| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is panB [H]
Identifier: 182680199
GI number: 182680199
Start: 3749399
End: 3750220
Strand: Reverse
Name: panB [H]
Synonym: Bind_3297
Alternate gene names: 182680199
Gene position: 3750220-3749399 (Counterclockwise)
Preceding gene: 182680203
Following gene: 182680197
Centisome position: 89.93
GC content: 61.31
Gene sequence:
>822_bases ATGAGCATGGCGGATAAGGCGGCGCGTTTTGCTGAGATGAAGAGGCGGGGCGAGCCGATCGCCATGCTGACCGCTTATGA TGCGCCTATGGCGCGAGCGGAAGCTGCGGCCCGCGTCGATATTCTGCTCGTGGGTGATAGTGTCGGCACAAACATGCTCG GCTATGCCAGCGAGCAGGAGGTGACGCTTGCGGATATGGCGCATCATACACGGGCGGTCCGGCGCGGTGCGCCAGACGCT TTCGTGATTTCCGATCTCCCTGTCGCGACTTATGAAACCCCCACCGAGGCCGTGGCCAATGCCAGGGTTCTGGCCGAAGC TGGCGCGGATATGGTGAAATTCGAAGGCTGCCGCCCCGCCATTGTGGAAGCGCTCGTCGGCGCGGGTTTTGCGGTTTGCG GCCATCTGGGTCTTGAGCCGCAGCACCATGCCGAAAAACGCCTCAAGGGCAAACAAGCCGGTGAGGCGCATCAATTGGTC GAGGCCGCCTTGACCATGGAGAAAGCTGGCATTGCGATGCTGGTTCTGGAACTGATCCCCGAGGAAGTGGCGGAGATCGT CACGCAAAGGCTGAAAGTGCCGACCATTGGTATTGGCGCCGGCCGGGCGACCGATGGCCAGGTTCTGGTGATCTGCGACG TGCTGGGCTATACTAAAGCCGCGTTTCGCCACAATAAGCGCTATGCGGAGGTCGGCGAAACGATGGAAGCCGCCGCGCGC GCCTATGTCGGGGATGTGCATAGCAAGGCGTTTCCGGCCGCTGCCAATGCCTTTCCCATGAACAAGGAGCAATTGCCGGA ATTCCTTGCCTCGCTGGCCTGA
Upstream 100 bases:
>100_bases TTTTGCCCCGGTTCCGATCTATATTATGGAGTGGATTCCGGCGGTCGGCGGGTCGCGGCTCGCACCGGCCGGAAAAGGAT GACGAGCAGGTGTGAAGAGC
Downstream 100 bases:
>100_bases CGCTGACCGCTCAGGCCGAGAGCTTGGCCTTGACCGCGCCGGATGCCTTGCCGAAATCCATGCGGCCGGCATATTTGGCT TTGAGGACGGCGACCACCTT
Product: 3-methyl-2-oxobutanoate hydroxymethyltransferase
Products: NA
Alternate protein names: Ketopantoate hydroxymethyltransferase; KPHMT [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSMADKAARFAEMKRRGEPIAMLTAYDAPMARAEAAARVDILLVGDSVGTNMLGYASEQEVTLADMAHHTRAVRRGAPDA FVISDLPVATYETPTEAVANARVLAEAGADMVKFEGCRPAIVEALVGAGFAVCGHLGLEPQHHAEKRLKGKQAGEAHQLV EAALTMEKAGIAMLVLELIPEEVAEIVTQRLKVPTIGIGAGRATDGQVLVICDVLGYTKAAFRHNKRYAEVGETMEAAAR AYVGDVHSKAFPAAANAFPMNKEQLPEFLASLA
Sequences:
>Translated_273_residues MSMADKAARFAEMKRRGEPIAMLTAYDAPMARAEAAARVDILLVGDSVGTNMLGYASEQEVTLADMAHHTRAVRRGAPDA FVISDLPVATYETPTEAVANARVLAEAGADMVKFEGCRPAIVEALVGAGFAVCGHLGLEPQHHAEKRLKGKQAGEAHQLV EAALTMEKAGIAMLVLELIPEEVAEIVTQRLKVPTIGIGAGRATDGQVLVICDVLGYTKAAFRHNKRYAEVGETMEAAAR AYVGDVHSKAFPAAANAFPMNKEQLPEFLASLA >Mature_272_residues SMADKAARFAEMKRRGEPIAMLTAYDAPMARAEAAARVDILLVGDSVGTNMLGYASEQEVTLADMAHHTRAVRRGAPDAF VISDLPVATYETPTEAVANARVLAEAGADMVKFEGCRPAIVEALVGAGFAVCGHLGLEPQHHAEKRLKGKQAGEAHQLVE AALTMEKAGIAMLVLELIPEEVAEIVTQRLKVPTIGIGAGRATDGQVLVICDVLGYTKAAFRHNKRYAEVGETMEAAARA YVGDVHSKAFPAAANAFPMNKEQLPEFLASLA
Specific function: Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate [H]
COG id: COG0413
COG function: function code H; Ketopantoate hydroxymethyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the panB family [H]
Homologues:
Organism=Escherichia coli, GI1786326, Length=257, Percent_Identity=40.4669260700389, Blast_Score=177, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6319653, Length=272, Percent_Identity=31.6176470588235, Blast_Score=135, Evalue=8e-33,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003700 - InterPro: IPR015813 [H]
Pfam domain/function: PF02548 Pantoate_transf [H]
EC number: =2.1.2.11 [H]
Molecular weight: Translated: 28993; Mature: 28862
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMADKAARFAEMKRRGEPIAMLTAYDAPMARAEAAARVDILLVGDSVGTNMLGYASEQE CCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHEEEEEEECCCCCCCHHCCCCCCC VTLADMAHHTRAVRRGAPDAFVISDLPVATYETPTEAVANARVLAEAGADMVKFEGCRPA HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHH IVEALVGAGFAVCGHLGLEPQHHAEKRLKGKQAGEAHQLVEAALTMEKAGIAMLVLELIP HHHHHHHCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEVAEIVTQRLKVPTIGIGAGRATDGQVLVICDVLGYTKAAFRHNKRYAEVGETMEAAAR HHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHH AYVGDVHSKAFPAAANAFPMNKEQLPEFLASLA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SMADKAARFAEMKRRGEPIAMLTAYDAPMARAEAAARVDILLVGDSVGTNMLGYASEQE CHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHEEEEEEECCCCCCCHHCCCCCCC VTLADMAHHTRAVRRGAPDAFVISDLPVATYETPTEAVANARVLAEAGADMVKFEGCRPA HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHH IVEALVGAGFAVCGHLGLEPQHHAEKRLKGKQAGEAHQLVEAALTMEKAGIAMLVLELIP HHHHHHHCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEVAEIVTQRLKVPTIGIGAGRATDGQVLVICDVLGYTKAAFRHNKRYAEVGETMEAAAR HHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHH AYVGDVHSKAFPAAANAFPMNKEQLPEFLASLA HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA