| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ycjY [C]
Identifier: 182679887
GI number: 182679887
Start: 3387118
End: 3388020
Strand: Reverse
Name: ycjY [C]
Synonym: Bind_2979
Alternate gene names: 182679887
Gene position: 3388020-3387118 (Counterclockwise)
Preceding gene: 182679889
Following gene: 182679885
Centisome position: 81.24
GC content: 64.23
Gene sequence:
>903_bases ATGGCTTTCACAAGCCGGAATGTTCATTATACGGTTGGCAGCGATGACATCGTCGGCACGTTTTATCTGCCGGAGGACAA CGGTCCGCGGCGTGTTGGTTGCGTCGTGCTCGGACACGGCTGGGGCATGGTGGCCGGCGGCGACCTCGAGGACTATGCAA GAGCGATCGTCGAATGCGGCCTGGCAGCGCTGACTTTCGATTACCGCAACCTTGGCAAGAGCGGCGGCATGCCGCGCCAG CACATCGATCCCTGGAAGCAGGTCGAGGATTTTCGTGCCGGCATCAGCTTCGTGCGTAGCCAGCGGGAGGTCGACGGCGA ACGCATCGGCATCTGGGGATCGAGCTATGGCGGCGGCCATGCCCTGACGGTGACGGCGATCGATCCCCGTGTGCGCTGCG CAGTCAGCCAAGTTCCCACGATCAACAGCTGGCGGGCCGCACGCGCACGCCTGGATGCGGCGGCCTGGAACGCGCAACAA GCGGCCTTCATCGCCGACCGGGAGGCCGTATTCGCCGGGGCCGAGCCGGCAACGATCCAATCGGTCAGCGCGGATCCAGC CGCATCGGTCGCCTACCGGGGTGAGGAGTCCTACCGGTACATGTCGGGCGAGGGGCAGCGCTGCCCCGAGTGGCGCAACC ACACCACGCTCGCCTCGATCGAACTAGCCCGCGGCTACGAACCGGGCAGTTACCTCCGTCGTATCACCGATGTGCCGCTT CTGATGATCGTCGCCGATCGCGACACCATCACCCCGACCGACTTGCAGCGCGAAGCCTTCGCCTCGTTGGCGACGGAAAA GGCGCTGCTCGAGGTCGAGGGTGGACACTATGCCGTCTACCAGGAGCATTTCGACAAGACGAGTTCAGCCGCAGCCGAAT GGTTCGCGTCGCATCTGAAATAA
Upstream 100 bases:
>100_bases ATACGATTAATAAGGCAGATATATCAATTTGATCGATTGTCATGGCGGTGACATCCTTTTTGACAAGCCGGCTGGAAAGC CAGCCTGAAGGGATCACCGA
Downstream 100 bases:
>100_bases ACGCACAATATCCGGGAGGAAATCCATGAATATTTCAACGACGTCCCAGCAGGGGCGGCGGAGGTCCCTCCATGCCGCAG CCGCCGGCAACGCACTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQ HIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQ AAFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK
Sequences:
>Translated_300_residues MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQ HIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQ AAFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK >Mature_299_residues AFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECGLAALTFDYRNLGKSGGMPRQH IDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGHALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQA AFIADREAVFAGAEPATIQSVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPLL MIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjY [H]
Homologues:
Organism=Escherichia coli, GI221142683, Length=142, Percent_Identity=28.8732394366197, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 32850; Mature: 32719
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECG CCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC LAALTFDYRNLGKSGGMPRQHIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGH HHHEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE ALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQAAFIADREAVFAGAEPATIQ EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCHHEEECCCCCEEE SVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL ECCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCE LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK EEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure AFTSRNVHYTVGSDDIVGTFYLPEDNGPRRVGCVVLGHGWGMVAGGDLEDYARAIVECG CCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHCC LAALTFDYRNLGKSGGMPRQHIDPWKQVEDFRAGISFVRSQREVDGERIGIWGSSYGGGH HHHEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE ALTVTAIDPRVRCAVSQVPTINSWRAARARLDAAAWNAQQAAFIADREAVFAGAEPATIQ EEEEEEECCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCHHEEEECCHHEEECCCCCEEE SVSADPAASVAYRGEESYRYMSGEGQRCPEWRNHTTLASIELARGYEPGSYLRRITDVPL ECCCCCCHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCE LMIVADRDTITPTDLQREAFASLATEKALLEVEGGHYAVYQEHFDKTSSAAAEWFASHLK EEEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916281 [H]