Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is ycjY [C]

Identifier: 182679887

GI number: 182679887

Start: 3387118

End: 3388020

Strand: Reverse

Name: ycjY [C]

Synonym: Bind_2979

Alternate gene names: 182679887

Gene position: 3388020-3387118 (Counterclockwise)

Preceding gene: 182679889

Following gene: 182679885

Centisome position: 81.24

GC content: 64.23

Gene sequence:

>903_bases
ATGGCTTTCACAAGCCGGAATGTTCATTATACGGTTGGCAGCGATGACATCGTCGGCACGTTTTATCTGCCGGAGGACAA
CGGTCCGCGGCGTGTTGGTTGCGTCGTGCTCGGACACGGCTGGGGCATGGTGGCCGGCGGCGACCTCGAGGACTATGCAA
GAGCGATCGTCGAATGCGGCCTGGCAGCGCTGACTTTCGATTACCGCAACCTTGGCAAGAGCGGCGGCATGCCGCGCCAG
CACATCGATCCCTGGAAGCAGGTCGAGGATTTTCGTGCCGGCATCAGCTTCGTGCGTAGCCAGCGGGAGGTCGACGGCGA
ACGCATCGGCATCTGGGGATCGAGCTATGGCGGCGGCCATGCCCTGACGGTGACGGCGATCGATCCCCGTGTGCGCTGCG
CAGTCAGCCAAGTTCCCACGATCAACAGCTGGCGGGCCGCACGCGCACGCCTGGATGCGGCGGCCTGGAACGCGCAACAA
GCGGCCTTCATCGCCGACCGGGAGGCCGTATTCGCCGGGGCCGAGCCGGCAACGATCCAATCGGTCAGCGCGGATCCAGC
CGCATCGGTCGCCTACCGGGGTGAGGAGTCCTACCGGTACATGTCGGGCGAGGGGCAGCGCTGCCCCGAGTGGCGCAACC
ACACCACGCTCGCCTCGATCGAACTAGCCCGCGGCTACGAACCGGGCAGTTACCTCCGTCGTATCACCGATGTGCCGCTT
CTGATGATCGTCGCCGATCGCGACACCATCACCCCGACCGACTTGCAGCGCGAAGCCTTCGCCTCGTTGGCGACGGAAAA
GGCGCTGCTCGAGGTCGAGGGTGGACACTATGCCGTCTACCAGGAGCATTTCGACAAGACGAGTTCAGCCGCAGCCGAAT
GGTTCGCGTCGCATCTGAAATAA

Upstream 100 bases:

>100_bases
ATACGATTAATAAGGCAGATATATCAATTTGATCGATTGTCATGGCGGTGACATCCTTTTTGACAAGCCGGCTGGAAAGC
CAGCCTGAAGGGATCACCGA

Downstream 100 bases:

>100_bases
ACGCACAATATCCGGGAGGAAATCCATGAATATTTCAACGACGTCCCAGCAGGGGCGGCGGAGGTCCCTCCATGCCGCAG
CCGCCGGCAACGCACTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQ
HIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQ
AAFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL
LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK

Sequences:

>Translated_300_residues
MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQ
HIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQ
AAFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL
LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK
>Mature_299_residues
AFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQH
IDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQA
AFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPLL
MIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=142, Percent_Identity=28.8732394366197, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32850; Mature: 32719

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECG
CCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC
LAALTFDYRNLGKSGGMPRQHIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGH
HHHEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
ALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQAAFIADREAVFAGAEPATIQ
EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCHHEEECCCCCEEE
SVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL
ECCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCE
LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK
EEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECG
CCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC
LAALTFDYRNLGKSGGMPRQHIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGH
HHHEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
ALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQAAFIADREAVFAGAEPATIQ
EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCHHEEECCCCCEEE
SVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL
ECCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCE
LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK
EEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916281 [H]