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The map label for this gene is ycjW [C]

Identifier: 182679442

GI number: 182679442

Start: 2844765

End: 2845766

Strand: Reverse

Name: ycjW [C]

Synonym: Bind_2492

Alternate gene names: 182679442

Gene position: 2845766-2844765 (Counterclockwise)

Preceding gene: 182679443

Following gene: 182679441

Centisome position: 68.24

GC content: 58.18

Gene sequence:

>1002_bases
ATGAGCAAGACGAACTATGGGGATATAGCGCGTCTTGCCGGAGTGGGAACCGCGACTGTTGAGCGGGTTTTGAACGGGCG
TGGGGGTGTTCGCCCCGAACTGGTCAAGAAGGTCGTTATCGCCGCGCGCACCCTTGAGTACCCGCGTATACTGCCCGATC
TCCATCGCGGTCTTCTGCGCCTGGAAGTGTTGATGGTTCGTCCCGACACAACCTTTTATCAACGTCTCTCTCGTGCCTTT
GAGCGGATCGCCGCGACCCTTGATCCATTGGTGATTGTGCACCGCAACTTCACCGAAGAGATGAAGCCGGAAAAGATTGC
ACAACGCATTATGTCAATCGATCTTCCACGTGCCGGCTTGATCCTTGCCGTGCCGAGCAATCCAGTGATCAGTGCCGCGG
TGGAAAAGGTGATGGCGCAAGGATTACCCGTGGTCCACGTCGTGACCCGTGCGTCCGATCGCGTCGGAGAATTCGTCGGC
ATTGACAACTATGCCGCCGGTCGGACGGCGGCGCTTTTTATCAGCCGGATGGCGCACCGGACCGGGCCGGTCGTCGCCAT
TTGCCATCCCATCTATCAAGTGCATCGGGATCGTATCCGCGGGTTTTCTGACTATCTCCATGAATATCCCGGTGCCTCCA
GCTTCGAATGGCTGGGATTTGGTCAAGATGAGGAGCGCATTTGCGCTGATCTGTTGTGGTCGGCACTGGAGATGTATCCC
GATCTTGCCGGTTTCTACAACGCGGGAGGCGCGAATTCAGCGCTGATCGAGGTGCTTCGCCGGCATCCGCGCGGCCGCAA
TGTATTCTTCGTTGGGCACGAACTGACCGAATATACGCGCATTGCGCTGCAAGACGGCACCATGGATGTGGTGCTGGATC
AGGCGCCAGAGGCGCAGGCCCGGCGTGCGTTTGACCTGATCCTGCGCCGTATCGGTTTGACCGAGATCGAGCCGGACCGA
ACTCCCATTCGCTTCATTACCATCACCAAGGAGGCGCTTTGA

Upstream 100 bases:

>100_bases
ATATCGGCCATGTCTTTATCCGGTCCTCGTAATCACGCTCCTGGGTTAGGCTTGGTCACCAAAAAGCTTGGCGGTGACTG
ACCTTAAAGGATGCTTGAAG

Downstream 100 bases:

>100_bases
TCTAATTAGATCAAAAATGGCTTCGGCATTCGGCAGGCCCCTTGTTATTTTCGTAACAGGGAGGAGAGCCGGAGCGTCGA
GAAAAACGACACCGAACAAA

Product: LacI family transcription regulator

Products: NA

Alternate protein names: LacI Family Transcription Regulator; Regulatory Protein LacI; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein LacI Family; LacI Family Regulatory Protein; Regulatory Protein LacI Family; LacI Regulatory Protein; Transcriptional Regulator LacI Family Protein; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulator Protein Laci-Family; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Regulatory Protein; Laci-Related Transcriptional Regulator Protein; LacI Family Regulatory; HTH-Type Transcriptional Repressor Purr; Laci-Family Transcription Regulator; Transcription Regulator

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSKTNYGDIARLAGVGTATVERVLNGRGGVRPELVKKVVIAARTLEYPRILPDLHRGLLRLEVLMVRPDTTFYQRLSRAF
ERIAATLDPLVIVHRNFTEEMKPEKIAQRIMSIDLPRAGLILAVPSNPVISAAVEKVMAQGLPVVHVVTRASDRVGEFVG
IDNYAAGRTAALFISRMAHRTGPVVAICHPIYQVHRDRIRGFSDYLHEYPGASSFEWLGFGQDEERICADLLWSALEMYP
DLAGFYNAGGANSALIEVLRRHPRGRNVFFVGHELTEYTRIALQDGTMDVVLDQAPEAQARRAFDLILRRIGLTEIEPDR
TPIRFITITKEAL

Sequences:

>Translated_333_residues
MSKTNYGDIARLAGVGTATVERVLNGRGGVRPELVKKVVIAARTLEYPRILPDLHRGLLRLEVLMVRPDTTFYQRLSRAF
ERIAATLDPLVIVHRNFTEEMKPEKIAQRIMSIDLPRAGLILAVPSNPVISAAVEKVMAQGLPVVHVVTRASDRVGEFVG
IDNYAAGRTAALFISRMAHRTGPVVAICHPIYQVHRDRIRGFSDYLHEYPGASSFEWLGFGQDEERICADLLWSALEMYP
DLAGFYNAGGANSALIEVLRRHPRGRNVFFVGHELTEYTRIALQDGTMDVVLDQAPEAQARRAFDLILRRIGLTEIEPDR
TPIRFITITKEAL
>Mature_332_residues
SKTNYGDIARLAGVGTATVERVLNGRGGVRPELVKKVVIAARTLEYPRILPDLHRGLLRLEVLMVRPDTTFYQRLSRAFE
RIAATLDPLVIVHRNFTEEMKPEKIAQRIMSIDLPRAGLILAVPSNPVISAAVEKVMAQGLPVVHVVTRASDRVGEFVGI
DNYAAGRTAALFISRMAHRTGPVVAICHPIYQVHRDRIRGFSDYLHEYPGASSFEWLGFGQDEERICADLLWSALEMYPD
LAGFYNAGGANSALIEVLRRHPRGRNVFFVGHELTEYTRIALQDGTMDVVLDQAPEAQARRAFDLILRRIGLTEIEPDRT
PIRFITITKEAL

Specific function: Unknown

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37249; Mature: 37117

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTNYGDIARLAGVGTATVERVLNGRGGVRPELVKKVVIAARTLEYPRILPDLHRGLLR
CCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEVLMVRPDTTFYQRLSRAFERIAATLDPLVIVHRNFTEEMKPEKIAQRIMSIDLPRAGL
HEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHHHHHHHHCCCCCCCE
ILAVPSNPVISAAVEKVMAQGLPVVHVVTRASDRVGEFVGIDNYAAGRTAALFISRMAHR
EEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TGPVVAICHPIYQVHRDRIRGFSDYLHEYPGASSFEWLGFGQDEERICADLLWSALEMYP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCH
DLAGFYNAGGANSALIEVLRRHPRGRNVFFVGHELTEYTRIALQDGTMDVVLDQAPEAQA
HHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHEEECCCEEEEECCCCCHHH
RRAFDLILRRIGLTEIEPDRTPIRFITITKEAL
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
SKTNYGDIARLAGVGTATVERVLNGRGGVRPELVKKVVIAARTLEYPRILPDLHRGLLR
CCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEVLMVRPDTTFYQRLSRAFERIAATLDPLVIVHRNFTEEMKPEKIAQRIMSIDLPRAGL
HEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHHHHHHHHCCCCCCCE
ILAVPSNPVISAAVEKVMAQGLPVVHVVTRASDRVGEFVGIDNYAAGRTAALFISRMAHR
EEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TGPVVAICHPIYQVHRDRIRGFSDYLHEYPGASSFEWLGFGQDEERICADLLWSALEMYP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCH
DLAGFYNAGGANSALIEVLRRHPRGRNVFFVGHELTEYTRIALQDGTMDVVLDQAPEAQA
HHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHEEECCCEEEEECCCCCHHH
RRAFDLILRRIGLTEIEPDRTPIRFITITKEAL
HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA