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The map label for this gene is ybaA [H]

Identifier: 182680132

GI number: 182680132

Start: 3672940

End: 3673662

Strand: Reverse

Name: ybaA [H]

Synonym: Bind_3229

Alternate gene names: 182680132

Gene position: 3673662-3672940 (Counterclockwise)

Preceding gene: 182680134

Following gene: 182680131

Centisome position: 88.09

GC content: 55.88

Gene sequence:

>723_bases
ATGATGAATTATGTGGAAGGTTTTGTGGCCGCTGTGCCCGCCGCCAATAAGGAAGCCTATCGCCGGCATATCCAGGAAGC
ATTTCCCCTATTCAAGCAATTTGGGGCCACCCGGATGGTCGAATGCTGGGGAGATGATGTTCCACTTGGCGAGATCACTG
ACTTCAAGGGGGCGGTGAAGGCACAGGATGATGAAGTCGTTGTGTTCAGCTGGCTGGAATATCCCTCAAAGGCGGCCCGC
GACGCGGCGCATGAAAAGATCATGAGCGATCCGCATATGAAGCAAATCGGCGCGGCCATGCCCTTTGATGGCAAGCGGAT
GATTTTTGGCGGTTTCGCGCCGATCCTGGACGAAGCCTCAGGCGGCGCCATGGGCTATACAGACGGCTTTGTGCTCGCTG
TGCCAAGTGTGAACAAGGAGGCTTATCGCGCAGTGGCTTCCAAGATGGCGGCCATGCTCAAGGACTATGGCGCTATTCGC
GTCGTGGAGGCATGGGCCGATGACGTGCCCGAGGGAAAAATCACTGACTTTAAACATGCGGTGAAGGCGAAAGAGGATGA
GGTGGTCGTCTATTCCTGGGTCGAATGGCCATCGAAGGAAATCCGGGACGAAGGATGGCAGAAGTTCATGGCGGATGCGC
GCATGCAACCCGACAAGGAAACCATGCCGTTTGATGGGCAGCGCATGATTCACGGCGGTTTTTCGCCACTGCATGATGCA
TGA

Upstream 100 bases:

>100_bases
ACTAAGCAACTTTTGTCAAAATGGTTCATTAACCCGGCATGGCCGGCGGCCGCCACGGCTGTAAGCGCCATCAATCGCAT
AAAATCAAGGGAGAAATGCC

Downstream 100 bases:

>100_bases
TGCATGATGCATGATAGTGCCAAGGGGCGCGGATAATCCATCAGAGAGCGCATCATTTTGGGAGGTTTTTCGCCCGAAGG
GAGAAGATGATGTCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MMNYVEGFVAAVPAANKEAYRRHIQEAFPLFKQFGATRMVECWGDDVPLGEITDFKGAVKAQDDEVVVFSWLEYPSKAAR
DAAHEKIMSDPHMKQIGAAMPFDGKRMIFGGFAPILDEASGGAMGYTDGFVLAVPSVNKEAYRAVASKMAAMLKDYGAIR
VVEAWADDVPEGKITDFKHAVKAKEDEVVVYSWVEWPSKEIRDEGWQKFMADARMQPDKETMPFDGQRMIHGGFSPLHDA

Sequences:

>Translated_240_residues
MMNYVEGFVAAVPAANKEAYRRHIQEAFPLFKQFGATRMVECWGDDVPLGEITDFKGAVKAQDDEVVVFSWLEYPSKAAR
DAAHEKIMSDPHMKQIGAAMPFDGKRMIFGGFAPILDEASGGAMGYTDGFVLAVPSVNKEAYRAVASKMAAMLKDYGAIR
VVEAWADDVPEGKITDFKHAVKAKEDEVVVYSWVEWPSKEIRDEGWQKFMADARMQPDKETMPFDGQRMIHGGFSPLHDA
>Mature_240_residues
MMNYVEGFVAAVPAANKEAYRRHIQEAFPLFKQFGATRMVECWGDDVPLGEITDFKGAVKAQDDEVVVFSWLEYPSKAAR
DAAHEKIMSDPHMKQIGAAMPFDGKRMIFGGFAPILDEASGGAMGYTDGFVLAVPSVNKEAYRAVASKMAAMLKDYGAIR
VVEAWADDVPEGKITDFKHAVKAKEDEVVVYSWVEWPSKEIRDEGWQKFMADARMQPDKETMPFDGQRMIHGGFSPLHDA

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=117, Percent_Identity=64.957264957265, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 26751; Mature: 26751

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNYVEGFVAAVPAANKEAYRRHIQEAFPLFKQFGATRMVECWGDDVPLGEITDFKGAVK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCCC
AQDDEVVVFSWLEYPSKAARDAAHEKIMSDPHMKQIGAAMPFDGKRMIFGGFAPILDEAS
CCCCCEEEEECHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCHHHHHCCC
GGAMGYTDGFVLAVPSVNKEAYRAVASKMAAMLKDYGAIRVVEAWADDVPEGKITDFKHA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHHHHH
VKAKEDEVVVYSWVEWPSKEIRDEGWQKFMADARMQPDKETMPFDGQRMIHGGFSPLHDA
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MMNYVEGFVAAVPAANKEAYRRHIQEAFPLFKQFGATRMVECWGDDVPLGEITDFKGAVK
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCCC
AQDDEVVVFSWLEYPSKAARDAAHEKIMSDPHMKQIGAAMPFDGKRMIFGGFAPILDEAS
CCCCCEEEEECHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEECCCHHHHHCCC
GGAMGYTDGFVLAVPSVNKEAYRAVASKMAAMLKDYGAIRVVEAWADDVPEGKITDFKHA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHHHHH
VKAKEDEVVVYSWVEWPSKEIRDEGWQKFMADARMQPDKETMPFDGQRMIHGGFSPLHDA
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]