| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679591
Identifier: 182679591
GI number: 182679591
Start: 3046526
End: 3048994
Strand: Reverse
Name: 182679591
Synonym: Bind_2676
Alternate gene names: NA
Gene position: 3048994-3046526 (Counterclockwise)
Preceding gene: 182679592
Following gene: 182679580
Centisome position: 73.11
GC content: 56.14
Gene sequence:
>2469_bases ATGCCTGACGATTTTCCGCGCGACCGGCCGCATCTTTTCCTTGGAGCGAACGGAAAGAGAGAACCATATCGACGGCCTAG CCAAGCGATAAACAGTCCCGACTTGCCAAATCGTGATCGGGCCGCCCATGCGGCGGCTCTGGAAGAGGCGATCACGACGG CCTTGGCGGCGGCTCGGCAGCAATTGGCCGATCAAGACGCAGCAATTGCTGCTGGCACCCCTGGCTTCTATTTGGAAATC GAACTTCCCGGCTCAGAACGCGCCGGAATCGATCAACTTGCGAATCGAACCAAGAAAATAGAACTCGTCACTGTCCGCGA TTCGGTGACCCCTGAGCAACCGCTGCTCGCCACAGTCTTCGTACCGACGAGTGCAGAAGACTATTACCTGAAGAAAGTGG AAGCTTACCGTACCAAGGAAAGCCGAAGTGGCCGTCCAACAAACGAAGCGCTTGTCACTCGTATGGAGACTGTGCGCTTG GCGACTGCACGGTCGCTTTTTACGGACGACGAAAACCTATTTCCTTCGAATCCGGCCGAACGTGTCTGGTGGGAGATATG GCTCCGCGAAGGCCGGCGTGAAATTTTTGAGCGCTTGGCTCAGGCATTGAACGCCCAGGTTAAGCCCCATGCCGTTCACT TTCCTGAGCGGGAGGTGATGCTCGCTCTTTTCAATGTCCAGGCGCTCGATCGGCTGGTCGCACATAGCGATGTTGTTGCC GAGCTTCGCAGGGCGAAGGACACGCCATCCTTCTTTATGGGGCTGGGTGGCGCGGAGCAGCGGGCATGGAGCGACGATAT TCTGGAACGCCTGGCTCCGCCTCACGATTCAAACATAGCTGTCTGTCTTCTCGATAGCGGCGTTCATCGCTCACACCCTT TGATCGAGCCAATTTTGGCCGATGTTGATTGTCACACGATCAACCCAGCGTGGGGTAAAGACGATACAGCGACATGGCAA GGGCATGGCACCCGGATGGCAGGAGTTGCTGGCTATGGTGACCTTGTCCCGATGCTAATTGGTAGCGCAACGCTCGCTCC GGCTTATAGATTGGAAAGCGTCCGTATTCTCCCACCGGCAACAGGACCAGCAAACGATCCCGACCTCTATGGTGCAATCA CAGAAGAGGCGATCGCGCGCGCTGAAGTCCAAGCGCCTCAACGACGCCGTGTCGTGGCGATGGCTGTGACAAGCACAAGC CCCTCCCGTGGTCGTCCCTCATCCTGGTCCGCCTCCATCGATCAACTCTGTTTTGAAGAGGCCAGTCAGCGGCTCATCAT TCTTTCGGCGGGAAACATCAGCATGGATTTGATGCCGGCCGATCATCTTATCCGAAATGATGTCGAGCCGATCGATGATC CGGCACAAGCGTGGAACGCCCTTTCTGTCGGAGCTTTCACAGAAAAAGTCGATATCATTGATCCGATGTTTGCCGGATAC GCGCCCATCGCGCCAGCCGGCGAATTGTCACCCCGCAGCCGCACTTCGGTGACTTGGGATCGGCAATGGCCCGTGAAGCC GGAAGTCGTTTTTGAGGGTGGCAACCTCGCGCACGATGGGACTTTTCCAGGAGAGGCAATCGACGATCTTCAACTCCTCA CCACTTATCTTCGGCCAGATCATCGTCATTTCACGACGCTTGGTGATACGAGCGCCGCGACGGCCTTGGCGGCCCGCATG GCTGGTTCGATCCTTGCCGCGCGTCCTCAATTTTGGCCTGAGACAGTAAGAGCGTTGATCGTCCATTCGGCTGAATGGAC GCCTGAGATGAGAGCGCACATCGATGCATGCCATGGATCGAAGAATCGGATTCAGGCGCTTATACGCCGATATGGTTACG GTGTTCCCGACTTTGATCGCGCCTTGATGTCAACACGCAATGATCTCACTTTGATGGTCGAAGATCACTTGCAGCCTTTT CATCGCGATGGGTCAACGACGAAGACTCGAGATATGAAATTGCATCGCCTGAAGTGGCCGCGAGAGCAACTTACGGCTCT CGGCGCTGCACAGGTCGAATTACGAGTGACATTATCCTATTTTATCGAGCCAAATCCGGGGGAGCGTGGCTGGACTCGTC GGCATCGCTATAGTTCGCACGGTCTGCGTTTTCGTGTAAAAACCGCTACTGAAACGGTAGATGAATTCAGAGCGCGGATC AATCAGGCCGCTCGTGATGAAGAAGAGGGAAGCACCCCAGCGCACGACACCGAGGAGTGGTTGCTGGGTACTTTCCGCGA TCGAGGCTCGATCCATTCCGATATTTGGTATGGGGCAGCGGCTGATCTTGCGGAACGCGATGCTATCGGCGTGTTTCCGG TCGGTGGTTGGTGGAAGGAAAAGCCCTATCTGGAGCGTTCCGATAGTAAAGCTCGGTACGCCTTGATCGTCACGATCAGG GCGCCGGGATGCGACGTTGATATCTATACTCCAGTCGAGACCCAGATCGCGGCAGAGATCGAGGTCTGA
Upstream 100 bases:
>100_bases CATTTTGAGCAACGCTAAACGGATTACGTCGAAGGCCCTCAGCGAGGCAATTGCGGAACGCCGAAGAGCGACATTAGCGA GCTGACGCGAGCGAGATTTG
Downstream 100 bases:
>100_bases AACTCTTCAGGCGGCGCGAGTATGCCGGGGTCGTTTTTAGACTTCGTCCCACGTCTCATGAGCTAAAGGTGCTGCGTTCA ATTCATCCCGCAGTATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MPDDFPRDRPHLFLGANGKREPYRRPSQAINSPDLPNRDRAAHAAALEEAITTALAAARQQLADQDAAIAAGTPGFYLEI ELPGSERAGIDQLANRTKKIELVTVRDSVTPEQPLLATVFVPTSAEDYYLKKVEAYRTKESRSGRPTNEALVTRMETVRL ATARSLFTDDENLFPSNPAERVWWEIWLREGRREIFERLAQALNAQVKPHAVHFPEREVMLALFNVQALDRLVAHSDVVA ELRRAKDTPSFFMGLGGAEQRAWSDDILERLAPPHDSNIAVCLLDSGVHRSHPLIEPILADVDCHTINPAWGKDDTATWQ GHGTRMAGVAGYGDLVPMLIGSATLAPAYRLESVRILPPATGPANDPDLYGAITEEAIARAEVQAPQRRRVVAMAVTSTS PSRGRPSSWSASIDQLCFEEASQRLIILSAGNISMDLMPADHLIRNDVEPIDDPAQAWNALSVGAFTEKVDIIDPMFAGY APIAPAGELSPRSRTSVTWDRQWPVKPEVVFEGGNLAHDGTFPGEAIDDLQLLTTYLRPDHRHFTTLGDTSAATALAARM AGSILAARPQFWPETVRALIVHSAEWTPEMRAHIDACHGSKNRIQALIRRYGYGVPDFDRALMSTRNDLTLMVEDHLQPF HRDGSTTKTRDMKLHRLKWPREQLTALGAAQVELRVTLSYFIEPNPGERGWTRRHRYSSHGLRFRVKTATETVDEFRARI NQAARDEEEGSTPAHDTEEWLLGTFRDRGSIHSDIWYGAAADLAERDAIGVFPVGGWWKEKPYLERSDSKARYALIVTIR APGCDVDIYTPVETQIAAEIEV
Sequences:
>Translated_822_residues MPDDFPRDRPHLFLGANGKREPYRRPSQAINSPDLPNRDRAAHAAALEEAITTALAAARQQLADQDAAIAAGTPGFYLEI ELPGSERAGIDQLANRTKKIELVTVRDSVTPEQPLLATVFVPTSAEDYYLKKVEAYRTKESRSGRPTNEALVTRMETVRL ATARSLFTDDENLFPSNPAERVWWEIWLREGRREIFERLAQALNAQVKPHAVHFPEREVMLALFNVQALDRLVAHSDVVA ELRRAKDTPSFFMGLGGAEQRAWSDDILERLAPPHDSNIAVCLLDSGVHRSHPLIEPILADVDCHTINPAWGKDDTATWQ GHGTRMAGVAGYGDLVPMLIGSATLAPAYRLESVRILPPATGPANDPDLYGAITEEAIARAEVQAPQRRRVVAMAVTSTS PSRGRPSSWSASIDQLCFEEASQRLIILSAGNISMDLMPADHLIRNDVEPIDDPAQAWNALSVGAFTEKVDIIDPMFAGY APIAPAGELSPRSRTSVTWDRQWPVKPEVVFEGGNLAHDGTFPGEAIDDLQLLTTYLRPDHRHFTTLGDTSAATALAARM AGSILAARPQFWPETVRALIVHSAEWTPEMRAHIDACHGSKNRIQALIRRYGYGVPDFDRALMSTRNDLTLMVEDHLQPF HRDGSTTKTRDMKLHRLKWPREQLTALGAAQVELRVTLSYFIEPNPGERGWTRRHRYSSHGLRFRVKTATETVDEFRARI NQAARDEEEGSTPAHDTEEWLLGTFRDRGSIHSDIWYGAAADLAERDAIGVFPVGGWWKEKPYLERSDSKARYALIVTIR APGCDVDIYTPVETQIAAEIEV >Mature_821_residues PDDFPRDRPHLFLGANGKREPYRRPSQAINSPDLPNRDRAAHAAALEEAITTALAAARQQLADQDAAIAAGTPGFYLEIE LPGSERAGIDQLANRTKKIELVTVRDSVTPEQPLLATVFVPTSAEDYYLKKVEAYRTKESRSGRPTNEALVTRMETVRLA TARSLFTDDENLFPSNPAERVWWEIWLREGRREIFERLAQALNAQVKPHAVHFPEREVMLALFNVQALDRLVAHSDVVAE LRRAKDTPSFFMGLGGAEQRAWSDDILERLAPPHDSNIAVCLLDSGVHRSHPLIEPILADVDCHTINPAWGKDDTATWQG HGTRMAGVAGYGDLVPMLIGSATLAPAYRLESVRILPPATGPANDPDLYGAITEEAIARAEVQAPQRRRVVAMAVTSTSP SRGRPSSWSASIDQLCFEEASQRLIILSAGNISMDLMPADHLIRNDVEPIDDPAQAWNALSVGAFTEKVDIIDPMFAGYA PIAPAGELSPRSRTSVTWDRQWPVKPEVVFEGGNLAHDGTFPGEAIDDLQLLTTYLRPDHRHFTTLGDTSAATALAARMA GSILAARPQFWPETVRALIVHSAEWTPEMRAHIDACHGSKNRIQALIRRYGYGVPDFDRALMSTRNDLTLMVEDHLQPFH RDGSTTKTRDMKLHRLKWPREQLTALGAAQVELRVTLSYFIEPNPGERGWTRRHRYSSHGLRFRVKTATETVDEFRARIN QAARDEEEGSTPAHDTEEWLLGTFRDRGSIHSDIWYGAAADLAERDAIGVFPVGGWWKEKPYLERSDSKARYALIVTIRA PGCDVDIYTPVETQIAAEIEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 91440; Mature: 91309
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDFPRDRPHLFLGANGKREPYRRPSQAINSPDLPNRDRAAHAAALEEAITTALAAARQ CCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLADQDAAIAAGTPGFYLEIELPGSERAGIDQLANRTKKIELVTVRDSVTPEQPLLATVF HHHCCCCEEEECCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCEEEEEE VPTSAEDYYLKKVEAYRTKESRSGRPTNEALVTRMETVRLATARSLFTDDENLFPSNPAE ECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RVWWEIWLREGRREIFERLAQALNAQVKPHAVHFPEREVMLALFNVQALDRLVAHSDVVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRRAKDTPSFFMGLGGAEQRAWSDDILERLAPPHDSNIAVCLLDSGVHRSHPLIEPILA HHHHCCCCCHHHHCCCCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHH DVDCHTINPAWGKDDTATWQGHGTRMAGVAGYGDLVPMLIGSATLAPAYRLESVRILPPA CCCCEECCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHCCHHCCCHHHCCEEEEECCC TGPANDPDLYGAITEEAIARAEVQAPQRRRVVAMAVTSTSPSRGRPSSWSASIDQLCFEE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH ASQRLIILSAGNISMDLMPADHLIRNDVEPIDDPAQAWNALSVGAFTEKVDIIDPMFAGY CCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCHHHHHCCEEECCHHHHHHHHCHHHHCC APIAPAGELSPRSRTSVTWDRQWPVKPEVVFEGGNLAHDGTFPGEAIDDLQLLTTYLRPD CCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC HRHFTTLGDTSAATALAARMAGSILAARPQFWPETVRALIVHSAEWTPEMRAHIDACHGS CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC KNRIQALIRRYGYGVPDFDRALMSTRNDLTLMVEDHLQPFHRDGSTTKTRDMKLHRLKWP HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCCCHHCCHHHHHCCC REQLTALGAAQVELRVTLSYFIEPNPGERGWTRRHRYSSHGLRFRVKTATETVDEFRARI HHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHH NQAARDEEEGSTPAHDTEEWLLGTFRDRGSIHSDIWYGAAADLAERDAIGVFPVGGWWKE HHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCC KPYLERSDSKARYALIVTIRAPGCDVDIYTPVETQIAAEIEV CCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEECC >Mature Secondary Structure PDDFPRDRPHLFLGANGKREPYRRPSQAINSPDLPNRDRAAHAAALEEAITTALAAARQ CCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QLADQDAAIAAGTPGFYLEIELPGSERAGIDQLANRTKKIELVTVRDSVTPEQPLLATVF HHHCCCCEEEECCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCEEEEEE VPTSAEDYYLKKVEAYRTKESRSGRPTNEALVTRMETVRLATARSLFTDDENLFPSNPAE ECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH RVWWEIWLREGRREIFERLAQALNAQVKPHAVHFPEREVMLALFNVQALDRLVAHSDVVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH ELRRAKDTPSFFMGLGGAEQRAWSDDILERLAPPHDSNIAVCLLDSGVHRSHPLIEPILA HHHHCCCCCHHHHCCCCCHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHH DVDCHTINPAWGKDDTATWQGHGTRMAGVAGYGDLVPMLIGSATLAPAYRLESVRILPPA CCCCEECCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHCCHHCCCHHHCCEEEEECCC TGPANDPDLYGAITEEAIARAEVQAPQRRRVVAMAVTSTSPSRGRPSSWSASIDQLCFEE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH ASQRLIILSAGNISMDLMPADHLIRNDVEPIDDPAQAWNALSVGAFTEKVDIIDPMFAGY CCCEEEEEECCCCEEEECCHHHHHHCCCCCCCCHHHHHCCEEECCHHHHHHHHCHHHHCC APIAPAGELSPRSRTSVTWDRQWPVKPEVVFEGGNLAHDGTFPGEAIDDLQLLTTYLRPD CCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC HRHFTTLGDTSAATALAARMAGSILAARPQFWPETVRALIVHSAEWTPEMRAHIDACHGS CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC KNRIQALIRRYGYGVPDFDRALMSTRNDLTLMVEDHLQPFHRDGSTTKTRDMKLHRLKWP HHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEHHHCCHHHCCCCCCCHHCCHHHHHCCC REQLTALGAAQVELRVTLSYFIEPNPGERGWTRRHRYSSHGLRFRVKTATETVDEFRARI HHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHHHH NQAARDEEEGSTPAHDTEEWLLGTFRDRGSIHSDIWYGAAADLAERDAIGVFPVGGWWKE HHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCC KPYLERSDSKARYALIVTIRAPGCDVDIYTPVETQIAAEIEV CCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]