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The map label for this gene is ctpA [H]

Identifier: 182679842

GI number: 182679842

Start: 3342343

End: 3343680

Strand: Reverse

Name: ctpA [H]

Synonym: Bind_2931

Alternate gene names: 182679842

Gene position: 3343680-3342343 (Counterclockwise)

Preceding gene: 182679843

Following gene: 182679841

Centisome position: 80.18

GC content: 57.32

Gene sequence:

>1338_bases
ATGCGCAAGGTTACCCTGGTTATGCTCGGCGCCTTTCTGGGGGCGTCCATCGCTACCCTTGATCATCAGGTGTGGTTGTC
GCCCGAAGGCGCGGCGCGCGCCGCCGCTTCAGATACCTATCGCAATCTCAATCTCTTCGGCGATGTTTTTGAGAAGATCC
GCTCCGATTATGTCGAAAAGCCAGACGAGCAGAAACTCGTTGAGGCGGCCATCAATGGCATGCTGACCTCGCTTGATCCG
CATTCTACTTATATGGACGCCAAAAGCTTCCGCGACATGCAGGTGCAGACCCATGGCGAGTTCGGTGGGCTCGGCATCGA
AGTCACGCAGGAAGATGGTCTGATCAAGGTCGTCACGCCGATCGACGATACGCCGGCAGCCAAGGCCGGCATTCTCGCCG
GCGATATCATCACTGCGATCGATAATGAAAGCGTCCAGGGCCTGAGTCTCAATCAGGCGGTCGATAAGATGCGTGGCGCG
CCCAATACGAATGTGATCTTGAAAATCCTGCGCGGCGAAAAGAAAGATCCGCAGGATATCAAGCTGACACGCGCCATGAT
CCAGATCAAATCGGTGCGCTACCACAAGGAAGGCGACGATATCGGCTATATCCGCATCACCCAGTTCAATGAACAGACCA
CTGATGGGGTGCGCGAGGCCATTCAGAAATTCCTGTCGGAAATCCCGGCCGATAAGTTCAAGGGTTATATTCTCGATCTG
CGCAATAATCCGGGTGGTCTGCTCGATCAGTCGATCGGCGTCGCCAATGCCTTCCTCGATCACGGTGAGATCGTCTCGAC
GCGCGGCCGCAATGCCGAGGAGACGATGCGCTATAATGCGCGGCCCAACGATATTTCCAAGGGCAAGCCGATCATCGTCC
TGATCAATGGTGGCTCGGCTTCGGCGTCGGAAATCGTGGCTGGCGCGTTGCAGGATCACAAGCGGGCGACCTTGATCGGG
ACGCGGTCTTTCGGCAAGGGATCGGTGCAGACGATCATTCCGCTCGGTCAGAACGGCGCCGTCCGACTGACCACGGCGCG
TTATTACACGCCCTCCGGACGCTCGATTCAGGCCAAGGGAATCGATCCTGATATTCAGGTGCTCGAGGATGTGCCGGACG
AGCTCAAGGGCAAGGATGATTTGAAGGGTGAAGCCTCGCTCAAGGGGCACCTGAAGAATGGCGACGATGAAAAGACCGGG
TCGCAGGCCTATGTCCCGCCCGATCCCAAGAATGACAAGCAACTGATCGCGGCCGAAGAAATGCTGCGCGGCGTCTATAA
GGCATCGAATAACGTGCCTCCCCCTGCGCCCGCCGCAACCGCGAAGGTTCCGAATTAA

Upstream 100 bases:

>100_bases
CGCCACAACCCATCCTCTATGTCGAATTCCGAAAGGATGGAGTGGCTATTGATCCTGGTCCATGGTGGATGAAACCGGAA
TTGCAGAAGGTTCGCGGATA

Downstream 100 bases:

>100_bases
TGAAATCCGGCCCCGAAGCGAATTCTGCTTCGGGGCTGTATCGTCTATGGCATCGCTCGTTGAATCCGACCCTCAGCGAT
GCTATTAATTTTACAAATGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MRKVTLVMLGAFLGASIATLDHQVWLSPEGAARAAASDTYRNLNLFGDVFEKIRSDYVEKPDEQKLVEAAINGMLTSLDP
HSTYMDAKSFRDMQVQTHGEFGGLGIEVTQEDGLIKVVTPIDDTPAAKAGILAGDIITAIDNESVQGLSLNQAVDKMRGA
PNTNVILKILRGEKKDPQDIKLTRAMIQIKSVRYHKEGDDIGYIRITQFNEQTTDGVREAIQKFLSEIPADKFKGYILDL
RNNPGGLLDQSIGVANAFLDHGEIVSTRGRNAEETMRYNARPNDISKGKPIIVLINGGSASASEIVAGALQDHKRATLIG
TRSFGKGSVQTIIPLGQNGAVRLTTARYYTPSGRSIQAKGIDPDIQVLEDVPDELKGKDDLKGEASLKGHLKNGDDEKTG
SQAYVPPDPKNDKQLIAAEEMLRGVYKASNNVPPPAPAATAKVPN

Sequences:

>Translated_445_residues
MRKVTLVMLGAFLGASIATLDHQVWLSPEGAARAAASDTYRNLNLFGDVFEKIRSDYVEKPDEQKLVEAAINGMLTSLDP
HSTYMDAKSFRDMQVQTHGEFGGLGIEVTQEDGLIKVVTPIDDTPAAKAGILAGDIITAIDNESVQGLSLNQAVDKMRGA
PNTNVILKILRGEKKDPQDIKLTRAMIQIKSVRYHKEGDDIGYIRITQFNEQTTDGVREAIQKFLSEIPADKFKGYILDL
RNNPGGLLDQSIGVANAFLDHGEIVSTRGRNAEETMRYNARPNDISKGKPIIVLINGGSASASEIVAGALQDHKRATLIG
TRSFGKGSVQTIIPLGQNGAVRLTTARYYTPSGRSIQAKGIDPDIQVLEDVPDELKGKDDLKGEASLKGHLKNGDDEKTG
SQAYVPPDPKNDKQLIAAEEMLRGVYKASNNVPPPAPAATAKVPN
>Mature_445_residues
MRKVTLVMLGAFLGASIATLDHQVWLSPEGAARAAASDTYRNLNLFGDVFEKIRSDYVEKPDEQKLVEAAINGMLTSLDP
HSTYMDAKSFRDMQVQTHGEFGGLGIEVTQEDGLIKVVTPIDDTPAAKAGILAGDIITAIDNESVQGLSLNQAVDKMRGA
PNTNVILKILRGEKKDPQDIKLTRAMIQIKSVRYHKEGDDIGYIRITQFNEQTTDGVREAIQKFLSEIPADKFKGYILDL
RNNPGGLLDQSIGVANAFLDHGEIVSTRGRNAEETMRYNARPNDISKGKPIIVLINGGSASASEIVAGALQDHKRATLIG
TRSFGKGSVQTIIPLGQNGAVRLTTARYYTPSGRSIQAKGIDPDIQVLEDVPDELKGKDDLKGEASLKGHLKNGDDEKTG
SQAYVPPDPKNDKQLIAAEEMLRGVYKASNNVPPPAPAATAKVPN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=320, Percent_Identity=28.4375, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48122; Mature: 48122

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVTLVMLGAFLGASIATLDHQVWLSPEGAARAAASDTYRNLNLFGDVFEKIRSDYVEK
CCEEEHHHHHHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDEQKLVEAAINGMLTSLDPHSTYMDAKSFRDMQVQTHGEFGGLGIEVTQEDGLIKVVTP
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEECC
IDDTPAAKAGILAGDIITAIDNESVQGLSLNQAVDKMRGAPNTNVILKILRGEKKDPQDI
CCCCCCCHHCEEECHHEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEECCCCCCCHHH
KLTRAMIQIKSVRYHKEGDDIGYIRITQFNEQTTDGVREAIQKFLSEIPADKFKGYILDL
HHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEE
RNNPGGLLDQSIGVANAFLDHGEIVSTRGRNAEETMRYNARPNDISKGKPIIVLINGGSA
ECCCCCCHHHHCCHHHHHHCCCCEEECCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCC
SASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGQNGAVRLTTARYYTPSGRSIQAKG
CHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEECC
IDPDIQVLEDVPDELKGKDDLKGEASLKGHLKNGDDEKTGSQAYVPPDPKNDKQLIAAEE
CCHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MLRGVYKASNNVPPPAPAATAKVPN
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKVTLVMLGAFLGASIATLDHQVWLSPEGAARAAASDTYRNLNLFGDVFEKIRSDYVEK
CCEEEHHHHHHHHCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDEQKLVEAAINGMLTSLDPHSTYMDAKSFRDMQVQTHGEFGGLGIEVTQEDGLIKVVTP
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCEEEEECC
IDDTPAAKAGILAGDIITAIDNESVQGLSLNQAVDKMRGAPNTNVILKILRGEKKDPQDI
CCCCCCCHHCEEECHHEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEECCCCCCCHHH
KLTRAMIQIKSVRYHKEGDDIGYIRITQFNEQTTDGVREAIQKFLSEIPADKFKGYILDL
HHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHCCEEEEEE
RNNPGGLLDQSIGVANAFLDHGEIVSTRGRNAEETMRYNARPNDISKGKPIIVLINGGSA
ECCCCCCHHHHCCHHHHHHCCCCEEECCCCCHHHHHEECCCCCCCCCCCCEEEEEECCCC
SASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGQNGAVRLTTARYYTPSGRSIQAKG
CHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCEEEECC
IDPDIQVLEDVPDELKGKDDLKGEASLKGHLKNGDDEKTGSQAYVPPDPKNDKQLIAAEE
CCHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
MLRGVYKASNNVPPPAPAATAKVPN
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]