| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679520
Identifier: 182679520
GI number: 182679520
Start: 2946956
End: 2948794
Strand: Reverse
Name: 182679520
Synonym: Bind_2582
Alternate gene names: NA
Gene position: 2948794-2946956 (Counterclockwise)
Preceding gene: 182679523
Following gene: 182679515
Centisome position: 70.71
GC content: 47.42
Gene sequence:
>1839_bases ATGAACGACTTAAGAAGAAAAAAAATAGTGCTTTCATGTATTTTATTTCTGTCGACTACAATTGTCGCCGAAAAAAATGT TTTGTCCGCTGATTATTCATTGGGGGAGTTGAACCTTGCTGTGCATGGTGTGATAACGTTCGGAACGGCGATTCGCACGT CTAATCCTGACCCCAGCCTTTCAGTTACAACAACAGGTTTGCCCGGTGGTAATGATGGAGATGTGAATTTTAAAAAAGGC GCCCCTGTTTCGACGGTTTTAAAAGCCGTGGGAGCTGTTGACTTTCAATACAAAAACTATGGCATCTTTGCAAAAGCGAA GACTTGGGAGGATTTGACACTCGACAATGTTGGCGTGCCTTATGGACATTCGCCAAATGGATATGTTCCGAATGCGTTAT TAAATGATAATGGCTTTCAGAGCTTGGCCCGCTTTTCCGGAGTATCTTTCCAAGAACTATTTGCCTACGGAAAATTCGAT TTATCGGGATTGCCGCTATCGGTTCGGGCAGGTATCCAAACCATAAATTGGGGTATGCCAAGCGCCTTTGCCGGTGGCCT TTCAAACACCGTTAATGCTTTCGATGCAGCCGACTATCACCGCCCAGGTCTTTCGCCAGAAGCGGCGGTGCAACCAGCAC CATCGGCCCTCAGACCCGACTTTCTGCCGAATACTACTACAATTCCCACACCAGGACTCTTTGCCCGATTGGACGTGACA CCAGCCATGCGCTTGGAGGCCTTTTGGCAATGGGCTTTTGTGCATAATGTTATTGATCCCTGTGGTACTTTCTATTCATC GAGTAATTTTATCGCACAAGGCTGTAATGTCATTGCGTTGGGAACGGCGCCAGGACCGACGAATTATCCTAGCTCAATAT CGGCAGGTCGAACTATATATAGAGAAAATGTCCCGTCGGTTCACGATGCTGGCGCGTTCGGAATAGGTGGTATCTATCGC CTAGCACTTTCCCCCACAGAGATAGGGATTTATTTCACGCATACGGACTGGCGTACAGTAATGCCGTCGGCAGTTACCTC CTTGCGACCTTCGGGGTCTGCGCCATTCATTCCTTATAATCCAGACGGGAAAAATCCAGCTTATTTTTCTGATTACGCAA AAGGCATTGATACATTAACAGCAAATTTTAGGTCGAAGTTGAATACTGGAACCAGTTTCTTCGGTGAGACGACATTTCGT TTTAACCAACCCCTTGCGTTCAATGCTGCTGACCTACTTGCGGCAGTAACATCGAATACTTCATTGACTCCTTTGCGTTC CCTCGCGCAAACTTGGCAGCCCGGCACGTTTGTTCACGGTTATGATGAATATCGAACCTTGCAGGTGAATCTTGGAGTAC AGCAAATGTTTTCTGATGTACTCGGTGCAAATAGTTTGACGCTCACCGGTGAGGGGACAATGAAACATGTATTCGATCTG CCAAGTGTCAACGTTCGACGGTATGGCCGGCCTGATATGTTTGGGGTTGGTCCCGTAAACGGTGTTTGCCCAGCTTCGAC TACAGGGGTCGGATGCATCAATGAAGGCTATGTCACGCCAACGGCCTGGGGTGTAGCAGCTCGGGCTGCTTTTACCTATG CCAACATTTTTGGCTCTGATTTCGATGTTATTCCATCTGTGATTTATAGGTACGATTGGCGAGGCTACTCTTATGATCAG GTCTTGAACCAGGGAAGACAGGCAGCGATCGCTTCTGTTAGGCTAGATTACAAACACAAGCTCTATCTTGAGGCATCCTA TTCTCCGAGTTGGGGTGGTACATACAACGTGCTGCGTGATCGATCTGTGGCGACTGTCAGTGTTGGTTGGATTTTCTAG
Upstream 100 bases:
>100_bases GTCGCATAGGCCGAGTTTCAAAATAGGCCTGCAGACCTGTTCCTAAATGCTCGCAGTTTGCGACATCTGTCGCCAATAAT GATACCAATTGGGGGGGACA
Downstream 100 bases:
>100_bases CACTACAGTTGGATTTTGATTTGAATTTTGAATCTATGAGAGCCCTTGCTTCGAACCCTGATCAACGGTGGCGCGTCTGT CGAGACAATGTTGGAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MNDLRRKKIVLSCILFLSTTIVAEKNVLSADYSLGELNLAVHGVITFGTAIRTSNPDPSLSVTTTGLPGGNDGDVNFKKG APVSTVLKAVGAVDFQYKNYGIFAKAKTWEDLTLDNVGVPYGHSPNGYVPNALLNDNGFQSLARFSGVSFQELFAYGKFD LSGLPLSVRAGIQTINWGMPSAFAGGLSNTVNAFDAADYHRPGLSPEAAVQPAPSALRPDFLPNTTTIPTPGLFARLDVT PAMRLEAFWQWAFVHNVIDPCGTFYSSSNFIAQGCNVIALGTAPGPTNYPSSISAGRTIYRENVPSVHDAGAFGIGGIYR LALSPTEIGIYFTHTDWRTVMPSAVTSLRPSGSAPFIPYNPDGKNPAYFSDYAKGIDTLTANFRSKLNTGTSFFGETTFR FNQPLAFNAADLLAAVTSNTSLTPLRSLAQTWQPGTFVHGYDEYRTLQVNLGVQQMFSDVLGANSLTLTGEGTMKHVFDL PSVNVRRYGRPDMFGVGPVNGVCPASTTGVGCINEGYVTPTAWGVAARAAFTYANIFGSDFDVIPSVIYRYDWRGYSYDQ VLNQGRQAAIASVRLDYKHKLYLEASYSPSWGGTYNVLRDRSVATVSVGWIF
Sequences:
>Translated_612_residues MNDLRRKKIVLSCILFLSTTIVAEKNVLSADYSLGELNLAVHGVITFGTAIRTSNPDPSLSVTTTGLPGGNDGDVNFKKG APVSTVLKAVGAVDFQYKNYGIFAKAKTWEDLTLDNVGVPYGHSPNGYVPNALLNDNGFQSLARFSGVSFQELFAYGKFD LSGLPLSVRAGIQTINWGMPSAFAGGLSNTVNAFDAADYHRPGLSPEAAVQPAPSALRPDFLPNTTTIPTPGLFARLDVT PAMRLEAFWQWAFVHNVIDPCGTFYSSSNFIAQGCNVIALGTAPGPTNYPSSISAGRTIYRENVPSVHDAGAFGIGGIYR LALSPTEIGIYFTHTDWRTVMPSAVTSLRPSGSAPFIPYNPDGKNPAYFSDYAKGIDTLTANFRSKLNTGTSFFGETTFR FNQPLAFNAADLLAAVTSNTSLTPLRSLAQTWQPGTFVHGYDEYRTLQVNLGVQQMFSDVLGANSLTLTGEGTMKHVFDL PSVNVRRYGRPDMFGVGPVNGVCPASTTGVGCINEGYVTPTAWGVAARAAFTYANIFGSDFDVIPSVIYRYDWRGYSYDQ VLNQGRQAAIASVRLDYKHKLYLEASYSPSWGGTYNVLRDRSVATVSVGWIF >Mature_612_residues MNDLRRKKIVLSCILFLSTTIVAEKNVLSADYSLGELNLAVHGVITFGTAIRTSNPDPSLSVTTTGLPGGNDGDVNFKKG APVSTVLKAVGAVDFQYKNYGIFAKAKTWEDLTLDNVGVPYGHSPNGYVPNALLNDNGFQSLARFSGVSFQELFAYGKFD LSGLPLSVRAGIQTINWGMPSAFAGGLSNTVNAFDAADYHRPGLSPEAAVQPAPSALRPDFLPNTTTIPTPGLFARLDVT PAMRLEAFWQWAFVHNVIDPCGTFYSSSNFIAQGCNVIALGTAPGPTNYPSSISAGRTIYRENVPSVHDAGAFGIGGIYR LALSPTEIGIYFTHTDWRTVMPSAVTSLRPSGSAPFIPYNPDGKNPAYFSDYAKGIDTLTANFRSKLNTGTSFFGETTFR FNQPLAFNAADLLAAVTSNTSLTPLRSLAQTWQPGTFVHGYDEYRTLQVNLGVQQMFSDVLGANSLTLTGEGTMKHVFDL PSVNVRRYGRPDMFGVGPVNGVCPASTTGVGCINEGYVTPTAWGVAARAAFTYANIFGSDFDVIPSVIYRYDWRGYSYDQ VLNQGRQAAIASVRLDYKHKLYLEASYSPSWGGTYNVLRDRSVATVSVGWIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66069; Mature: 66069
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLRRKKIVLSCILFLSTTIVAEKNVLSADYSLGELNLAVHGVITFGTAIRTSNPDPSL CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEEEECEEEECCCCCCCE SVTTTGLPGGNDGDVNFKKGAPVSTVLKAVGAVDFQYKNYGIFAKAKTWEDLTLDNVGVP EEEECCCCCCCCCCEEECCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCCCEECCCCCC YGHSPNGYVPNALLNDNGFQSLARFSGVSFQELFAYGKFDLSGLPLSVRAGIQTINWGMP CCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHCCCCEEEECCCC SAFAGGLSNTVNAFDAADYHRPGLSPEAAVQPAPSALRPDFLPNTTTIPTPGLFARLDVT HHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCC PAMRLEAFWQWAFVHNVIDPCGTFYSSSNFIAQGCNVIALGTAPGPTNYPSSISAGRTIY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEH RENVPSVHDAGAFGIGGIYRLALSPTEIGIYFTHTDWRTVMPSAVTSLRPSGSAPFIPYN HCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC PDGKNPAYFSDYAKGIDTLTANFRSKLNTGTSFFGETTFRFNQPLAFNAADLLAAVTSNT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEECHHHHHHHHHCCC SLTPLRSLAQTWQPGTFVHGYDEYRTLQVNLGVQQMFSDVLGANSLTLTGEGTMKHVFDL CCHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHCC PSVNVRRYGRPDMFGVGPVNGVCPASTTGVGCINEGYVTPTAWGVAARAAFTYANIFGSD CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC FDVIPSVIYRYDWRGYSYDQVLNQGRQAAIASVRLDYKHKLYLEASYSPSWGGTYNVLRD HHHHHHHHHEECCCCCCHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCCCHHHHCC RSVATVSVGWIF CCEEEEEEEEEC >Mature Secondary Structure MNDLRRKKIVLSCILFLSTTIVAEKNVLSADYSLGELNLAVHGVITFGTAIRTSNPDPSL CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEEEECEEEECCCCCCCE SVTTTGLPGGNDGDVNFKKGAPVSTVLKAVGAVDFQYKNYGIFAKAKTWEDLTLDNVGVP EEEECCCCCCCCCCEEECCCCCHHHHHHHHCCCEEEECCCEEEEECCCCCCCEECCCCCC YGHSPNGYVPNALLNDNGFQSLARFSGVSFQELFAYGKFDLSGLPLSVRAGIQTINWGMP CCCCCCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHCCCCEEEECCCC SAFAGGLSNTVNAFDAADYHRPGLSPEAAVQPAPSALRPDFLPNTTTIPTPGLFARLDVT HHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCC PAMRLEAFWQWAFVHNVIDPCGTFYSSSNFIAQGCNVIALGTAPGPTNYPSSISAGRTIY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEH RENVPSVHDAGAFGIGGIYRLALSPTEIGIYFTHTDWRTVMPSAVTSLRPSGSAPFIPYN HCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCC PDGKNPAYFSDYAKGIDTLTANFRSKLNTGTSFFGETTFRFNQPLAFNAADLLAAVTSNT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCEECHHHHHHHHHCCC SLTPLRSLAQTWQPGTFVHGYDEYRTLQVNLGVQQMFSDVLGANSLTLTGEGTMKHVFDL CCHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHCC PSVNVRRYGRPDMFGVGPVNGVCPASTTGVGCINEGYVTPTAWGVAARAAFTYANIFGSD CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC FDVIPSVIYRYDWRGYSYDQVLNQGRQAAIASVRLDYKHKLYLEASYSPSWGGTYNVLRD HHHHHHHHHEECCCCCCHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCCCHHHHCC RSVATVSVGWIF CCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA