Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is yadT [C]

Identifier: 182679286

GI number: 182679286

Start: 2667520

End: 2668638

Strand: Reverse

Name: yadT [C]

Synonym: Bind_2330

Alternate gene names: 182679286

Gene position: 2668638-2667520 (Counterclockwise)

Preceding gene: 182679288

Following gene: 182679285

Centisome position: 63.99

GC content: 56.57

Gene sequence:

>1119_bases
ATGGCTGGGCAGAAGGACAGGCTGTTTCTCGCCATGACCAACTTTTCTTTGCCGATTCAAGGCCATTTTTTTCAAGGTAT
TTTTTTTCGCAGATCCTTTCGCTGGATCTGGCTCGCGCTCTTTTGCCTCTTCCTCAGCACCGCGACGGGCGAGGCCTTTG
CACGCGACATCAAGGACATGACGGGTCGCACCGTCTCTGTGCCGGAGCAGCCGGCCCGCATCTTTTCACTTTCCTACCCC
TTGACCGTGCTGCTTTACGCGCTCGCGCCAGATCTGCTGGTCGCCTCCAATTTCCCCATCGCCGAGCCAGCGAAACCATT
CCTGCCGCAGCAAGTGACGGCCTTGCCGGCGATCGGCGCGATGATGGGCATGGGGCCCGGCCATACAATGAATCCTGAAG
AAATCATGGCCCTGCATCCAGATCTGTTGCTCGCTTGGGTCGACCCCATGGGGGATACGGAGAAGGTCGTGCATCCTGTC
GCGGGGTCTGGCCTGCCGATCGTCTATGTCAAGCTCACCAATCTCGGCGATTATCCGTCAGCCTTGCGTTTTCTCGGTCG
TTTGCTTGGCCGCACGAAGCGGGCGGAAGCGTTAGCAACCTATATTGAATTCGCTCAGATACAGGTTTCGGCGGCGGTCG
AGAGCGTTCCCTACAAGGAGCGGGTGAAAGTCTTTTACGCGGAAGGGCATGATGGTCTTTCGACCGAATGCGATGCGTCC
TTTCATGCTGAATCAATCAATTTCGCCGGCGGCAGGAATGTGCGGCACTGCCGGCAGACGACATTGATGGGCATGGAAAC
GGTGACACTCGAACAGATCATCGCGGATCAGCCTGAAATCATCGTTGCCCAGGACCCGGGTTTTGCAAAGACCGTCGCAA
GTGATCCCGCCTGGAAACAGGTGAAAGGGAGCCAGCATGTCCTGAGCGTGCCTCATCTGCCATTCAACTGGCTCGATCGA
CCGCCGAGCTTCATGCGTGCGCTCGCCATCCGTTGGCTTGCCGCCAATTTCTATCCTGACCGCTTTTCTTTCGATCTTCG
CGCCGAGCTGAAAACCTTCCATAGCTTATTCTTCGGCGTCAGCCTCAGCGATAAAGATGTCGACACTATCCTACACTGA

Upstream 100 bases:

>100_bases
ACGATGGCTTCTTCTACAGGAAAGCCAGCCGTATTTATACTGTATTTGAAACGATACAGATAATGGTATAAGAACCAGTC
GCCTTTTCAACTTGAAGGGG

Downstream 100 bases:

>100_bases
TGTTCCGGCGCGCCGGGAGAGGACCTGGCACGCGCCCCTGCTCGTGATTTTGCTCGGCCTCACGATCGCCATAGCGCTCA
CCATCGGCCGCTATCCCTTG

Product: periplasmic binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Membrane Component Of ABC-Transporter; Copper Amine Oxidase Domain Protein; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYP
LTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPV
AGSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS
FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDR
PPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH

Sequences:

>Translated_372_residues
MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYP
LTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPV
AGSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS
FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDR
PPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH
>Mature_371_residues
AGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDMTGRTVSVPEQPARIFSLSYPL
TVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGAMMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVA
GSGLPIVYVKLTNLGDYPSALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDASF
HAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQVKGSQHVLSVPHLPFNWLDRP
PSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGVSLSDKDVDTILH

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41387; Mature: 41256

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDM
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TGRTVSVPEQPARIFSLSYPLTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGA
CCCEECCCCCCCCEEEECCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH
MMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVAGSGLPIVYVKLTNLGDYPS
HHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHH
ALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCC
FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQ
CCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCHHH
VKGSQHVLSVPHLPFNWLDRPPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGV
HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
SLSDKDVDTILH
CCCCCCHHHHCC
>Mature Secondary Structure 
AGQKDRLFLAMTNFSLPIQGHFFQGIFFRRSFRWIWLALFCLFLSTATGEAFARDIKDM
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TGRTVSVPEQPARIFSLSYPLTVLLYALAPDLLVASNFPIAEPAKPFLPQQVTALPAIGA
CCCEECCCCCCCCEEEECCHHHHHHHHHCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHH
MMGMGPGHTMNPEEIMALHPDLLLAWVDPMGDTEKVVHPVAGSGLPIVYVKLTNLGDYPS
HHCCCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCCHH
ALRFLGRLLGRTKRAEALATYIEFAQIQVSAAVESVPYKERVKVFYAEGHDGLSTECDAS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCC
FHAESINFAGGRNVRHCRQTTLMGMETVTLEQIIADQPEIIVAQDPGFAKTVASDPAWKQ
CCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCHHH
VKGSQHVLSVPHLPFNWLDRPPSFMRALAIRWLAANFYPDRFSFDLRAELKTFHSLFFGV
HCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
SLSDKDVDTILH
CCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA