| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ttuD [H]
Identifier: 182679171
GI number: 182679171
Start: 2532914
End: 2534248
Strand: Reverse
Name: ttuD [H]
Synonym: Bind_2209
Alternate gene names: 182679171
Gene position: 2534248-2532914 (Counterclockwise)
Preceding gene: 182679172
Following gene: 182679170
Centisome position: 60.77
GC content: 62.85
Gene sequence:
>1335_bases ATGAGCACTAGACAGCAATCCATCCCATCTTCTGTCCTGGCAGGGCAGAGGAAATGGTCAGATGAAGAGGCGCGTGGATT CGTGCGCCGTCTCTTTGATGCCGCCGTCGCTTCGGCCGATCCGCTGCATGTTCTGGCAGCGCATTTGCCCGATCCACCCC GCTTGGGGCGCTGTGTCGTGGTTGGCGCGGGCAAATCGGCTGCCACAATGGCTGCCGCTTTGGAACGGGCTTGGCCCGAC GTGGACCTTTCGGGCCTCGTCGTGACCCGTTACGGCCATGCGGTCCCCACCCAGCGGATCGAAGTGATCGAAGCTGCCCA TCCCGTCCCCGATGACCGCAGTGAACATGCCGCGCGACGCATGCTCGCCGCCGTTTCCGGCCTGAAAGAAGGCGATCTAG TGATCGCGCTGATCTCCGGCGGAGGCTCGTCGTTGCTGGCTCTTCCCCGGCCGGGCTTGAGCCTTGCCGATAAGCAGGCC GTCAACCGTGCTTTGCTGCATAGCGGTGCGACCATCGCGGAAATGAATCTCATCCGCAAGCAATTGTCGGCGATCAAGGG CGGTAGGCTCGCCGCTGCCGCCGCGCCGGCGCGCGTTATGACGCTCGCCATCAGTGACGTGCCAGGGGACGATCCGGCAA CTATTGCCAGCGGGCCGACCGTGCCCGAACGCTTTGACGCCGAGGCTATTGGCGAAATTTTGGCGCGCTACAAGCTGGAT CTGCCACCGCATGTGATGAAGGCATTGAGTGATGGGCCTGCCGGACGACCGGCGCTTAACGATCTGCCACCCGTCGATTT CAGGATGATCGCCACTCCGGCCATGGCGCTTGCGGCTTGCGCGGCCACGGCGCGGGCTCATGGCGTGACGCCGATCATTC TTGGCGATGCGCTGGAAGGTGAAAGCCGCGAGGTCGGGACGGTCATGGCCGGGATTGCCCGCAGTGTGAGGGATTATGGT CAGCCGGTTGAGGCTCCCGCCGTGCTTTTGTCAGGCGGTGAGACGACGGTTTCGATCGGTATGACCCCTCCTGGCCGTGG GGGACGCAACACGGAATTCCTGGCGGGGCTCGCGGTCGCTTTGGCTGGTGCGCGCGGCATTTGGGCCATTGCGGGGGATA CGGATGGCATTGATGGGACGGAAGATGCGGCGGGCGCTATCGTTGCGCCCGATACATTGATCCGCGCCGAGGCGAAGGGG TTGAATGCGCGCGACTATCTCTCGCGCCATGATAGCTATTCATTGTTTCAGGCCCTCGGGGATCTGGTCGTGACGGGTCC GACCTTGACCAATGTCAACGATATCCGTGCCATCTTAATCATGCCGAAGGGATAA
Upstream 100 bases:
>100_bases TGCCGAGCCGAGGGCTTGTCGCGTCTTCGGCCACCGAAAACGCGACGACGGGGCAGGCCAATTCGCCCAGGATCAGCACC ATGCGGGATGTGGCCGGCCA
Downstream 100 bases:
>100_bases TCGGCGATGGCCATTCTTGATTCCCGCGTGGATGAGGCTAGATCAATTCCGTGCGAGCAGCATCGGCCGTCTCGTCATTT CAAACAACGGCAGGAAACAG
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSTRQQSIPSSVLAGQRKWSDEEARGFVRRLFDAAVASADPLHVLAAHLPDPPRLGRCVVVGAGKSAATMAAALERAWPD VDLSGLVVTRYGHAVPTQRIEVIEAAHPVPDDRSEHAARRMLAAVSGLKEGDLVIALISGGGSSLLALPRPGLSLADKQA VNRALLHSGATIAEMNLIRKQLSAIKGGRLAAAAAPARVMTLAISDVPGDDPATIASGPTVPERFDAEAIGEILARYKLD LPPHVMKALSDGPAGRPALNDLPPVDFRMIATPAMALAACAATARAHGVTPIILGDALEGESREVGTVMAGIARSVRDYG QPVEAPAVLLSGGETTVSIGMTPPGRGGRNTEFLAGLAVALAGARGIWAIAGDTDGIDGTEDAAGAIVAPDTLIRAEAKG LNARDYLSRHDSYSLFQALGDLVVTGPTLTNVNDIRAILIMPKG
Sequences:
>Translated_444_residues MSTRQQSIPSSVLAGQRKWSDEEARGFVRRLFDAAVASADPLHVLAAHLPDPPRLGRCVVVGAGKSAATMAAALERAWPD VDLSGLVVTRYGHAVPTQRIEVIEAAHPVPDDRSEHAARRMLAAVSGLKEGDLVIALISGGGSSLLALPRPGLSLADKQA VNRALLHSGATIAEMNLIRKQLSAIKGGRLAAAAAPARVMTLAISDVPGDDPATIASGPTVPERFDAEAIGEILARYKLD LPPHVMKALSDGPAGRPALNDLPPVDFRMIATPAMALAACAATARAHGVTPIILGDALEGESREVGTVMAGIARSVRDYG QPVEAPAVLLSGGETTVSIGMTPPGRGGRNTEFLAGLAVALAGARGIWAIAGDTDGIDGTEDAAGAIVAPDTLIRAEAKG LNARDYLSRHDSYSLFQALGDLVVTGPTLTNVNDIRAILIMPKG >Mature_443_residues STRQQSIPSSVLAGQRKWSDEEARGFVRRLFDAAVASADPLHVLAAHLPDPPRLGRCVVVGAGKSAATMAAALERAWPDV DLSGLVVTRYGHAVPTQRIEVIEAAHPVPDDRSEHAARRMLAAVSGLKEGDLVIALISGGGSSLLALPRPGLSLADKQAV NRALLHSGATIAEMNLIRKQLSAIKGGRLAAAAAPARVMTLAISDVPGDDPATIASGPTVPERFDAEAIGEILARYKLDL PPHVMKALSDGPAGRPALNDLPPVDFRMIATPAMALAACAATARAHGVTPIILGDALEGESREVGTVMAGIARSVRDYGQ PVEAPAVLLSGGETTVSIGMTPPGRGGRNTEFLAGLAVALAGARGIWAIAGDTDGIDGTEDAAGAIVAPDTLIRAEAKGL NARDYLSRHDSYSLFQALGDLVVTGPTLTNVNDIRAILIMPKG
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=443, Percent_Identity=33.8600451467269, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI193205461, Length=353, Percent_Identity=34.2776203966006, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI19920578, Length=439, Percent_Identity=27.7904328018223, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 45856; Mature: 45725
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRQQSIPSSVLAGQRKWSDEEARGFVRRLFDAAVASADPLHVLAAHLPDPPRLGRCVV CCCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEE VGAGKSAATMAAALERAWPDVDLSGLVVTRYGHAVPTQRIEVIEAAHPVPDDRSEHAARR EECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHH MLAAVSGLKEGDLVIALISGGGSSLLALPRPGLSLADKQAVNRALLHSGATIAEMNLIRK HHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QLSAIKGGRLAAAAAPARVMTLAISDVPGDDPATIASGPTVPERFDAEAIGEILARYKLD HHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC LPPHVMKALSDGPAGRPALNDLPPVDFRMIATPAMALAACAATARAHGVTPIILGDALEG CCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ESREVGTVMAGIARSVRDYGQPVEAPAVLLSGGETTVSIGMTPPGRGGRNTEFLAGLAVA CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHH LAGARGIWAIAGDTDGIDGTEDAAGAIVAPDTLIRAEAKGLNARDYLSRHDSYSLFQALG HHCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHH DLVVTGPTLTNVNDIRAILIMPKG HHEECCCCCCCCCCCEEEEEEECC >Mature Secondary Structure STRQQSIPSSVLAGQRKWSDEEARGFVRRLFDAAVASADPLHVLAAHLPDPPRLGRCVV CCCHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEE VGAGKSAATMAAALERAWPDVDLSGLVVTRYGHAVPTQRIEVIEAAHPVPDDRSEHAARR EECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHH MLAAVSGLKEGDLVIALISGGGSSLLALPRPGLSLADKQAVNRALLHSGATIAEMNLIRK HHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH QLSAIKGGRLAAAAAPARVMTLAISDVPGDDPATIASGPTVPERFDAEAIGEILARYKLD HHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC LPPHVMKALSDGPAGRPALNDLPPVDFRMIATPAMALAACAATARAHGVTPIILGDALEG CCHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ESREVGTVMAGIARSVRDYGQPVEAPAVLLSGGETTVSIGMTPPGRGGRNTEFLAGLAVA CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHH LAGARGIWAIAGDTDGIDGTEDAAGAIVAPDTLIRAEAKGLNARDYLSRHDSYSLFQALG HHCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHH DLVVTGPTLTNVNDIRAILIMPKG HHEECCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]