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The map label for this gene is 182679063

Identifier: 182679063

GI number: 182679063

Start: 2399849

End: 2400964

Strand: Reverse

Name: 182679063

Synonym: Bind_2099

Alternate gene names: NA

Gene position: 2400964-2399849 (Counterclockwise)

Preceding gene: 182679066

Following gene: 182679062

Centisome position: 57.57

GC content: 53.94

Gene sequence:

>1116_bases
TTGGGAATAGCGGGAAATTTCTGCCTATCGGTCGATAGAAACCAAACGGATCCGAGGGCTCGGCGTGCCTTTGGCATTGA
ATCCGTGGTCATTGACGGGTGGCAGGCCAAAATCTCCGAGCGTGTGCTGTGCCATTGGCCTTACGCTGATCTCCGCGTCT
TTTCTCACATTGATCCACGCCGGGATCAAAATCTGGGGCCGATTTTAGTGATTGCACCGCTCGCCGGTGCCTTTCCTGTT
TTGTTGCGTGATCTTGTGATTTCCCTCTTGCGGGAAACAGAACAGGTGGCGGTCGCCGATTGGTTCGATGTTCGCTATTT
GCCGCTCAGCCGAGGTCGTTTCGGCTTCGACGAAAACATTTCTTCCATTGTCGATATGATCCGGTTGCTCGGACCGGATG
TGAATGTCATCGGTGTTTGCCAGGGTGTAGTCTCGGCACTCGCGGCGACAGCTTATCTGTCGGCGCGTGAACCGTATTCG
GCACCGCGTTCCGCCGTTTTGATCGGCGGTCCCGTCGATCCCCTGGCCAATCCTACGGCCGTGGTGCAGCGTCTGCGCTC
GCATTCCCTGGAATGGTTGCGCAAGAACGCGATTGTGCGCGTGCCCGAGGGAGTCCCTGGCGAGGGCCGGCTTGTCTATC
CCAAGATGACGCAGCTAGCCACTTTCACCAGTTATCTCATGCGCCATTGTCTGGAAGGAAAGGAGCTCTATTGGAAGCTT
TTTGCAGATGATGGCGAAGACCCCCTGCATTTTCCGTTTTTGTCACTTGCGACCCAACTCATGGATCTTCCTGCGGAACA
TTTTTTGGAAAACATCCGCTGCATTTTTCATGATCGTGATCTTGTTTCAGGAACTTTTTTCTTCGCCAATACCAGGATCG
ATCTTCAGGCGATCAAGAACACGGCGTTGATGACGATGGAAGGCGAGCGCGACGATATTGCCGCACCGGGTCAGACACAA
GCGGCGCAAGAACTCTGCCGATCGATCCCCAGCGCAAAACGTCGTCATATACTGATCGAAGGTTGCGGTCATTTTTCACT
GTTTCACGGTCACATTTGCCGCACGCGGGTCGTACCGGAAATCATGGGATTTCTTCATCATGAAGCACGAACTTGA

Upstream 100 bases:

>100_bases
CGGCTCGTCATCACGGCATATGTGACTCTCTTATTTCGCCAGCGCGCCTTCAACTAACGGCCCTTGAGAACGTTCTCCTT
AAAAATAGGAGGAATTCGCA

Downstream 100 bases:

>100_bases
TCTCACCCGACTGGCGAGCGCCAAGGAAGTAGAGCCTTTCGAGCAGGCAGCAGCCGCCATCGACCAGGCTTTTCACGGAA
TGGTTGCACGTTACACCAAT

Product: polyhydroxyalkanoate depolymerase, intracellular

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MGIAGNFCLSVDRNQTDPRARRAFGIESVVIDGWQAKISERVLCHWPYADLRVFSHIDPRRDQNLGPILVIAPLAGAFPV
LLRDLVISLLRETEQVAVADWFDVRYLPLSRGRFGFDENISSIVDMIRLLGPDVNVIGVCQGVVSALAATAYLSAREPYS
APRSAVLIGGPVDPLANPTAVVQRLRSHSLEWLRKNAIVRVPEGVPGEGRLVYPKMTQLATFTSYLMRHCLEGKELYWKL
FADDGEDPLHFPFLSLATQLMDLPAEHFLENIRCIFHDRDLVSGTFFFANTRIDLQAIKNTALMTMEGERDDIAAPGQTQ
AAQELCRSIPSAKRRHILIEGCGHFSLFHGHICRTRVVPEIMGFLHHEART

Sequences:

>Translated_371_residues
MGIAGNFCLSVDRNQTDPRARRAFGIESVVIDGWQAKISERVLCHWPYADLRVFSHIDPRRDQNLGPILVIAPLAGAFPV
LLRDLVISLLRETEQVAVADWFDVRYLPLSRGRFGFDENISSIVDMIRLLGPDVNVIGVCQGVVSALAATAYLSAREPYS
APRSAVLIGGPVDPLANPTAVVQRLRSHSLEWLRKNAIVRVPEGVPGEGRLVYPKMTQLATFTSYLMRHCLEGKELYWKL
FADDGEDPLHFPFLSLATQLMDLPAEHFLENIRCIFHDRDLVSGTFFFANTRIDLQAIKNTALMTMEGERDDIAAPGQTQ
AAQELCRSIPSAKRRHILIEGCGHFSLFHGHICRTRVVPEIMGFLHHEART
>Mature_370_residues
GIAGNFCLSVDRNQTDPRARRAFGIESVVIDGWQAKISERVLCHWPYADLRVFSHIDPRRDQNLGPILVIAPLAGAFPVL
LRDLVISLLRETEQVAVADWFDVRYLPLSRGRFGFDENISSIVDMIRLLGPDVNVIGVCQGVVSALAATAYLSAREPYSA
PRSAVLIGGPVDPLANPTAVVQRLRSHSLEWLRKNAIVRVPEGVPGEGRLVYPKMTQLATFTSYLMRHCLEGKELYWKLF
ADDGEDPLHFPFLSLATQLMDLPAEHFLENIRCIFHDRDLVSGTFFFANTRIDLQAIKNTALMTMEGERDDIAAPGQTQA
AQELCRSIPSAKRRHILIEGCGHFSLFHGHICRTRVVPEIMGFLHHEART

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41531; Mature: 41400

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAGNFCLSVDRNQTDPRARRAFGIESVVIDGWQAKISERVLCHWPYADLRVFSHIDPR
CCCCCCEEEEECCCCCCHHHHHHHCCHHEEECCHHHHHCCCEEEECCHHHHHHHHCCCCC
RDQNLGPILVIAPLAGAFPVLLRDLVISLLRETEQVAVADWFDVRYLPLSRGRFGFDENI
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCCCCH
SSIVDMIRLLGPDVNVIGVCQGVVSALAATAYLSAREPYSAPRSAVLIGGPVDPLANPTA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHH
VVQRLRSHSLEWLRKNAIVRVPEGVPGEGRLVYPKMTQLATFTSYLMRHCLEGKELYWKL
HHHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE
FADDGEDPLHFPFLSLATQLMDLPAEHFLENIRCIFHDRDLVSGTFFFANTRIDLQAIKN
ECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEECCCHHCEEEEEEECEEEHHHHCC
TALMTMEGERDDIAAPGQTQAAQELCRSIPSAKRRHILIEGCGHFSLFHGHICRTRVVPE
CEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHH
IMGFLHHEART
HHHHHHHHCCC
>Mature Secondary Structure 
GIAGNFCLSVDRNQTDPRARRAFGIESVVIDGWQAKISERVLCHWPYADLRVFSHIDPR
CCCCCEEEEECCCCCCHHHHHHHCCHHEEECCHHHHHCCCEEEECCHHHHHHHHCCCCC
RDQNLGPILVIAPLAGAFPVLLRDLVISLLRETEQVAVADWFDVRYLPLSRGRFGFDENI
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCCCCH
SSIVDMIRLLGPDVNVIGVCQGVVSALAATAYLSAREPYSAPRSAVLIGGPVDPLANPTA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHH
VVQRLRSHSLEWLRKNAIVRVPEGVPGEGRLVYPKMTQLATFTSYLMRHCLEGKELYWKL
HHHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEE
FADDGEDPLHFPFLSLATQLMDLPAEHFLENIRCIFHDRDLVSGTFFFANTRIDLQAIKN
ECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEEECCCHHCEEEEEEECEEEHHHHCC
TALMTMEGERDDIAAPGQTQAAQELCRSIPSAKRRHILIEGCGHFSLFHGHICRTRVVPE
CEEEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEEEECCCCHHHHHHHHHHHHHHH
IMGFLHHEART
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA