Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182680130

Identifier: 182680130

GI number: 182680130

Start: 3671878

End: 3672192

Strand: Reverse

Name: 182680130

Synonym: Bind_3227

Alternate gene names: NA

Gene position: 3672192-3671878 (Counterclockwise)

Preceding gene: 182680131

Following gene: 182680127

Centisome position: 88.06

GC content: 56.83

Gene sequence:

>315_bases
ATGAGTGAAGGCAATCCGGGCGAGGCCTCTCGCGGCAATGGAGCGTCCCGTCATGGCGGTTCCCCGCATGCCGATATTGC
GGAAACCGGTGTCGCCGCCGAGGAATTGCGGCAATTCGTCGAGCGCGTGGAACGCCTCGAAGAGGAAAAAAAGGCGCTTT
CCGATGATATCCGTGATGTTTATGCGGAAATGAAAGGCCGTGGCTTCGACGTCAAGGTCGTGCGCCAGATCGTTCGCATG
CGCAAGCAGGATCACGCCGAGCGGATGGAAATGGAGGCCATTCTCGACCTTTATATGAGCGCTTTGAATATGTGA

Upstream 100 bases:

>100_bases
TGTTGAGACCCATTCCTCGCTTTTTGGAATGTCTGTCAGGTCTTGCGGGCGCGGGGTTCATCCGCTTGGGCAAGCACCGC
CTTTGCTGAGGAGAACCGTG

Downstream 100 bases:

>100_bases
TCGACCGCCGGGTCAGGGGCCAACTCTGACTCGAGGGTCAGGTCACGATTCCCGCATAAACCATGCGATCAATATTGGCG
CCGGTGAGGATCAGGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSEGNPGEASRGNGASRHGGSPHADIAETGVAAEELRQFVERVERLEEEKKALSDDIRDVYAEMKGRGFDVKVVRQIVRM
RKQDHAERMEMEAILDLYMSALNM

Sequences:

>Translated_104_residues
MSEGNPGEASRGNGASRHGGSPHADIAETGVAAEELRQFVERVERLEEEKKALSDDIRDVYAEMKGRGFDVKVVRQIVRM
RKQDHAERMEMEAILDLYMSALNM
>Mature_103_residues
SEGNPGEASRGNGASRHGGSPHADIAETGVAAEELRQFVERVERLEEEKKALSDDIRDVYAEMKGRGFDVKVVRQIVRMR
KQDHAERMEMEAILDLYMSALNM

Specific function: Unknown

COG id: COG3750

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0335 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018753 [H]

Pfam domain/function: PF10073 DUF2312 [H]

EC number: NA

Molecular weight: Translated: 11705; Mature: 11574

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGNPGEASRGNGASRHGGSPHADIAETGVAAEELRQFVERVERLEEEKKALSDDIRDV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEMKGRGFDVKVVRQIVRMRKQDHAERMEMEAILDLYMSALNM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEGNPGEASRGNGASRHGGSPHADIAETGVAAEELRQFVERVERLEEEKKALSDDIRDV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAEMKGRGFDVKVVRQIVRMRKQDHAERMEMEAILDLYMSALNM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA