Click here to switch to the map view.

The map label for this gene is xanB [H]

Identifier: 182679566

GI number: 182679566

Start: 3005143

End: 3006555

Strand: Reverse

Name: xanB [H]

Synonym: Bind_2642

Alternate gene names: 182679566

Gene position: 3006555-3005143 (Counterclockwise)

Preceding gene: 182679567

Following gene: 182679565

Centisome position: 72.1

GC content: 57.68

Gene sequence:

>1413_bases
ATGGTGAAAATTCTTCCCATCATCATGTGTGGCGGCTCCGGGACCAGGGTCTGGCCAGAATCGCGGGAAAGCCTGCCCAA
ACAATTCATTTCGCTGGTCGGAACGACCTCCACTTTCCAGTCCGTGATCGAGATCGTGTCCGACCCAATTTTCGAGACAC
CGATCGTCATTTCCAATCACGATTACCGCTTCCTCGTGTCCGAGCAATTGGCGCAGATCAACAAGGAAGCTCAAATCGTC
CTGGAACCCTGCCGGCGTGATTCCGGTCCAGCCGTGGCGGTCGCTGCGGAGCTCGCCAATCTCATCGCGCCCGAAACCGT
TGTGGCCGTTCTTGCCGCCGACCATGTCGTGCAGGATAAGAAAGGTTTCGTCACCCTGTGTCAACATGCCGCGGTCGCCG
CAGCCGAAGGTTATATTGTGACGCTCGGCATCAAGCCGACCGCGCCGGCAACGGGCTATGGCTATATCAAGACGGGCAAG
GCCGTCGTCCCTGATGGAACGGCCCTGAAGGTGGAAGCCTTTGTCGAAAAGCCCGACTTGCCCACGGCCGAGCGCTATAT
CACCGAAAACTATCTCTGGAATTCCGGTAATTTCATCTTCCGCGCCGATGTGATGCTCTCCGAATTGCAGGCTTTCGAGC
CCCAGATCGCGGAAGCCGCGATCGAAGCTGTGGCCCATTCGAAGAAGGATATGAATTTCACCCTTCTCGACGGCGAGGCC
TTCGCCAAGGCGCCGAAAAAATCCATCGACTATGCGGTCATGGAAAAAACCACCAAGGCTGCCGTGGTGCCGGCCGATAT
CGGCTGGTCGGATGTCGGCAATTGGTCGAGCGTATGGGAATTGTCCGACCGCGACGAAAAGAATAATTCGATCCGCGGCA
ACGGCCTCATTCTCGATGCGTCAAACGTTCATGTCCGCTCGGACGGGCATTTGACCACGGTCGTCGGCGTCGATGATGTC
ATCGTCGTCACGACGCAGGACGCCGTCCTGGTGCTCGACGCCAAACATGGCGACCGGGTCAAGCAGCTCGTCGACCGGCT
GAAGGAAGAAAAGCGGACCGAGGCCCTGGAACATAAAAAGTCCTACCGGCCCTGGGGCTATTATCAATCAGTCGATTCCG
GCGCGCGCCATCAGGTCAAGCGCATCGTGGTCAAGCCCGGCCAGCGCCTTTCCCTGCAGAAACATTTTCACCGCGCCGAA
CATTGGATCGTCGTTCAGGGTACGGCGGAAGTCACCCGCGACAACGAGATCCATCTCGTGCATGAAAATGAATCGATCTA
CCTGCCGATCGGCTCGGTCCACCGCCTTGTCAATCCGGGCCGCATCAATCTCGAACTGATCGAAGTCCAGACAGGCTCTT
ATCTCGGCGAGGACGATATCGTCCGCCTGCAGGACGTCTACAACCGCAACTAG

Upstream 100 bases:

>100_bases
TAGTATACATTATTGACATAACAAATACGCAGGCAATATGGCTGTTTTTGATACATCAGCCTAGTAGATATTTTCTCTTT
GAATTGGAAGGGGGTTAGCA

Downstream 100 bases:

>100_bases
AAATATGGCGTTGCTGCAAACTTTGGTTTACGATGTGTCGAGGGAAAGCTATGATTTTGTGTTTCCGATCTCGGACGCTG
TTGTTTGTCGTCAATGCCAT

Product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase

Products: NA

Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MVKILPIIMCGGSGTRVWPESRESLPKQFISLVGTTSTFQSVIEIVSDPIFETPIVISNHDYRFLVSEQLAQINKEAQIV
LEPCRRDSGPAVAVAAELANLIAPETVVAVLAADHVVQDKKGFVTLCQHAAVAAAEGYIVTLGIKPTAPATGYGYIKTGK
AVVPDGTALKVEAFVEKPDLPTAERYITENYLWNSGNFIFRADVMLSELQAFEPQIAEAAIEAVAHSKKDMNFTLLDGEA
FAKAPKKSIDYAVMEKTTKAAVVPADIGWSDVGNWSSVWELSDRDEKNNSIRGNGLILDASNVHVRSDGHLTTVVGVDDV
IVVTTQDAVLVLDAKHGDRVKQLVDRLKEEKRTEALEHKKSYRPWGYYQSVDSGARHQVKRIVVKPGQRLSLQKHFHRAE
HWIVVQGTAEVTRDNEIHLVHENESIYLPIGSVHRLVNPGRINLELIEVQTGSYLGEDDIVRLQDVYNRN

Sequences:

>Translated_470_residues
MVKILPIIMCGGSGTRVWPESRESLPKQFISLVGTTSTFQSVIEIVSDPIFETPIVISNHDYRFLVSEQLAQINKEAQIV
LEPCRRDSGPAVAVAAELANLIAPETVVAVLAADHVVQDKKGFVTLCQHAAVAAAEGYIVTLGIKPTAPATGYGYIKTGK
AVVPDGTALKVEAFVEKPDLPTAERYITENYLWNSGNFIFRADVMLSELQAFEPQIAEAAIEAVAHSKKDMNFTLLDGEA
FAKAPKKSIDYAVMEKTTKAAVVPADIGWSDVGNWSSVWELSDRDEKNNSIRGNGLILDASNVHVRSDGHLTTVVGVDDV
IVVTTQDAVLVLDAKHGDRVKQLVDRLKEEKRTEALEHKKSYRPWGYYQSVDSGARHQVKRIVVKPGQRLSLQKHFHRAE
HWIVVQGTAEVTRDNEIHLVHENESIYLPIGSVHRLVNPGRINLELIEVQTGSYLGEDDIVRLQDVYNRN
>Mature_470_residues
MVKILPIIMCGGSGTRVWPESRESLPKQFISLVGTTSTFQSVIEIVSDPIFETPIVISNHDYRFLVSEQLAQINKEAQIV
LEPCRRDSGPAVAVAAELANLIAPETVVAVLAADHVVQDKKGFVTLCQHAAVAAAEGYIVTLGIKPTAPATGYGYIKTGK
AVVPDGTALKVEAFVEKPDLPTAERYITENYLWNSGNFIFRADVMLSELQAFEPQIAEAAIEAVAHSKKDMNFTLLDGEA
FAKAPKKSIDYAVMEKTTKAAVVPADIGWSDVGNWSSVWELSDRDEKNNSIRGNGLILDASNVHVRSDGHLTTVVGVDDV
IVVTTQDAVLVLDAKHGDRVKQLVDRLKEEKRTEALEHKKSYRPWGYYQSVDSGARHQVKRIVVKPGQRLSLQKHFHRAE
HWIVVQGTAEVTRDNEIHLVHENESIYLPIGSVHRLVNPGRINLELIEVQTGSYLGEDDIVRLQDVYNRN

Specific function: Involved in xanthan production [H]

COG id: COG0836

COG function: function code M; Mannose-1-phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788362, Length=473, Percent_Identity=48.4143763213531, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR006375
- InterPro:   IPR001538
- InterPro:   IPR005835
- InterPro:   IPR014710 [H]

Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]

EC number: =5.3.1.8; =2.7.7.13 [H]

Molecular weight: Translated: 51925; Mature: 51925

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKILPIIMCGGSGTRVWPESRESLPKQFISLVGTTSTFQSVIEIVSDPIFETPIVISNH
CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECC
DYRFLVSEQLAQINKEAQIVLEPCRRDSGPAVAVAAELANLIAPETVVAVLAADHVVQDK
CEEEHHHHHHHHCCCCCEEEEEHHCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHCCC
KGFVTLCQHAAVAAAEGYIVTLGIKPTAPATGYGYIKTGKAVVPDGTALKVEAFVEKPDL
CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCEECCCCCEEEEEEEECCCCC
PTAERYITENYLWNSGNFIFRADVMLSELQAFEPQIAEAAIEAVAHSKKDMNFTLLDGEA
CHHHHHHHHCEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCHH
FAKAPKKSIDYAVMEKTTKAAVVPADIGWSDVGNWSSVWELSDRDEKNNSIRGNGLILDA
HHCCCHHHCCHHHHHCCCCEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEC
SNVHVRSDGHLTTVVGVDDVIVVTTQDAVLVLDAKHGDRVKQLVDRLKEEKRTEALEHKK
CCEEEECCCCEEEEEECCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
SYRPWGYYQSVDSGARHQVKRIVVKPGQRLSLQKHFHRAEHWIVVQGTAEVTRDNEIHLV
CCCCCCCHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCEEEEEECCHHHCCCCEEEEE
HENESIYLPIGSVHRLVNPGRINLELIEVQTGSYLGEDDIVRLQDVYNRN
ECCCEEEEECHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEHHHHCCC
>Mature Secondary Structure
MVKILPIIMCGGSGTRVWPESRESLPKQFISLVGTTSTFQSVIEIVSDPIFETPIVISNH
CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECC
DYRFLVSEQLAQINKEAQIVLEPCRRDSGPAVAVAAELANLIAPETVVAVLAADHVVQDK
CEEEHHHHHHHHCCCCCEEEEEHHCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHCCC
KGFVTLCQHAAVAAAEGYIVTLGIKPTAPATGYGYIKTGKAVVPDGTALKVEAFVEKPDL
CCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEECCCEECCCCCEEEEEEEECCCCC
PTAERYITENYLWNSGNFIFRADVMLSELQAFEPQIAEAAIEAVAHSKKDMNFTLLDGEA
CHHHHHHHHCEEECCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCHH
FAKAPKKSIDYAVMEKTTKAAVVPADIGWSDVGNWSSVWELSDRDEKNNSIRGNGLILDA
HHCCCHHHCCHHHHHCCCCEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCEEEEEC
SNVHVRSDGHLTTVVGVDDVIVVTTQDAVLVLDAKHGDRVKQLVDRLKEEKRTEALEHKK
CCEEEECCCCEEEEEECCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
SYRPWGYYQSVDSGARHQVKRIVVKPGQRLSLQKHFHRAEHWIVVQGTAEVTRDNEIHLV
CCCCCCCHHCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCEEEEEECCHHHCCCCEEEEE
HENESIYLPIGSVHRLVNPGRINLELIEVQTGSYLGEDDIVRLQDVYNRN
ECCCEEEEECHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1370280; 11589581 [H]