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The map label for this gene is bepC [H]

Identifier: 182680134

GI number: 182680134

Start: 3674493

End: 3675944

Strand: Reverse

Name: bepC [H]

Synonym: Bind_3231

Alternate gene names: 182680134

Gene position: 3675944-3674493 (Counterclockwise)

Preceding gene: 182680135

Following gene: 182680132

Centisome position: 88.15

GC content: 57.37

Gene sequence:

>1452_bases
ATGCGTGCTTTGCATTCCTTGAAAGTGAAGACCTGGGACAAGAGGGAGGCCTGTCATCAATCGGCTTTCCATCGCTCTGT
CTTTCTGGGCGGCGTGCTGCTTATTCTGAGTTCGGGCATCTCGGGCGTGAAGAGCGAGACGATGTCGAGCGCTTTGGCCA
ATGCCTATGCCACCAATCCGGACGTGAATCAGCAGCGTGCCTCCTTGCGCGCGACCGACGAATCGTTGCCGCAGGCCTTG
GCGCTCGGGCGGCCGTCGATCATGGGAAGCGGACAATATGGTTTCAACCATCGCTTTTCGAGTCTACCCGGTCGAAACGG
CGCATTTGGTGGTCTCTTCAATAACGATATCGGCTATGTGAATGGTTCACTGAACCAGAATATTTTCAACGGCAATCAAA
CCGTGAATAGTGTTCGCCAGGCGGAATCGACAATTCTCGGCGGGCGCGAAACATTGCGCAATACCGAGCAGAGTGTTCTG
CAAAACGGCGCCACCGCTTATATGGATGTCCTGCGCGATACCGCCGTTCTCGAATTACGCCGCAACAATATCATTGTTCT
CATGGAACAATTGCGCCAGACGCGCTACCGTTTCAACGTCGGGGACGTCACGCGGACCGATGTGGCGCAAGCGGAATCGA
GCTTGGAAACCGCGCGTTCGGATTATTTTACCGCCCAGGCCAATCTGCAGACGAGCATCGCCAATTTCCGGCAGGTTATC
GGCCGCCAGCCCAAGCAGCTTGAGGCGGCCGCGACGGTCGAGAAATTGCTGCCGTCCAATCTCGACACGGCAATCAGTGT
TGCGCTCCTCGAGCATCCCTCGATCCAGGAGGCTCTCCACAATGTGGATGCGGCGGCCGCGCAAGTGAAGATCATTGAAG
GCCAGCTTTATCCAAAGGTCGATCTCAACGCCACGACGCAAAGAACCTTCAATGTTAATGGCATGACCGGCTATCAGCAG
TACAATGGAACGATCCAGGGGCAGATGTCCGTGCCGATTTATGAAAATGGCGGCACGACTTATTCCCGTATTCGCCAGGC
CAAGGAGCAAGTGACTCAGGCGCGACTTCAGGCGGATCTCCAGAAAACCAATGTGCGCGCGGCTCTCGTCTCGGCCTGGG
GCCAGCTCACGACGGCGCGGGCGACCATTGAATCCTCGATGGCCGCGGTCAAGGCTTCGGAAATTGCGCTTGAAGGCGTG
CGTGTGGAGGCCCAGGTCGGTCAACGCACAACGCTCGACGTGTTGAATGCCCAGCAAACTCTTTTGGGCAATCGGGTTGC
GCTCGTCACGGCGCAGCGCGATCGCGTCGTTGCCTCCTATGTGGTCATGGCGGCCATGGGGAAATTGACGGCCACCAATC
TGCACCTCGCTGTGGTGCATTACGATCCGAGCGTGCATTTCGATCAGGTCAAGGACAAGTGGGTGGGCGTGCGCACACCT
GACGGGCGGTGA

Upstream 100 bases:

>100_bases
GTGACGCGCGTCATTGCTGAATTGGGGCGAGGGCGCGCAGTCAGGCCTCGAGCCGCCGGCTTGTGGATCTCCGCCTCTAA
CCTGGGTGATAATCGTCTGG

Downstream 100 bases:

>100_bases
GGCCAAATTCAGGATCCCTGCTTGGCGATCTTTCCCGGCAGGGGAAATAATCCCAAAAACCGTTCGGCCAATGCCCTGTC
TCCCTCGACCTTGAGCGTCC

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MRALHSLKVKTWDKREACHQSAFHRSVFLGGVLLILSSGISGVKSETMSSALANAYATNPDVNQQRASLRATDESLPQAL
ALGRPSIMGSGQYGFNHRFSSLPGRNGAFGGLFNNDIGYVNGSLNQNIFNGNQTVNSVRQAESTILGGRETLRNTEQSVL
QNGATAYMDVLRDTAVLELRRNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIANFRQVI
GRQPKQLEAAATVEKLLPSNLDTAISVALLEHPSIQEALHNVDAAAAQVKIIEGQLYPKVDLNATTQRTFNVNGMTGYQQ
YNGTIQGQMSVPIYENGGTTYSRIRQAKEQVTQARLQADLQKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGV
RVEAQVGQRTTLDVLNAQQTLLGNRVALVTAQRDRVVASYVVMAAMGKLTATNLHLAVVHYDPSVHFDQVKDKWVGVRTP
DGR

Sequences:

>Translated_483_residues
MRALHSLKVKTWDKREACHQSAFHRSVFLGGVLLILSSGISGVKSETMSSALANAYATNPDVNQQRASLRATDESLPQAL
ALGRPSIMGSGQYGFNHRFSSLPGRNGAFGGLFNNDIGYVNGSLNQNIFNGNQTVNSVRQAESTILGGRETLRNTEQSVL
QNGATAYMDVLRDTAVLELRRNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIANFRQVI
GRQPKQLEAAATVEKLLPSNLDTAISVALLEHPSIQEALHNVDAAAAQVKIIEGQLYPKVDLNATTQRTFNVNGMTGYQQ
YNGTIQGQMSVPIYENGGTTYSRIRQAKEQVTQARLQADLQKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGV
RVEAQVGQRTTLDVLNAQQTLLGNRVALVTAQRDRVVASYVVMAAMGKLTATNLHLAVVHYDPSVHFDQVKDKWVGVRTP
DGR
>Mature_483_residues
MRALHSLKVKTWDKREACHQSAFHRSVFLGGVLLILSSGISGVKSETMSSALANAYATNPDVNQQRASLRATDESLPQAL
ALGRPSIMGSGQYGFNHRFSSLPGRNGAFGGLFNNDIGYVNGSLNQNIFNGNQTVNSVRQAESTILGGRETLRNTEQSVL
QNGATAYMDVLRDTAVLELRRNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIANFRQVI
GRQPKQLEAAATVEKLLPSNLDTAISVALLEHPSIQEALHNVDAAAAQVKIIEGQLYPKVDLNATTQRTFNVNGMTGYQQ
YNGTIQGQMSVPIYENGGTTYSRIRQAKEQVTQARLQADLQKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGV
RVEAQVGQRTTLDVLNAQQTLLGNRVALVTAQRDRVVASYVVMAAMGKLTATNLHLAVVHYDPSVHFDQVKDKWVGVRTP
DGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=369, Percent_Identity=27.3712737127371, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52689; Mature: 52689

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALHSLKVKTWDKREACHQSAFHRSVFLGGVLLILSSGISGVKSETMSSALANAYATNP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
DVNQQRASLRATDESLPQALALGRPSIMGSGQYGFNHRFSSLPGRNGAFGGLFNNDIGYV
CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEE
NGSLNQNIFNGNQTVNSVRQAESTILGGRETLRNTEQSVLQNGATAYMDVLRDTAVLELR
CCCCCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEC
RNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIANFRQVI
CCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH
GRQPKQLEAAATVEKLLPSNLDTAISVALLEHPSIQEALHNVDAAAAQVKIIEGQLYPKV
CCCCHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCC
DLNATTQRTFNVNGMTGYQQYNGTIQGQMSVPIYENGGTTYSRIRQAKEQVTQARLQADL
CCCCCCCEEEECCCCCCHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGVRVEAQVGQRTTLDVLNAQQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH
LLGNRVALVTAQRDRVVASYVVMAAMGKLTATNLHLAVVHYDPSVHFDQVKDKWVGVRTP
HHCCEEEEEEECCHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCHHHHHHCEEECCCC
DGR
CCC
>Mature Secondary Structure
MRALHSLKVKTWDKREACHQSAFHRSVFLGGVLLILSSGISGVKSETMSSALANAYATNP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
DVNQQRASLRATDESLPQALALGRPSIMGSGQYGFNHRFSSLPGRNGAFGGLFNNDIGYV
CCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEE
NGSLNQNIFNGNQTVNSVRQAESTILGGRETLRNTEQSVLQNGATAYMDVLRDTAVLELR
CCCCCCCEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEC
RNNIIVLMEQLRQTRYRFNVGDVTRTDVAQAESSLETARSDYFTAQANLQTSIANFRQVI
CCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH
GRQPKQLEAAATVEKLLPSNLDTAISVALLEHPSIQEALHNVDAAAAQVKIIEGQLYPKV
CCCCHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCC
DLNATTQRTFNVNGMTGYQQYNGTIQGQMSVPIYENGGTTYSRIRQAKEQVTQARLQADL
CCCCCCCEEEECCCCCCHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QKTNVRAALVSAWGQLTTARATIESSMAAVKASEIALEGVRVEAQVGQRTTLDVLNAQQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH
LLGNRVALVTAQRDRVVASYVVMAAMGKLTATNLHLAVVHYDPSVHFDQVKDKWVGVRTP
HHCCEEEEEEECCHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCHHHHHHCEEECCCC
DGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]