| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is fabG [H]
Identifier: 182679729
GI number: 182679729
Start: 3208519
End: 3209292
Strand: Reverse
Name: fabG [H]
Synonym: Bind_2817
Alternate gene names: 182679729
Gene position: 3209292-3208519 (Counterclockwise)
Preceding gene: 182679733
Following gene: 182679726
Centisome position: 76.96
GC content: 57.24
Gene sequence:
>774_bases ATGGCCGATCATAGGATCAAGGGAAAGACGGTGCTCATCGCAGGCGGCGCCAAAAATCTCGGCGGCTTGATCGCCCGCGA TTTGGCGGAGCAGGGTGCCAAAGCTGTGGCCATCCATTACAATAGTGCCGCGACCACGGCTGAGGCGGAGAAAACCATCG CTGCAATCAAGACAGCCGGCGCCCAGGCATTCGCCTTCCAGGCCGATCTGACCACGGCCGGTGCAGTGGAAAAACTTTTT GCCGATACGATCGCCGCGGTTGGCAAGCCGGATATTGCCATCAATACGGTCGGCAAGGTTTTGAAAAAGCCTTTCGTCGA GATTTCCGAGGCTGAATATGACGAAATGGCTGCGGTAAATGCCAAAACCGCTTTCTTCTTCATCAAGGAAGCCGGCAAAC ATCTGAACGACAACGGCAAGCTCGTGACGCTCGTCACCTCCCTGCTCGGCGCTTTCACGCCCTTTTATGCGGCTTATGCC GGCACCAAGGCGCCAGTCGAGCATTTCACCCGTGCAGCGTCCAAGGAGTTTGGCGAACGCGGCATTTCGGTGACGGCGGT TGGCCCCGGCCCGATGGATACGCCGTTCTTTTATCCGGCCGAGGGCGCGGATGCTGTCGCCTATCACAAGACAGCGGCGG CGCTCTCCCAATTCTCCAAAACTGGCCTGACCGATATTGAGGATATCGTGCCCTTCATTCGATTTCTCGTCTCGGACGGA TGGTGGATTACCGGCCAGACCATCCTCATCAATGGTGGTTACACGACGAAGTGA
Upstream 100 bases:
>100_bases GTCAGCAAAAGCATCTTTATACGTTAGAATAGACAAATAGCCTCCCCTTGGGAAAGTGGGCGTCAGGTTGCCCGCTCGAT TCAAGGCAGGAGAACACGGC
Downstream 100 bases:
>100_bases TCCTCAGATGGCCAGATGATCAGTGAGGTTTTTAAATGATGAGAGCAGCCGTGGAAACAAGAGGATGCGGTTTGCTCTCC CTCGCTGAGCCGGTGATCTT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MADHRIKGKTVLIAGGAKNLGGLIARDLAEQGAKAVAIHYNSAATTAEAEKTIAAIKTAGAQAFAFQADLTTAGAVEKLF ADTIAAVGKPDIAINTVGKVLKKPFVEISEAEYDEMAAVNAKTAFFFIKEAGKHLNDNGKLVTLVTSLLGAFTPFYAAYA GTKAPVEHFTRAASKEFGERGISVTAVGPGPMDTPFFYPAEGADAVAYHKTAAALSQFSKTGLTDIEDIVPFIRFLVSDG WWITGQTILINGGYTTK
Sequences:
>Translated_257_residues MADHRIKGKTVLIAGGAKNLGGLIARDLAEQGAKAVAIHYNSAATTAEAEKTIAAIKTAGAQAFAFQADLTTAGAVEKLF ADTIAAVGKPDIAINTVGKVLKKPFVEISEAEYDEMAAVNAKTAFFFIKEAGKHLNDNGKLVTLVTSLLGAFTPFYAAYA GTKAPVEHFTRAASKEFGERGISVTAVGPGPMDTPFFYPAEGADAVAYHKTAAALSQFSKTGLTDIEDIVPFIRFLVSDG WWITGQTILINGGYTTK >Mature_256_residues ADHRIKGKTVLIAGGAKNLGGLIARDLAEQGAKAVAIHYNSAATTAEAEKTIAAIKTAGAQAFAFQADLTTAGAVEKLFA DTIAAVGKPDIAINTVGKVLKKPFVEISEAEYDEMAAVNAKTAFFFIKEAGKHLNDNGKLVTLVTSLLGAFTPFYAAYAG TKAPVEHFTRAASKEFGERGISVTAVGPGPMDTPFFYPAEGADAVAYHKTAAALSQFSKTGLTDIEDIVPFIRFLVSDGW WITGQTILINGGYTTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=264, Percent_Identity=26.5151515151515, Blast_Score=82, Evalue=5e-16, Organism=Escherichia coli, GI1789208, Length=261, Percent_Identity=26.0536398467433, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=26.4822134387352, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI87082160, Length=260, Percent_Identity=26.1538461538462, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790717, Length=196, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI87082100, Length=268, Percent_Identity=25.7462686567164, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI2367365, Length=189, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=27.0588235294118, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789378, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=24.8031496062992, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=26.7716535433071, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=26.5917602996255, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=27.3408239700375, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=25.8426966292135, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=24.2063492063492, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17544670, Length=274, Percent_Identity=28.1021897810219, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=25.1968503937008, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=24.4274809160305, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=25.8426966292135, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=25.2830188679245, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=26.6917293233083, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=26.615969581749, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=25, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=29.4117647058824, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI21355319, Length=265, Percent_Identity=27.9245283018868, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=27.3809523809524, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=26.3779527559055, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=25, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=26.2745098039216, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=25.4980079681275, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27009; Mature: 26878
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHRIKGKTVLIAGGAKNLGGLIARDLAEQGAKAVAIHYNSAATTAEAEKTIAAIKTAG CCCCEECCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCC AQAFAFQADLTTAGAVEKLFADTIAAVGKPDIAINTVGKVLKKPFVEISEAEYDEMAAVN CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHCCCCHHHHHHCC AKTAFFFIKEAGKHLNDNGKLVTLVTSLLGAFTPFYAAYAGTKAPVEHFTRAASKEFGER CHHHHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GISVTAVGPGPMDTPFFYPAEGADAVAYHKTAAALSQFSKTGLTDIEDIVPFIRFLVSDG CCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC WWITGQTILINGGYTTK EEEECCEEEEECCCCCC >Mature Secondary Structure ADHRIKGKTVLIAGGAKNLGGLIARDLAEQGAKAVAIHYNSAATTAEAEKTIAAIKTAG CCCEECCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCC AQAFAFQADLTTAGAVEKLFADTIAAVGKPDIAINTVGKVLKKPFVEISEAEYDEMAAVN CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHCCCCHHHHHHCC AKTAFFFIKEAGKHLNDNGKLVTLVTSLLGAFTPFYAAYAGTKAPVEHFTRAASKEFGER CHHHHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC GISVTAVGPGPMDTPFFYPAEGADAVAYHKTAAALSQFSKTGLTDIEDIVPFIRFLVSDG CCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC WWITGQTILINGGYTTK EEEECCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA