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The map label for this gene is yqxC [H]

Identifier: 182678784

GI number: 182678784

Start: 2061806

End: 2062576

Strand: Direct

Name: yqxC [H]

Synonym: Bind_1813

Alternate gene names: 182678784

Gene position: 2061806-2062576 (Clockwise)

Preceding gene: 182678783

Following gene: 182678785

Centisome position: 49.44

GC content: 59.92

Gene sequence:

>771_bases
ATGTCCGGCATGTCAGCAAATCCGTCGAGGCCTCCCCTTTCTCGCGCCAGGCAACGTGCCGATCGCGTGCTGGTGGAGCA
TGGTCTTTTCGAGAGCCGAGCCAAGGCGCAGGAAGCCATCGCGGCTGGGTTGGTGCGTGTCGAGGGCGAAGTTTTGCACA
AAGCCTCGCAAATGATCGATGCCGACCATTATATCGAGGCTTCGGCACCCTACCCCTGGGTCTCACGCGGCGGTGTCAAA
CTCGCGGCGGGCATCGAGGCTTTCGGCGTCGATCCCCGCAACCGCCTCTGCCTCGATATCGGCGCCTCGACCGGCGGCTT
CACCCATGTGCTTCTAAGCCATGGAGCCAAGAAGGTCATCGCCATTGAAGTCGGCCATGGTCAATTGCACGAGACCATCG
CCAAAAATCCGCGTGTCGACTCGCGCGAGGGTGTCGATGCCCGAGATCTGCGACCGCAGGATTTCCCCATTCTCCCCTCG
CTCATCACCTGTGACGCGAGTTTCATCTCCCTGCACCTGCTGCTGCCCGCCATTCTGGCGCTGGGTGATGATGATGCCTT
TTTCATCGGCCTGATCAAACCGCAATTCGAAGCGGGTCGCGGCCATAAAAGCATTATCAGGGATGGCGCGATCCATGCGC
GGGTTTGTGCAGAGGTCGAGGAGCATGTTGCTAAACTCGGCTGGCAGAAAGAAGGGATCATTCCCTCCCCCATTACCGGC
ACCGACGGGAACCAGGAATTTTTGATCGGGGCGCGACGGACAAAGGCCTGA

Upstream 100 bases:

>100_bases
TTTGAAGACGCCCTTGGCAAAGACCAGGCGGGTGCAGCGCCGCGCGTCGAACGCCAGACCACACCGTGGCAAGCTCTCAC
ACGGCTCCTAGATTTTTTAA

Downstream 100 bases:

>100_bases
TGATCGATCTTTGCGCCCATCTCACCATAGACCGGCTCGGTCAGCGCGGCGAAGGCATTGCCCAAACCGCCGAGGGTCTC
GTCTTTGTACCCTATGCCTT

Product: hemolysin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSGMSANPSRPPLSRARQRADRVLVEHGLFESRAKAQEAIAAGLVRVEGEVLHKASQMIDADHYIEASAPYPWVSRGGVK
LAAGIEAFGVDPRNRLCLDIGASTGGFTHVLLSHGAKKVIAIEVGHGQLHETIAKNPRVDSREGVDARDLRPQDFPILPS
LITCDASFISLHLLLPAILALGDDDAFFIGLIKPQFEAGRGHKSIIRDGAIHARVCAEVEEHVAKLGWQKEGIIPSPITG
TDGNQEFLIGARRTKA

Sequences:

>Translated_256_residues
MSGMSANPSRPPLSRARQRADRVLVEHGLFESRAKAQEAIAAGLVRVEGEVLHKASQMIDADHYIEASAPYPWVSRGGVK
LAAGIEAFGVDPRNRLCLDIGASTGGFTHVLLSHGAKKVIAIEVGHGQLHETIAKNPRVDSREGVDARDLRPQDFPILPS
LITCDASFISLHLLLPAILALGDDDAFFIGLIKPQFEAGRGHKSIIRDGAIHARVCAEVEEHVAKLGWQKEGIIPSPITG
TDGNQEFLIGARRTKA
>Mature_255_residues
SGMSANPSRPPLSRARQRADRVLVEHGLFESRAKAQEAIAAGLVRVEGEVLHKASQMIDADHYIEASAPYPWVSRGGVKL
AAGIEAFGVDPRNRLCLDIGASTGGFTHVLLSHGAKKVIAIEVGHGQLHETIAKNPRVDSREGVDARDLRPQDFPILPSL
ITCDASFISLHLLLPAILALGDDDAFFIGLIKPQFEAGRGHKSIIRDGAIHARVCAEVEEHVAKLGWQKEGIIPSPITGT
DGNQEFLIGARRTKA

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 27560; Mature: 27429

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMSANPSRPPLSRARQRADRVLVEHGLFESRAKAQEAIAAGLVRVEGEVLHKASQMID
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADHYIEASAPYPWVSRGGVKLAAGIEAFGVDPRNRLCLDIGASTGGFTHVLLSHGAKKVI
CCCEEECCCCCCCCCCCCEEEEECCHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEE
AIEVGHGQLHETIAKNPRVDSREGVDARDLRPQDFPILPSLITCDASFISLHLLLPAILA
EEEECCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
LGDDDAFFIGLIKPQFEAGRGHKSIIRDGAIHARVCAEVEEHVAKLGWQKEGIIPSPITG
CCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TDGNQEFLIGARRTKA
CCCCCEEEEECCCCCC
>Mature Secondary Structure 
SGMSANPSRPPLSRARQRADRVLVEHGLFESRAKAQEAIAAGLVRVEGEVLHKASQMID
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ADHYIEASAPYPWVSRGGVKLAAGIEAFGVDPRNRLCLDIGASTGGFTHVLLSHGAKKVI
CCCEEECCCCCCCCCCCCEEEEECCHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCEEE
AIEVGHGQLHETIAKNPRVDSREGVDARDLRPQDFPILPSLITCDASFISLHLLLPAILA
EEEECCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHH
LGDDDAFFIGLIKPQFEAGRGHKSIIRDGAIHARVCAEVEEHVAKLGWQKEGIIPSPITG
CCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
TDGNQEFLIGARRTKA
CCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]