| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is cbh [H]
Identifier: 182678887
GI number: 182678887
Start: 2189080
End: 2190150
Strand: Direct
Name: cbh [H]
Synonym: Bind_1920
Alternate gene names: 182678887
Gene position: 2189080-2190150 (Clockwise)
Preceding gene: 182678883
Following gene: 182678891
Centisome position: 52.49
GC content: 56.58
Gene sequence:
>1071_bases ATGAGCAACACCAAACACTCATTCGCCCGCTCCCTGCTCGCGCTCAGCCTCATGTCATTGGTGATGACAACCCCCCTGGC AGAAGCCTGTACACGGGCGGTGTTTCTCGGGCAAGATGGCCAAGTCGTCACGGCGCGTTCCATGGATTGGAAGACGGATA TCGGCACCAATCTGTGGATCTTTCCGCGCGGCATGGAGCGCAATGGCGAGACGGGGCCGAAGACTGTTCGCTGGACGTCG AAATATGGCAGCGTCATCGCCTCCGCCTATGATGTCTCGACCTCGGATGGTCTCAATGAGGCAGGTCTTTCGGCCAATCT GCTTTGGCTGGTCGAGTCCCAATACCCCGCCTTCGACCCGTCCAAGCCGGGGCTCACTATCGCCGCCTGGGCGCAATATG TGCTCGACAATTTCGCCACTGTGGCCGAGGCCGTGGATGCACTTTCACGCGAGCCTTTCGTGCCGGTGACGGCGGATATT CCAGGAGAGACGCGCCTTGCGACCGTTCACCTTTCCATTTCCGATGCGACGGGTGACAGCGCCATCATCGAATATGTCAA CGGCAAGCAGGTCATTCATCACGATCGCAAATATCAGGTGATGACCAATTCGCCTTTGTTCGATCAGCAATTGGCATTGG ACTCTTATTGGCAGCAGATTGGCGGCACAATCATGCTGCCGGGCACGAACAGGGCGTCCGACCGTTTCGCACGCGCGTCC TTTTACATCAATGCCATTCCGAAGGATGAGACGCCCAATCGCACTATTGCCAGCGTCTTCAGTGTCATTCGCAACGCATC CGTGCCCTATGGACTGAACACGGCCGAGGAGCCCAATATTTCCTCGACACGATGGCGCACCGTCGCGGACCACAAGCGCA AGCTTTATTTCTTTGAATCGGCGCTGACGCCCAATGTCTTCTGGGTCGATCTCAAAACCATCGACTTCTCGCCGGAAACC GGAAAAGTGCGCAAGCTCGACCTCGGCCCGGAGCAGACCAACATCTTTTCCGGCAATGCAACGGAGAATTTCAAGGAAGC CAAGCCATTCAGATTTTTAGGCTTGCCTTGA
Upstream 100 bases:
>100_bases TAAAAAGTAATACTTTATCCTCATTATTACAAGAGAAAAGCAGCAAACTGGTCTTCGCCATATAGGTAAGCCAAATCTCA CCGTCAAACTGAAACCACCC
Downstream 100 bases:
>100_bases GCGCCGTGAACAGGCCGTTTTATACCAACGGTCATGATCAAGACCGTTGGACCGCTCTTGAATTTTCGCTCTCGCTTTGT AAAAGCGAAAATTCAAGAAA
Product: choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSNTKHSFARSLLALSLMSLVMTTPLAEACTRAVFLGQDGQVVTARSMDWKTDIGTNLWIFPRGMERNGETGPKTVRWTS KYGSVIASAYDVSTSDGLNEAGLSANLLWLVESQYPAFDPSKPGLTIAAWAQYVLDNFATVAEAVDALSREPFVPVTADI PGETRLATVHLSISDATGDSAIIEYVNGKQVIHHDRKYQVMTNSPLFDQQLALDSYWQQIGGTIMLPGTNRASDRFARAS FYINAIPKDETPNRTIASVFSVIRNASVPYGLNTAEEPNISSTRWRTVADHKRKLYFFESALTPNVFWVDLKTIDFSPET GKVRKLDLGPEQTNIFSGNATENFKEAKPFRFLGLP
Sequences:
>Translated_356_residues MSNTKHSFARSLLALSLMSLVMTTPLAEACTRAVFLGQDGQVVTARSMDWKTDIGTNLWIFPRGMERNGETGPKTVRWTS KYGSVIASAYDVSTSDGLNEAGLSANLLWLVESQYPAFDPSKPGLTIAAWAQYVLDNFATVAEAVDALSREPFVPVTADI PGETRLATVHLSISDATGDSAIIEYVNGKQVIHHDRKYQVMTNSPLFDQQLALDSYWQQIGGTIMLPGTNRASDRFARAS FYINAIPKDETPNRTIASVFSVIRNASVPYGLNTAEEPNISSTRWRTVADHKRKLYFFESALTPNVFWVDLKTIDFSPET GKVRKLDLGPEQTNIFSGNATENFKEAKPFRFLGLP >Mature_355_residues SNTKHSFARSLLALSLMSLVMTTPLAEACTRAVFLGQDGQVVTARSMDWKTDIGTNLWIFPRGMERNGETGPKTVRWTSK YGSVIASAYDVSTSDGLNEAGLSANLLWLVESQYPAFDPSKPGLTIAAWAQYVLDNFATVAEAVDALSREPFVPVTADIP GETRLATVHLSISDATGDSAIIEYVNGKQVIHHDRKYQVMTNSPLFDQQLALDSYWQQIGGTIMLPGTNRASDRFARASF YINAIPKDETPNRTIASVFSVIRNASVPYGLNTAEEPNISSTRWRTVADHKRKLYFFESALTPNVFWVDLKTIDFSPETG KVRKLDLGPEQTNIFSGNATENFKEAKPFRFLGLP
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 39360; Mature: 39229
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTKHSFARSLLALSLMSLVMTTPLAEACTRAVFLGQDGQVVTARSMDWKTDIGTNLWI CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCEEEEECCCCCCCCCCEEEE FPRGMERNGETGPKTVRWTSKYGSVIASAYDVSTSDGLNEAGLSANLLWLVESQYPAFDP EECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC SKPGLTIAAWAQYVLDNFATVAEAVDALSREPFVPVTADIPGETRLATVHLSISDATGDS CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCCC AIIEYVNGKQVIHHDRKYQVMTNSPLFDQQLALDSYWQQIGGTIMLPGTNRASDRFARAS EEEEECCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEE FYINAIPKDETPNRTIASVFSVIRNASVPYGLNTAEEPNISSTRWRTVADHKRKLYFFES EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEEC ALTPNVFWVDLKTIDFSPETGKVRKLDLGPEQTNIFSGNATENFKEAKPFRFLGLP CCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCHHHCCCEEEECCC >Mature Secondary Structure SNTKHSFARSLLALSLMSLVMTTPLAEACTRAVFLGQDGQVVTARSMDWKTDIGTNLWI CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEECCCCCEEEEECCCCCCCCCCEEEE FPRGMERNGETGPKTVRWTSKYGSVIASAYDVSTSDGLNEAGLSANLLWLVESQYPAFDP EECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCC SKPGLTIAAWAQYVLDNFATVAEAVDALSREPFVPVTADIPGETRLATVHLSISDATGDS CCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCCC AIIEYVNGKQVIHHDRKYQVMTNSPLFDQQLALDSYWQQIGGTIMLPGTNRASDRFARAS EEEEECCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHEEEE FYINAIPKDETPNRTIASVFSVIRNASVPYGLNTAEEPNISSTRWRTVADHKRKLYFFES EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEEC ALTPNVFWVDLKTIDFSPETGKVRKLDLGPEQTNIFSGNATENFKEAKPFRFLGLP CCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]