| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679769
Identifier: 182679769
GI number: 182679769
Start: 3258224
End: 3259921
Strand: Reverse
Name: 182679769
Synonym: Bind_2857
Alternate gene names: NA
Gene position: 3259921-3258224 (Counterclockwise)
Preceding gene: 182679770
Following gene: 182679768
Centisome position: 78.17
GC content: 51.88
Gene sequence:
>1698_bases ATGAGTCTTATTTCATCACAAAGTTCAGGTGATTTCATTTCTGACGCCAAGACTCCGCTTCTTTCTCTTCTGGCGTTGGT GATTGTGTTTATCGGCACGGTTTCCTACGTGGGGATTTCCGGCGACTTTCCCCTGATCGACGATTGGTCCTATGCGATTT CGACGCGGATGTTAGTCGCGACGGGGACGTGGAAGCCCTTCGGCTGGACCAGTATGCCATTGATCTCCAATGCCCTTTGG GCGGCGCCAATCTGCGCTCTTTCGTCCTGCGGGTTTGATGATCTGCGCCTCACCACATTGCTGGCTTCATCATTGCTCTT CGTCATGACCTTCTTTCTGGTCAAAGCGAATAATAAGACGATGCTCGTGCCGCTCTTTGCTGCGCTGTTGCTCGCTTTCA ATCCGATTGCCTATGCGCTGTCGTTTACATTTATGACAGATATTCTATTCTCTGCCTTAGTCACAACGAGCGCCTTCCTG TTTGTCCTATCGCTTGAACGAGATTCGATTCCGCTCATTGTATTCGGGACGATCATTGCGATCCTGGCGACGTTCTCGCG CCAGCTCGGATTGTGTCTTCCTCTCGCTTTTCTGGTTGTAAGGCTCCTGCAAACAGACCGTTGGCCGAGAAAATTGATCT TGGCGTTGACGCCATTCCTTGTCTGCACGGCCTCCCTCATGCTCTTCAACCGCTGGCTTCGGGAGACAGGAAGAACCCCG GACGTCTATGACTTCCAGTTGAATCTCCTGGCGTCCACGATAAAAGCTCCGGTCCTTGAGGTGATGTCGCTCATCGGCCT GCATGTGATCGAGACGCTTCTTTATCTTGGTCTATTCAGTCTTCCGTTGCTCTTGCTGACGAGACGTCATGATATCGTCG CTGTGGATGCTCGCTCCTGGTGGCGGCACGCGCCAATCATGATCGCTGGATGTGTCACTCTTCTTGGTGTTGCCACCATG TGGGCTAGACATCAGATCATGCCATTGTTCGGTGATATCCTCGTCCCCCAGGGGATAGGGCCCCTTTTGCTCCGCGATAC TTTCGAACTCCACTTGCCGAATGTTCCGTCGCTGCCTTCTTTCTTCTGGATTGTGGTCACTTTGCTCAGTCTGTGGGGCG TTTTTGAACTGAGCCGCCGCACGGTGACTTATATGATAAATATCATCCAGAAAGTGCGATACGGGGAGCACAATCCAAAT GCGTCAGGGCCGCTGTTCGCCATGATCGCTATCCTTGCCTATCTCGCCCCCCTCATGCTGTCCGGATTATTTGATCGTTA TCTCATTCCAGTTCTGCCACTGACCTTCTTCTTTTTGACGAGCATCTCGGTGGCTGGGCCTGTCGATCGCCATCATATTC TGATTGCGACATTGATGTGTCTGCTGACCATTGCATTTACGGTGCTGACGAATCATGACCATATGGCCTGGAACCGAGCG CGGTGGGCGGCAATTACCGACGCCCAGAGCGAAGGGATTGCGGGTCCCGATAATCTCGATGGCGGATTCGAATATAACGG ATTCTTTTCCTACAGCCCTTCGTATAAGGAAAGTCATGAAAAGAGCCATTGGTGGGTTGGCAGGGATGACTATCAAATTG CATTTGGTCCTATTGATGGGATGAAGGTCGTCAAGAGCTACTCGTATGAGACGGCGCTCCCATCCACAAAGCGATCGATC CTGCTTCTGGCTCGTTAA
Upstream 100 bases:
>100_bases GGTGCGGCCGATGATAGCGATCACTCAGCCAGCGGTGCGGTGTGCTGTATCCAGCCCCGTTTGTTCTCGATAGACTTCAG AGAGATTGGAGAATTTTGCG
Downstream 100 bases:
>100_bases GTCACCAAAAGGCTCAATCCGATAATATTGAGTTGGATTAATGAGGCGCGCCTCGTCCAACACTATAGCGGTGTGAAATG CATCGCCGCATCATGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSLISSQSSGDFISDAKTPLLSLLALVIVFIGTVSYVGISGDFPLIDDWSYAISTRMLVATGTWKPFGWTSMPLISNALW AAPICALSSCGFDDLRLTTLLASSLLFVMTFFLVKANNKTMLVPLFAALLLAFNPIAYALSFTFMTDILFSALVTTSAFL FVLSLERDSIPLIVFGTIIAILATFSRQLGLCLPLAFLVVRLLQTDRWPRKLILALTPFLVCTASLMLFNRWLRETGRTP DVYDFQLNLLASTIKAPVLEVMSLIGLHVIETLLYLGLFSLPLLLLTRRHDIVAVDARSWWRHAPIMIAGCVTLLGVATM WARHQIMPLFGDILVPQGIGPLLLRDTFELHLPNVPSLPSFFWIVVTLLSLWGVFELSRRTVTYMINIIQKVRYGEHNPN ASGPLFAMIAILAYLAPLMLSGLFDRYLIPVLPLTFFFLTSISVAGPVDRHHILIATLMCLLTIAFTVLTNHDHMAWNRA RWAAITDAQSEGIAGPDNLDGGFEYNGFFSYSPSYKESHEKSHWWVGRDDYQIAFGPIDGMKVVKSYSYETALPSTKRSI LLLAR
Sequences:
>Translated_565_residues MSLISSQSSGDFISDAKTPLLSLLALVIVFIGTVSYVGISGDFPLIDDWSYAISTRMLVATGTWKPFGWTSMPLISNALW AAPICALSSCGFDDLRLTTLLASSLLFVMTFFLVKANNKTMLVPLFAALLLAFNPIAYALSFTFMTDILFSALVTTSAFL FVLSLERDSIPLIVFGTIIAILATFSRQLGLCLPLAFLVVRLLQTDRWPRKLILALTPFLVCTASLMLFNRWLRETGRTP DVYDFQLNLLASTIKAPVLEVMSLIGLHVIETLLYLGLFSLPLLLLTRRHDIVAVDARSWWRHAPIMIAGCVTLLGVATM WARHQIMPLFGDILVPQGIGPLLLRDTFELHLPNVPSLPSFFWIVVTLLSLWGVFELSRRTVTYMINIIQKVRYGEHNPN ASGPLFAMIAILAYLAPLMLSGLFDRYLIPVLPLTFFFLTSISVAGPVDRHHILIATLMCLLTIAFTVLTNHDHMAWNRA RWAAITDAQSEGIAGPDNLDGGFEYNGFFSYSPSYKESHEKSHWWVGRDDYQIAFGPIDGMKVVKSYSYETALPSTKRSI LLLAR >Mature_564_residues SLISSQSSGDFISDAKTPLLSLLALVIVFIGTVSYVGISGDFPLIDDWSYAISTRMLVATGTWKPFGWTSMPLISNALWA APICALSSCGFDDLRLTTLLASSLLFVMTFFLVKANNKTMLVPLFAALLLAFNPIAYALSFTFMTDILFSALVTTSAFLF VLSLERDSIPLIVFGTIIAILATFSRQLGLCLPLAFLVVRLLQTDRWPRKLILALTPFLVCTASLMLFNRWLRETGRTPD VYDFQLNLLASTIKAPVLEVMSLIGLHVIETLLYLGLFSLPLLLLTRRHDIVAVDARSWWRHAPIMIAGCVTLLGVATMW ARHQIMPLFGDILVPQGIGPLLLRDTFELHLPNVPSLPSFFWIVVTLLSLWGVFELSRRTVTYMINIIQKVRYGEHNPNA SGPLFAMIAILAYLAPLMLSGLFDRYLIPVLPLTFFFLTSISVAGPVDRHHILIATLMCLLTIAFTVLTNHDHMAWNRAR WAAITDAQSEGIAGPDNLDGGFEYNGFFSYSPSYKESHEKSHWWVGRDDYQIAFGPIDGMKVVKSYSYETALPSTKRSIL LLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62946; Mature: 62815
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLISSQSSGDFISDAKTPLLSLLALVIVFIGTVSYVGISGDFPLIDDWSYAISTRMLVA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHEEEEE TGTWKPFGWTSMPLISNALWAAPICALSSCGFDDLRLTTLLASSLLFVMTFFLVKANNKT ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE MLVPLFAALLLAFNPIAYALSFTFMTDILFSALVTTSAFLFVLSLERDSIPLIVFGTIIA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHH ILATFSRQLGLCLPLAFLVVRLLQTDRWPRKLILALTPFLVCTASLMLFNRWLRETGRTP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVYDFQLNLLASTIKAPVLEVMSLIGLHVIETLLYLGLFSLPLLLLTRRHDIVAVDARSW CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH WRHAPIMIAGCVTLLGVATMWARHQIMPLFGDILVPQGIGPLLLRDTFELHLPNVPSLPS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHEECCCCCCCHH FFWIVVTLLSLWGVFELSRRTVTYMINIIQKVRYGEHNPNASGPLFAMIAILAYLAPLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH SGLFDRYLIPVLPLTFFFLTSISVAGPVDRHHILIATLMCLLTIAFTVLTNHDHMAWNRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCH RWAAITDAQSEGIAGPDNLDGGFEYNGFFSYSPSYKESHEKSHWWVGRDDYQIAFGPIDG HEEEEECCCCCCCCCCCCCCCCCEECCEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCH MKVVKSYSYETALPSTKRSILLLAR HHHHHHCCHHHCCCCCCCCEEEEEC >Mature Secondary Structure SLISSQSSGDFISDAKTPLLSLLALVIVFIGTVSYVGISGDFPLIDDWSYAISTRMLVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHEEEEE TGTWKPFGWTSMPLISNALWAAPICALSSCGFDDLRLTTLLASSLLFVMTFFLVKANNKT ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE MLVPLFAALLLAFNPIAYALSFTFMTDILFSALVTTSAFLFVLSLERDSIPLIVFGTIIA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHH ILATFSRQLGLCLPLAFLVVRLLQTDRWPRKLILALTPFLVCTASLMLFNRWLRETGRTP HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVYDFQLNLLASTIKAPVLEVMSLIGLHVIETLLYLGLFSLPLLLLTRRHDIVAVDARSW CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH WRHAPIMIAGCVTLLGVATMWARHQIMPLFGDILVPQGIGPLLLRDTFELHLPNVPSLPS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHEECCCCCCCHH FFWIVVTLLSLWGVFELSRRTVTYMINIIQKVRYGEHNPNASGPLFAMIAILAYLAPLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH SGLFDRYLIPVLPLTFFFLTSISVAGPVDRHHILIATLMCLLTIAFTVLTNHDHMAWNRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCH RWAAITDAQSEGIAGPDNLDGGFEYNGFFSYSPSYKESHEKSHWWVGRDDYQIAFGPIDG HEEEEECCCCCCCCCCCCCCCCCEECCEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCH MKVVKSYSYETALPSTKRSILLLAR HHHHHHCCHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA