGILDLFFAATGM

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=264, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40461; Mature: 40330

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50801 STAS ; PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAVSLQSALRGETLNVIATGSWIGAHAAALEPLIEGVRRDGRGRTLSVDMRGVDEIDT
CCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
FGACLLERLIQSWKAEGKETTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAFG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAMDLWLDTRNFLVVLGRLVAVFLVVLRHPKKMRFTSLVAQLDRVGLQAVPIILLITFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
IGGIIAQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
REEIDALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH
IERIRDAASLTQFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHH
IVLDGILDLFFAATGM
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASAVSLQSALRGETLNVIATGSWIGAHAAALEPLIEGVRRDGRGRTLSVDMRGVDEIDT
CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
FGACLLERLIQSWKAEGKETTITGLSDRFGDLVAEVDHVSRSMSQAAAKRTSLDSLRAFG
HHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAMDLWLDTRNFLVVLGRLVAVFLVVLRHPKKMRFTSLVAQLDRVGLQAVPIILLITFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
IGGIIAQQGLFNFRKFGADTYVVDLLAFLVLRELGVLIVAIMVAGRSGSSYTAEIGSMKM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
REEIDALRTMGLDPVEVLLLPRVLALVLALPMLTFLGFMAALYGGGVVSWIYGGMSPPIF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHH
IERIRDAASLTQFEVGLIKAPFMALVIGVIACTEGLAVQGSAESLGLRTTSSVVKSIFLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHCCHHHHHHHHHHHHH
IVLDGILDLFFAATGM
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]