| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is apr [H]
Identifier: 182679768
GI number: 182679768
Start: 3256219
End: 3257643
Strand: Reverse
Name: apr [H]
Synonym: Bind_2856
Alternate gene names: 182679768
Gene position: 3257643-3256219 (Counterclockwise)
Preceding gene: 182679769
Following gene: 182679767
Centisome position: 78.12
GC content: 61.82
Gene sequence:
>1425_bases ATGGCGGCAGGGGGGATGCTGGTCAAGGTTCGTGGCGATGGCAGAGCCTTTGCCATGGCGACACAGCAGGCTTTCGGCGC GGGTGGTGTCGAGGTCAAACCGATCTTGACCATTCCCGCCGGCGTGACGGGTATGGGTCTCGCCCCTTCGAGTGGAGCGA CCTGGCTGCATGTCTCGGCACTGAGCCAGGGCGAGGAGAATCCGTGGGATGCTGCGCATCAGCTGATGGTGCCTGGAAGT AGTTTCGCGGCGGCTACAGGTGCCGCCGGAGCGGATGTCGAACTGATTGAACCTGACATCGAGCAAAGATGGCCTTGGCA GCAGGAGGCTGGCGCTGTGCCTGGCCCAGGCCTTACTGAGGCAGCGGATCGCTGCACATTCATCGATCAGGATGGCAAAG GAACCAAAGCGGAGGGGCCGGGATTCGCCTGGAGCCTCAATGACGCGTTCTCCGAGCTTGCCAAGGCGCGAGCCGGGCTT GGAGTGGACCTTGAAAAGAAGCTCAATCAGGTCATTATCGCCCATCTCGATACGGGTTATGATCCGCATCATGTGACTCG GCCGATCAACCTCGACACAAAGCTCCAGCGCAGCTTTGTCGATGGCGACCCAGACCCGCACGATGCTTCCGACCATACGC CGGATGGCCTGGGAGCTGTCCGCAATCGCGGCCACGGCACGGCGACGCTAGCGCTTCTCGCCGGCAACCGCCTTGACGGC ACCTTGCCGGATTGGTCCGGTTTCAAGGATTTCATCGGAGGAGCGCCCTTTGCCCGTGTGATCCCCATTCGGATCGCCAA TTGGGTCGTGCGCTTTACGACCAGCACCATGGTCCAGGGGATCGAGCATGCCCGCCAGAATGGCGCGCAGATTCTCTCCA TGAGCATGGGCGGCCTGACCTCCGCCGCTCTCGTTGATGCGATCAATCTCGCCTATGACGCGGGGATGTTTCTCGTCACG GCGGCGGGCAATAATCTGGCCGGCAGGCTGACACCGAAATCGATTGTCTTCCCGGCTCGCTACCGGCGTGTGCTCGCTGC TTGCGGCGTGATGGCGGATGGTCGTGCCTATGCCGGCCTCGCGCCGCCAACGATGCAGGGTAATTATGGTCCGTCCAGCA AGATGGCGACGGCGCTCGGTGCCTATACGCCGAATGTCGCCTGGGCGATAATTGATTGCGGCAAGATGGTTGACATGAAC GGAGCGGGCACCTCCTCGGCGACGCCACAAATCGCGGCGGCGGCTGCTTTATGGCTCGCCGAGCATGGGCCTTTGGTGGC CCAATATCCAGAACCCTGGATGCTTTGGGGGGAAGCGCTCCGTCCGGCAGAATGCCTGTTCCATTGGTTGCGAGGCGGAT CAGATCGCACGTGCGATGGTCGACAATCTTCAGGAAGGCGCGGAACACCGCCGAGATGTATCTGA
Upstream 100 bases:
>100_bases TTCGTTGACGTTTATACTGATCGGTTGGGGGAATGTGAGCATCGGGCTGATCGAGCTTTGAACGTCTGATGCTCGCGAAA AATCATCGGGAGGCACGATC
Downstream 100 bases:
>100_bases CCGCCGTCACTAGGGGCTGGCCGGTCGAGCGTGCGCTTGCGCGAGTGCCTTCGCCTTCAATTCCGCGAGCAGCGAGGGTT TTGACTATGCCGCGCCGTTC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MAAGGMLVKVRGDGRAFAMATQQAFGAGGVEVKPILTIPAGVTGMGLAPSSGATWLHVSALSQGEENPWDAAHQLMVPGS SFAAATGAAGADVELIEPDIEQRWPWQQEAGAVPGPGLTEAADRCTFIDQDGKGTKAEGPGFAWSLNDAFSELAKARAGL GVDLEKKLNQVIIAHLDTGYDPHHVTRPINLDTKLQRSFVDGDPDPHDASDHTPDGLGAVRNRGHGTATLALLAGNRLDG TLPDWSGFKDFIGGAPFARVIPIRIANWVVRFTTSTMVQGIEHARQNGAQILSMSMGGLTSAALVDAINLAYDAGMFLVT AAGNNLAGRLTPKSIVFPARYRRVLAACGVMADGRAYAGLAPPTMQGNYGPSSKMATALGAYTPNVAWAIIDCGKMVDMN GAGTSSATPQIAAAAALWLAEHGPLVAQYPEPWMLWGEALRPAECLFHWLRGGSDRTCDGRQSSGRRGTPPRCI
Sequences:
>Translated_474_residues MAAGGMLVKVRGDGRAFAMATQQAFGAGGVEVKPILTIPAGVTGMGLAPSSGATWLHVSALSQGEENPWDAAHQLMVPGS SFAAATGAAGADVELIEPDIEQRWPWQQEAGAVPGPGLTEAADRCTFIDQDGKGTKAEGPGFAWSLNDAFSELAKARAGL GVDLEKKLNQVIIAHLDTGYDPHHVTRPINLDTKLQRSFVDGDPDPHDASDHTPDGLGAVRNRGHGTATLALLAGNRLDG TLPDWSGFKDFIGGAPFARVIPIRIANWVVRFTTSTMVQGIEHARQNGAQILSMSMGGLTSAALVDAINLAYDAGMFLVT AAGNNLAGRLTPKSIVFPARYRRVLAACGVMADGRAYAGLAPPTMQGNYGPSSKMATALGAYTPNVAWAIIDCGKMVDMN GAGTSSATPQIAAAAALWLAEHGPLVAQYPEPWMLWGEALRPAECLFHWLRGGSDRTCDGRQSSGRRGTPPRCI >Mature_473_residues AAGGMLVKVRGDGRAFAMATQQAFGAGGVEVKPILTIPAGVTGMGLAPSSGATWLHVSALSQGEENPWDAAHQLMVPGSS FAAATGAAGADVELIEPDIEQRWPWQQEAGAVPGPGLTEAADRCTFIDQDGKGTKAEGPGFAWSLNDAFSELAKARAGLG VDLEKKLNQVIIAHLDTGYDPHHVTRPINLDTKLQRSFVDGDPDPHDASDHTPDGLGAVRNRGHGTATLALLAGNRLDGT LPDWSGFKDFIGGAPFARVIPIRIANWVVRFTTSTMVQGIEHARQNGAQILSMSMGGLTSAALVDAINLAYDAGMFLVTA AGNNLAGRLTPKSIVFPARYRRVLAACGVMADGRAYAGLAPPTMQGNYGPSSKMATALGAYTPNVAWAIIDCGKMVDMNG AGTSSATPQIAAAAALWLAEHGPLVAQYPEPWMLWGEALRPAECLFHWLRGGSDRTCDGRQSSGRRGTPPRCI
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 49668; Mature: 49537
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGGMLVKVRGDGRAFAMATQQAFGAGGVEVKPILTIPAGVTGMGLAPSSGATWLHVSA CCCCCEEEEEECCCCEEEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE LSQGEENPWDAAHQLMVPGSSFAAATGAAGADVELIEPDIEQRWPWQQEAGAVPGPGLTE HHCCCCCCHHHHHEEECCCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHCCCCCCCCCHH AADRCTFIDQDGKGTKAEGPGFAWSLNDAFSELAKARAGLGVDLEKKLNQVIIAHLDTGY HHHHCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCCC DPHHVTRPINLDTKLQRSFVDGDPDPHDASDHTPDGLGAVRNRGHGTATLALLAGNRLDG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCC TLPDWSGFKDFIGGAPFARVIPIRIANWVVRFTTSTMVQGIEHARQNGAQILSMSMGGLT CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH SAALVDAINLAYDAGMFLVTAAGNNLAGRLTPKSIVFPARYRRVLAACGVMADGRAYAGL HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCEECCC APPTMQGNYGPSSKMATALGAYTPNVAWAIIDCGKMVDMNGAGTSSATPQIAAAAALWLA CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHH EHGPLVAQYPEPWMLWGEALRPAECLFHWLRGGSDRTCDGRQSSGRRGTPPRCI HCCCEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AAGGMLVKVRGDGRAFAMATQQAFGAGGVEVKPILTIPAGVTGMGLAPSSGATWLHVSA CCCCEEEEEECCCCEEEEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEE LSQGEENPWDAAHQLMVPGSSFAAATGAAGADVELIEPDIEQRWPWQQEAGAVPGPGLTE HHCCCCCCHHHHHEEECCCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHCCCCCCCCCHH AADRCTFIDQDGKGTKAEGPGFAWSLNDAFSELAKARAGLGVDLEKKLNQVIIAHLDTGY HHHHCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCCC DPHHVTRPINLDTKLQRSFVDGDPDPHDASDHTPDGLGAVRNRGHGTATLALLAGNRLDG CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCC TLPDWSGFKDFIGGAPFARVIPIRIANWVVRFTTSTMVQGIEHARQNGAQILSMSMGGLT CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH SAALVDAINLAYDAGMFLVTAAGNNLAGRLTPKSIVFPARYRRVLAACGVMADGRAYAGL HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCCEECCC APPTMQGNYGPSSKMATALGAYTPNVAWAIIDCGKMVDMNGAGTSSATPQIAAAAALWLA CCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHH EHGPLVAQYPEPWMLWGEALRPAECLFHWLRGGSDRTCDGRQSSGRRGTPPRCI HCCCEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6420308; 9826175 [H]