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The map label for this gene is 182678992

Identifier: 182678992

GI number: 182678992

Start: 2317955

End: 2318581

Strand: Direct

Name: 182678992

Synonym: Bind_2027

Alternate gene names: NA

Gene position: 2317955-2318581 (Clockwise)

Preceding gene: 182678988

Following gene: 182678993

Centisome position: 55.58

GC content: 57.58

Gene sequence:

>627_bases
GTGAGACCGCTTGAACATCGTGTGCCGCGTGGCCAGAAACGCCGGGAAGAAATCGCCGCGATCGCGGAACAGATTTTCCT
GGAATTAGGTTTTGCCGAGACGACGATGCAGATCGTCGCGACCCGCGCTGGCGCCTCCAAGGAGACGCTGTACCGGCATT
TCGGCTGTAAGGCGGAACTGTTTTCCGAAGTCATGAACGCACGTTGCCAACGCTTCATGACCGGTGCGGCCGAGGTTTGC
GCTCATGAGAATGATCCGGCAACCGTTCTGGCAGCCATTGGCAGCGCTTTGCTCGACCTGATCCTCAGCCCCAACGGTCT
CGCAATGTATCGGATCGTCGTCACTGAAACGGTGCGTACCCCGGAACTCGGCCATATTTTTTTCAACCTTGGTCCGAACC
GGCTTCTCGCTCAGGTCAGCGATTATCTCAAATCCATGACTGCCGCGGGCAAACTCAACTGCCCCCAACCCGTGCTTGCC
GCCAAATTATTCCTTGGTGCCGTCAGCTCCTCGCATCAGATGCGGGAACTGGCGATCCCCGGTGTGGAAATCATCGGCGA
GGAGGAGAAGAAAATGTATGTGGACGAGGCGGTCGCGATGTTCCTCGCACGTTACGGCCGACCTTAA

Upstream 100 bases:

>100_bases
AAAAGGATCCAATTCGGACTTGTTTTAGCCTCCGTCCAAAGGCAATGTCACATATCCGAACTGATGAGTTCGTATAAAAT
GGAAAGGTCGAGACGTCAAG

Downstream 100 bases:

>100_bases
GCAACACGAGCCCCGATTTTCAGGATAAGTCTAAAGCCAAATGTCGGATTCCCTCACCGCTCTTTTGCGCTGGTATGCGG
CGATGGGCGTCGATATCGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcription Regulator Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; TetR-Like Virulence Regulator; TetR Family Transcriptional RegulatoR; Regulatory Protein Tetr; Calsymin Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; TetR-Type Transcriptional Regulator; Bacterial Regulatory Protein; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcription Regulator Protein Tetr Family; Transcriptional Regulator TetR; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MRPLEHRVPRGQKRREEIAAIAEQIFLELGFAETTMQIVATRAGASKETLYRHFGCKAELFSEVMNARCQRFMTGAAEVC
AHENDPATVLAAIGSALLDLILSPNGLAMYRIVVTETVRTPELGHIFFNLGPNRLLAQVSDYLKSMTAAGKLNCPQPVLA
AKLFLGAVSSSHQMRELAIPGVEIIGEEEKKMYVDEAVAMFLARYGRP

Sequences:

>Translated_208_residues
MRPLEHRVPRGQKRREEIAAIAEQIFLELGFAETTMQIVATRAGASKETLYRHFGCKAELFSEVMNARCQRFMTGAAEVC
AHENDPATVLAAIGSALLDLILSPNGLAMYRIVVTETVRTPELGHIFFNLGPNRLLAQVSDYLKSMTAAGKLNCPQPVLA
AKLFLGAVSSSHQMRELAIPGVEIIGEEEKKMYVDEAVAMFLARYGRP
>Mature_208_residues
MRPLEHRVPRGQKRREEIAAIAEQIFLELGFAETTMQIVATRAGASKETLYRHFGCKAELFSEVMNARCQRFMTGAAEVC
AHENDPATVLAAIGSALLDLILSPNGLAMYRIVVTETVRTPELGHIFFNLGPNRLLAQVSDYLKSMTAAGKLNCPQPVLA
AKLFLGAVSSSHQMRELAIPGVEIIGEEEKKMYVDEAVAMFLARYGRP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22907; Mature: 22907

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLEHRVPRGQKRREEIAAIAEQIFLELGFAETTMQIVATRAGASKETLYRHFGCKAEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
FSEVMNARCQRFMTGAAEVCAHENDPATVLAAIGSALLDLILSPNGLAMYRIVVTETVRT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCC
PELGHIFFNLGPNRLLAQVSDYLKSMTAAGKLNCPQPVLAAKLFLGAVSSSHQMRELAIP
CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCC
GVEIIGEEEKKMYVDEAVAMFLARYGRP
CHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPLEHRVPRGQKRREEIAAIAEQIFLELGFAETTMQIVATRAGASKETLYRHFGCKAEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
FSEVMNARCQRFMTGAAEVCAHENDPATVLAAIGSALLDLILSPNGLAMYRIVVTETVRT
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHCCC
PELGHIFFNLGPNRLLAQVSDYLKSMTAAGKLNCPQPVLAAKLFLGAVSSSHQMRELAIP
CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCC
GVEIIGEEEKKMYVDEAVAMFLARYGRP
CHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA