| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is phbC [H]
Identifier: 182679159
GI number: 182679159
Start: 2511776
End: 2512903
Strand: Direct
Name: phbC [H]
Synonym: Bind_2197
Alternate gene names: 182679159
Gene position: 2511776-2512903 (Clockwise)
Preceding gene: 182679158
Following gene: 182679163
Centisome position: 60.23
GC content: 54.34
Gene sequence:
>1128_bases ATGGAACAGACTCTTTCCGCTCCGCAGAAACCCGAATCCTATCTCGACCTGCCCTTCTTCTGGCCGTTCAAGAACGTGAC CAACATGACCGAGGAAGGTCTCACCCTCCTCAAGAAGAATCTTGAGTTTTTGGCCGAGGAACAAAAGTTCAAACACGGCC TGGAGCCGCATCTTGCAACCCCGAATACGATCAAGCTTGATCTGCGCACCGTGCGCTTTCGCGATTATTCGAAGCCTGAC GCCACGGGCATACCCACGATCGTCGACGCTCCCTTCGCTGGTCATTCGGCCATGATTGCCGATTATCACAAAGGCCAGAG CTTGATGGAAACCTTGGCCGCCAATGGCATCGACAATCTCTATCTGTTCGACTGGAAATCAGCGACGCTTGATATGAAGG ATCTCGAGATCGATCAATATCTCGCCGAGATCAATGTCTGCGTCGACGATGTCGGCGGAAGGGTCAATCTCATTGGTCTA TGCCAGGGCGGCTGGATGTCCGCCATGTATGCGGCGCGTTTTCCCCACAAGGTCGCAAGCCTGGTCCTCGCCGGCTCACC AATCGATACGGACGCCGGCAATGGGCCGATCAAGCAGATGGCGCACACCTATCCGCTTTCCTTCTATCAGGAGCTGGTGC AAATGGGCGAGGGGCTCATGCGTGGTAAATTCATGCTGGCCGGCTGGAAGAACATGCATCCGGAAGCTCATTATTTCCAG AACTATATCGATCTTTACGAACATATCGACGATCCGAATTACATCTCCAAGGAAGAAACCTTCGCGAGCTGGTACGAGCA TCCGATCGACCTGCCCGGACGCTGGTATCTTCAAGCCATCACGCAGCTCTTCAAGGAAAATCGCTTCGCCAAAGGCACGT TTGTCGCGCTGGGCGAGACCCTGAACCTGAAAAACGTCACCTGCCCGGTCTATCTGCTCGCCGGTGAAACGGACGATATC ACCACCAAGGAACAGGTGTTTGATGCCGACAAATATCTCGGCACACCGAAGGACCAGATTCAGAAACAGCTCGTTCCAGG CGGCCATATCGGCCTGTTCATGGGAACGCATACATTGAAGCAAGCCTGGCCCGGCATTGCCGCCTGGATCCGGACGAATG GGAAGTAA
Upstream 100 bases:
>100_bases CTCTGACTGCCGTGGTCATGGCGGCGATCACCTTCACATTATTGACGCTTGCCGCTTTCAGTGTCCGCCGCGTTCTCATC ACTTGAATTCCAGAGGTCCT
Downstream 100 bases:
>100_bases ATATCTCACCCAGTCGTGATAACAAAGCTACGGGTTCGGCTTGCCGGCTCGTTTCAGTCTTTACGAAAAGAGACTGATAC CAAGGGTCGCGGAGAGTGAC
Product: PHB de-polymerase domain-containing protein
Products: NA
Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK
Sequences:
>Translated_375_residues MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK >Mature_375_residues MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLATPNTIKLDLRTVRFRDYSKPD ATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNLYLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGL CQGGWMSAMYAARFPHKVASLVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGETLNLKNVTCPVYLLAGETDDI TTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLKQAWPGIAAWIRTNGK
Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]
COG id: COG3243
COG function: function code I; Poly(3-hydroxyalkanoate) synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PHA/PHB synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR010125 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 42321; Mature: 42321
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLAT CCCCCCCCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PNTIKLDLRTVRFRDYSKPDATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNL CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEHHHHCCHHHHHHHHHCCCCCE YLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGLCQGGWMSAMYAARFPHKVAS EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCHHHHHH LVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCHHHHHH NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGET HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCE LNLKNVTCPVYLLAGETDDITTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLK ECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECHHHHH QAWPGIAAWIRTNGK HHCCCCEEHEECCCC >Mature Secondary Structure MEQTLSAPQKPESYLDLPFFWPFKNVTNMTEEGLTLLKKNLEFLAEEQKFKHGLEPHLAT CCCCCCCCCCCHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PNTIKLDLRTVRFRDYSKPDATGIPTIVDAPFAGHSAMIADYHKGQSLMETLAANGIDNL CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEHHHHCCHHHHHHHHHCCCCCE YLFDWKSATLDMKDLEIDQYLAEINVCVDDVGGRVNLIGLCQGGWMSAMYAARFPHKVAS EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHCHHHHHH LVLAGSPIDTDAGNGPIKQMAHTYPLSFYQELVQMGEGLMRGKFMLAGWKNMHPEAHYFQ HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCHHHHHH NYIDLYEHIDDPNYISKEETFASWYEHPIDLPGRWYLQAITQLFKENRFAKGTFVALGET HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCE LNLKNVTCPVYLLAGETDDITTKEQVFDADKYLGTPKDQIQKQLVPGGHIGLFMGTHTLK ECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECHHHHH QAWPGIAAWIRTNGK HHCCCCEEHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1396692 [H]