| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is 182679437
Identifier: 182679437
GI number: 182679437
Start: 2840040
End: 2840897
Strand: Reverse
Name: 182679437
Synonym: Bind_2487
Alternate gene names: NA
Gene position: 2840897-2840040 (Counterclockwise)
Preceding gene: 182679438
Following gene: 182679432
Centisome position: 68.12
GC content: 56.18
Gene sequence:
>858_bases ATGATGCAGAAACTGCTAATCTTCCAGTCGCTCTGGGCCATGGAACGCCGGCATACGGATGGCCAGGAGCGCAGCCTCGA CGAGAACATCGCAATGATTTCGGCGGCTGAATTCGATGGTGTCAGTGCACACTATACAAACCGCCGAGATGTCCAACGTC TGAACGAAGCCATCCGGGGCACAGGATTGAAGATAGAAGGAGTCTGCTTTCCCAGTTGCGTCGAGGATTTACGCCTGCCA CTGGAGCTTGCTGCGGAATTTCCGGTCAGCCACATCGACCTGCAACCCGATATCCGCCTGCGCCGGGTCGAGGACTGTCT GCCGCTTCTCGATGGATGGATGCGGCTCGCCGAAGACGCAGGCGTCCCCGTATTCATCGAAACTCATCGCGACAGGATGA TGACAGATCTGTTTTTCACGCTGGACCTGCTGGATCAGCGGCCCGAACTGCCATTGCTTGCCGACCTATCGCATTTTCTG GTCGGCCGCGAATTTGCTTTTCCGGTCGACGAGGAAAATCACGCCATGATCCAGCGTATAATGCGCAATGCGTGGTCCTT TCATGGCAGGGTCGCATCGCGGGAACAGGTTCAGATCGAAATCTCGTTTCCACACCATCGACCTTGGTTGGAATTGTTCC TCGAATGGTGGGGCTACGGCATGCGTGACTGGCGTTATCGCGCTGCATCGGACGCCGAGCTGGTGTTTACTTGCGAACTG GGACCGAAGCCTTACGCGATCACAGGGCCTGACGGCAATGATATGACCGATAGATGGGTGGAGGCGCTGTCGCTTCGCCA AATGCTTCGCGAACTTTGGCATGCGAACACATCCAACCACCTCAACATACCGGGTTGA
Upstream 100 bases:
>100_bases TGGCTGAGATGTTGATTGCCGCAGGGGCCAGCCCTGACCCTGTGGCATTGGCCGACCCCGGGACGAACCTTAAGACGTTT TTGAAAAACGCGCGGGCCGC
Downstream 100 bases:
>100_bases ATTGGGTGCCAGACAACAGTGCAAACATGGTGACGAGGATAAAGATCATCGCCACCGTTGCCAGCATGTCGACAAACATT GCTATATTACTGACTGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MMQKLLIFQSLWAMERRHTDGQERSLDENIAMISAAEFDGVSAHYTNRRDVQRLNEAIRGTGLKIEGVCFPSCVEDLRLP LELAAEFPVSHIDLQPDIRLRRVEDCLPLLDGWMRLAEDAGVPVFIETHRDRMMTDLFFTLDLLDQRPELPLLADLSHFL VGREFAFPVDEENHAMIQRIMRNAWSFHGRVASREQVQIEISFPHHRPWLELFLEWWGYGMRDWRYRAASDAELVFTCEL GPKPYAITGPDGNDMTDRWVEALSLRQMLRELWHANTSNHLNIPG
Sequences:
>Translated_285_residues MMQKLLIFQSLWAMERRHTDGQERSLDENIAMISAAEFDGVSAHYTNRRDVQRLNEAIRGTGLKIEGVCFPSCVEDLRLP LELAAEFPVSHIDLQPDIRLRRVEDCLPLLDGWMRLAEDAGVPVFIETHRDRMMTDLFFTLDLLDQRPELPLLADLSHFL VGREFAFPVDEENHAMIQRIMRNAWSFHGRVASREQVQIEISFPHHRPWLELFLEWWGYGMRDWRYRAASDAELVFTCEL GPKPYAITGPDGNDMTDRWVEALSLRQMLRELWHANTSNHLNIPG >Mature_285_residues MMQKLLIFQSLWAMERRHTDGQERSLDENIAMISAAEFDGVSAHYTNRRDVQRLNEAIRGTGLKIEGVCFPSCVEDLRLP LELAAEFPVSHIDLQPDIRLRRVEDCLPLLDGWMRLAEDAGVPVFIETHRDRMMTDLFFTLDLLDQRPELPLLADLSHFL VGREFAFPVDEENHAMIQRIMRNAWSFHGRVASREQVQIEISFPHHRPWLELFLEWWGYGMRDWRYRAASDAELVFTCEL GPKPYAITGPDGNDMTDRWVEALSLRQMLRELWHANTSNHLNIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33209; Mature: 33209
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQKLLIFQSLWAMERRHTDGQERSLDENIAMISAAEFDGVSAHYTNRRDVQRLNEAIRG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHC TGLKIEGVCFPSCVEDLRLPLELAAEFPVSHIDLQPDIRLRRVEDCLPLLDGWMRLAEDA CCCEEECEECHHHHHHHCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GVPVFIETHRDRMMTDLFFTLDLLDQRPELPLLADLSHFLVGREFAFPVDEENHAMIQRI CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRNAWSFHGRVASREQVQIEISFPHHRPWLELFLEWWGYGMRDWRYRAASDAELVFTCEL HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHEECCCCCCEEEEEEEC GPKPYAITGPDGNDMTDRWVEALSLRQMLRELWHANTSNHLNIPG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure MMQKLLIFQSLWAMERRHTDGQERSLDENIAMISAAEFDGVSAHYTNRRDVQRLNEAIRG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHC TGLKIEGVCFPSCVEDLRLPLELAAEFPVSHIDLQPDIRLRRVEDCLPLLDGWMRLAEDA CCCEEECEECHHHHHHHCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHC GVPVFIETHRDRMMTDLFFTLDLLDQRPELPLLADLSHFLVGREFAFPVDEENHAMIQRI CCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH MRNAWSFHGRVASREQVQIEISFPHHRPWLELFLEWWGYGMRDWRYRAASDAELVFTCEL HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHEECCCCCCEEEEEEEC GPKPYAITGPDGNDMTDRWVEALSLRQMLRELWHANTSNHLNIPG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA