| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679598
Identifier: 182679598
GI number: 182679598
Start: 3057114
End: 3058142
Strand: Reverse
Name: 182679598
Synonym: Bind_2683
Alternate gene names: NA
Gene position: 3058142-3057114 (Counterclockwise)
Preceding gene: 182679599
Following gene: 182679597
Centisome position: 73.33
GC content: 61.03
Gene sequence:
>1029_bases ATGCGTAATCTCATCACCGATGTACCGGGGCTCTTGGTTGGCCATTGTCATGATGAGCAACGTGCGTCCGGTGTCTCCGC TGTCATTTTCGAAGCGCCCGCGCGTGCTTCCCTCGCGGTCCATGGTGGGGCGCCAGGCGTGCGTGATACCGCTCTTCTTG AACCGGAACGGACTGTTCAGAGGGTCGATGCCTTGGTCCTTTCGGGCGGTTCAGCCTTCGGTCTTGATGCGATGGGGGGC GTGCAGGCATGGCTCCGTTCCCGTGGGCGTGGCTATGCGGTCGGCAATGTTCTGGTGCCGATTGTCCCAGGAGCGATTCT TTTCGATCTCTTGAATGGTGGGGATAAGGATTGGGGTGAGGAGCCATTCTATTGGTATTTAGGACGGCTTTGCTGTGAGC GTGCCGCAGCCGACTTTGGTCTTGGCAGTGTGGGCGCGGGTTATGGGGCGACGACCGCCGATCTCAAAGGAGGACTCGGC TCGGCAAGTGTTCTGACATCCGCTGGTTTTCATGTCGGGGCTCTCGTGGCGGTTAATGCGTTGGGAACCGCGACGATTGG CGGTGGGCCGCATTTCTGGGCGGCGCCTTACGAGCAGGGGAGGGAGTTTGGCGGGCTGGGCTTTCCGTCTTCCTTGCCGC CCGAAGCTTTGGCGATCCGCCTCAAAGGCGATGGTGCGGCCGCTTCCATCGGACAGAACACCACGATTGCCATTGTTGCG ACGGATGCCGATCTGACCAAGGCCGAGGCGAAACATGTGGCCGTCATGGCGCATGACGGCATGGCGCGGGCTCTACGCCC AGCCCATGCGGCCATGGACGGTGATTTAGTGTTCGCCGCTGCAACTAGTACCGCGCGCCAGTCTCCCAGTCCGCGAGAAT TGACGGAAATAGGTGCGCTCGCCGCTGATTGCCTGGCCCGCGCCATTGCTCGCGCCATTTATGAAGCGACAGCCTTGCCT TTTCCGGGTGCCTTGCCCAGTTGGCGCGACAGATTTGACACTCTGGACAGGCGCGGCAGCCTAGCTTAA
Upstream 100 bases:
>100_bases TGATATGAATTGGTTCTGCTCCATTTCCTACTGGAAATAAGCGTACATCGTGTACGGCAGGGGTTTCCATTTCGGAAGAG CTTCCAAAGGGCGTTTGCGT
Downstream 100 bases:
>100_bases TTCATCGAATGACGCCCTAGTTTAGAGAAAGCTGGAGCAGGCCGCCTGATTCCGATTTAAAGAGATGCTCTCGAGCATTT CCAGCGAAGCGAATGCCCTT
Product: peptidase S58 DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRNLITDVPGLLVGHCHDEQRASGVSAVIFEAPARASLAVHGGAPGVRDTALLEPERTVQRVDALVLSGGSAFGLDAMGG VQAWLRSRGRGYAVGNVLVPIVPGAILFDLLNGGDKDWGEEPFYWYLGRLCCERAAADFGLGSVGAGYGATTADLKGGLG SASVLTSAGFHVGALVAVNALGTATIGGGPHFWAAPYEQGREFGGLGFPSSLPPEALAIRLKGDGAAASIGQNTTIAIVA TDADLTKAEAKHVAVMAHDGMARALRPAHAAMDGDLVFAAATSTARQSPSPRELTEIGALAADCLARAIARAIYEATALP FPGALPSWRDRFDTLDRRGSLA
Sequences:
>Translated_342_residues MRNLITDVPGLLVGHCHDEQRASGVSAVIFEAPARASLAVHGGAPGVRDTALLEPERTVQRVDALVLSGGSAFGLDAMGG VQAWLRSRGRGYAVGNVLVPIVPGAILFDLLNGGDKDWGEEPFYWYLGRLCCERAAADFGLGSVGAGYGATTADLKGGLG SASVLTSAGFHVGALVAVNALGTATIGGGPHFWAAPYEQGREFGGLGFPSSLPPEALAIRLKGDGAAASIGQNTTIAIVA TDADLTKAEAKHVAVMAHDGMARALRPAHAAMDGDLVFAAATSTARQSPSPRELTEIGALAADCLARAIARAIYEATALP FPGALPSWRDRFDTLDRRGSLA >Mature_342_residues MRNLITDVPGLLVGHCHDEQRASGVSAVIFEAPARASLAVHGGAPGVRDTALLEPERTVQRVDALVLSGGSAFGLDAMGG VQAWLRSRGRGYAVGNVLVPIVPGAILFDLLNGGDKDWGEEPFYWYLGRLCCERAAADFGLGSVGAGYGATTADLKGGLG SASVLTSAGFHVGALVAVNALGTATIGGGPHFWAAPYEQGREFGGLGFPSSLPPEALAIRLKGDGAAASIGQNTTIAIVA TDADLTKAEAKHVAVMAHDGMARALRPAHAAMDGDLVFAAATSTARQSPSPRELTEIGALAADCLARAIARAIYEATALP FPGALPSWRDRFDTLDRRGSLA
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 35120; Mature: 35120
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLITDVPGLLVGHCHDEQRASGVSAVIFEAPARASLAVHGGAPGVRDTALLEPERTVQ CCCHHHHCCHHHEECCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCEEECHHHHHH RVDALVLSGGSAFGLDAMGGVQAWLRSRGRGYAVGNVLVPIVPGAILFDLLNGGDKDWGE HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCC EPFYWYLGRLCCERAAADFGLGSVGAGYGATTADLKGGLGSASVLTSAGFHVGALVAVNA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCHHHHHHHHHH LGTATIGGGPHFWAAPYEQGREFGGLGFPSSLPPEALAIRLKGDGAAASIGQNTTIAIVA CCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEE TDADLTKAEAKHVAVMAHDGMARALRPAHAAMDGDLVFAAATSTARQSPSPRELTEIGAL ECCCHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHH AADCLARAIARAIYEATALPFPGALPSWRDRFDTLDRRGSLA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRNLITDVPGLLVGHCHDEQRASGVSAVIFEAPARASLAVHGGAPGVRDTALLEPERTVQ CCCHHHHCCHHHEECCCCHHHHCCCEEEEEECCCCCEEEEECCCCCCCCCEEECHHHHHH RVDALVLSGGSAFGLDAMGGVQAWLRSRGRGYAVGNVLVPIVPGAILFDLLNGGDKDWGE HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCC EPFYWYLGRLCCERAAADFGLGSVGAGYGATTADLKGGLGSASVLTSAGFHVGALVAVNA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHCCCHHHHHHHHHH LGTATIGGGPHFWAAPYEQGREFGGLGFPSSLPPEALAIRLKGDGAAASIGQNTTIAIVA CCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEE TDADLTKAEAKHVAVMAHDGMARALRPAHAAMDGDLVFAAATSTARQSPSPRELTEIGAL ECCCHHHHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHH AADCLARAIARAIYEATALPFPGALPSWRDRFDTLDRRGSLA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]