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The map label for this gene is 182680108

Identifier: 182680108

GI number: 182680108

Start: 3646848

End: 3647279

Strand: Reverse

Name: 182680108

Synonym: Bind_3205

Alternate gene names: NA

Gene position: 3647279-3646848 (Counterclockwise)

Preceding gene: 182680113

Following gene: 182680107

Centisome position: 87.46

GC content: 56.94

Gene sequence:

>432_bases
ATGGTTTCCGCGGGTTTTATCTTTCGTCCAATTTTACAGGCAGCGCGGCGCGCCGATGTCCGTGTTCTTGCGCTTTTGTG
CGCGCTAGCGGGGTCGGCTCTTGGGGCGAAGGCCGAGGATGCCGAAAAGGGAAAACAACAGTTTTTGACCAGTTGCGGCG
TCTGCCATACGGCCGAACCCGGAGCCGGCAATCGCCAGGGGCCCAATCTTGCTGGCGTCTACGGCCGCAAGGTCGGGAGC
ATCGCCGATTTTAACTATTCGCCGGCGTTGAAATCCGGCACCTGGGTATGGAATGAGACGACACTCGATCCCTGGTTGAC
CAATTCGCAGGAAGCGCATCCGGGAACCTTCATGAATTACCGGCAGGCCAATGCGGAGAAGCGGCGTCTGGTGATCGATT
ATCTGAGTTCATTGTCCAAGGAGAGCAAATAA

Upstream 100 bases:

>100_bases
CCGTACAAGGCCATGATATAGGGCGTCCATGTGAGACGCCAAGGCCAGCCGAAAGCACGATTTCGATCTCAGGCGTCCTG
AAAAGGGAGAAGGTTCGCCG

Downstream 100 bases:

>100_bases
GCGTCATGACTAAAACGATTCATGTGATGCTGCGTGTCCTGGAGGAGGAACGTTCCGTGGCCTTCTACAAGACGGCTCTC
GGATTGGCGGTTGCCGATCG

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVSAGFIFRPILQAARRADVRVLALLCALAGSALGAKAEDAEKGKQQFLTSCGVCHTAEPGAGNRQGPNLAGVYGRKVGS
IADFNYSPALKSGTWVWNETTLDPWLTNSQEAHPGTFMNYRQANAEKRRLVIDYLSSLSKESK

Sequences:

>Translated_143_residues
MVSAGFIFRPILQAARRADVRVLALLCALAGSALGAKAEDAEKGKQQFLTSCGVCHTAEPGAGNRQGPNLAGVYGRKVGS
IADFNYSPALKSGTWVWNETTLDPWLTNSQEAHPGTFMNYRQANAEKRRLVIDYLSSLSKESK
>Mature_143_residues
MVSAGFIFRPILQAARRADVRVLALLCALAGSALGAKAEDAEKGKQQFLTSCGVCHTAEPGAGNRQGPNLAGVYGRKVGS
IADFNYSPALKSGTWVWNETTLDPWLTNSQEAHPGTFMNYRQANAEKRRLVIDYLSSLSKESK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=103, Percent_Identity=38.8349514563107, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17539604, Length=106, Percent_Identity=36.7924528301887, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320796, Length=113, Percent_Identity=35.3982300884956, Blast_Score=76, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322508, Length=100, Percent_Identity=38, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17137228, Length=110, Percent_Identity=41.8181818181818, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137204, Length=100, Percent_Identity=42, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15460; Mature: 15460

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAGFIFRPILQAARRADVRVLALLCALAGSALGAKAEDAEKGKQQFLTSCGVCHTAEP
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
GAGNRQGPNLAGVYGRKVGSIADFNYSPALKSGTWVWNETTLDPWLTNSQEAHPGTFMNY
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
RQANAEKRRLVIDYLSSLSKESK
HHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSAGFIFRPILQAARRADVRVLALLCALAGSALGAKAEDAEKGKQQFLTSCGVCHTAEP
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
GAGNRQGPNLAGVYGRKVGSIADFNYSPALKSGTWVWNETTLDPWLTNSQEAHPGTFMNY
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
RQANAEKRRLVIDYLSSLSKESK
HHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]