| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679011
Identifier: 182679011
GI number: 182679011
Start: 2338022
End: 2338681
Strand: Direct
Name: 182679011
Synonym: Bind_2046
Alternate gene names: NA
Gene position: 2338022-2338681 (Clockwise)
Preceding gene: 182679010
Following gene: 182679012
Centisome position: 56.07
GC content: 58.64
Gene sequence:
>660_bases ATGCATCCCTCCACTCTCGCCGATTTTCTCGACAGCGAAGCTGGCGCCGCACTGCGGGCCAGTTTCCACGAGCGAGCGCT GGCCAATGGCGCTTTGTTTCGGCAAGAAGAGGACGCAGATCAAATTGTTCTGGTGAAACAGGGACGCCTGCGTGTCTATC TCGCTGATCCCGAGCGCGAACTGACATTGGTCTATTTGAATGAAGGCGACGTCTTCAGCACACATACGCGAGCACACCTT CAGGCGGTACGGCCGAGTCTGTTGCTTTTAGCCCCCCGCAAGATCATCGAGCGTGAACTTGGCCACTATCCGGCCCTTCA GGCCGCCGTGATCCGTGTCTTGGCCACTGTCCTCAACCAAACCATGACCCTTCTTGAAGACCTGACCTTCCATCAGGTGC GTGGACGCATCGCGCGCTATCTTTTGCGCTGCGCCAAGACACAAAAGGCGCCTATCGAGCCGGGCAGCCTCATTCGTCTC GATCTCAATGTCGAGGAACTTGCCGCCCTTCTCGGCACGACACGACAAACGGCCTCGACCGAACTCAACGCCATGATCCA TGCGGGCGCCATCGCCAGACAGGGGCGCAAACATTTCAAGCTCTGCCTTCCGGAGCGCCTCCTGAACTGGGCCAGCGAGG AACCAACGTCAGCCATCTGA
Upstream 100 bases:
>100_bases GGAATTTCTGAAATCCCCGGCGCAATGGTCGGCAGCGCATGGTGGTATTGCCGAATTCAAGCCTGCCAGTTGAACCCCGT CGTTTGCGTCCCAGCCATCT
Downstream 100 bases:
>100_bases CAGACGGTTAAAAAGCGCAGGACTAAACCTGTCATTCGCAACCAGGGAGTTGACAATGACAGCGCAAGTCGATCGCTATG TTAGTTTCAAGGGAATTGAT
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; Nitrite And Nitric Oxide Reductase Regulator; Carbon Monoxide Dehydrogenase CooA Protein
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MHPSTLADFLDSEAGAALRASFHERALANGALFRQEEDADQIVLVKQGRLRVYLADPERELTLVYLNEGDVFSTHTRAHL QAVRPSLLLLAPRKIIERELGHYPALQAAVIRVLATVLNQTMTLLEDLTFHQVRGRIARYLLRCAKTQKAPIEPGSLIRL DLNVEELAALLGTTRQTASTELNAMIHAGAIARQGRKHFKLCLPERLLNWASEEPTSAI
Sequences:
>Translated_219_residues MHPSTLADFLDSEAGAALRASFHERALANGALFRQEEDADQIVLVKQGRLRVYLADPERELTLVYLNEGDVFSTHTRAHL QAVRPSLLLLAPRKIIERELGHYPALQAAVIRVLATVLNQTMTLLEDLTFHQVRGRIARYLLRCAKTQKAPIEPGSLIRL DLNVEELAALLGTTRQTASTELNAMIHAGAIARQGRKHFKLCLPERLLNWASEEPTSAI >Mature_219_residues MHPSTLADFLDSEAGAALRASFHERALANGALFRQEEDADQIVLVKQGRLRVYLADPERELTLVYLNEGDVFSTHTRAHL QAVRPSLLLLAPRKIIERELGHYPALQAAVIRVLATVLNQTMTLLEDLTFHQVRGRIARYLLRCAKTQKAPIEPGSLIRL DLNVEELAALLGTTRQTASTELNAMIHAGAIARQGRKHFKLCLPERLLNWASEEPTSAI
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24413; Mature: 24413
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPSTLADFLDSEAGAALRASFHERALANGALFRQEEDADQIVLVKQGRLRVYLADPERE CCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCEEEEEECCCCC LTLVYLNEGDVFSTHTRAHLQAVRPSLLLLAPRKIIERELGHYPALQAAVIRVLATVLNQ EEEEEECCCCEECHHHHHHHHHHCCHHHEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHH TMTLLEDLTFHQVRGRIARYLLRCAKTQKAPIEPGSLIRLDLNVEELAALLGTTRQTAST HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHH ELNAMIHAGAIARQGRKHFKLCLPERLLNWASEEPTSAI HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHPSTLADFLDSEAGAALRASFHERALANGALFRQEEDADQIVLVKQGRLRVYLADPERE CCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCEEEEEECCCCC LTLVYLNEGDVFSTHTRAHLQAVRPSLLLLAPRKIIERELGHYPALQAAVIRVLATVLNQ EEEEEECCCCEECHHHHHHHHHHCCHHHEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHH TMTLLEDLTFHQVRGRIARYLLRCAKTQKAPIEPGSLIRLDLNVEELAALLGTTRQTAST HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHH ELNAMIHAGAIARQGRKHFKLCLPERLLNWASEEPTSAI HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA