| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yccK [H]
Identifier: 182678738
GI number: 182678738
Start: 2000987
End: 2001976
Strand: Direct
Name: yccK [H]
Synonym: Bind_1767
Alternate gene names: 182678738
Gene position: 2000987-2001976 (Clockwise)
Preceding gene: 182678736
Following gene: 182678742
Centisome position: 47.98
GC content: 62.42
Gene sequence:
>990_bases ATGCGGAAACGGGCACTTGGCAAGAGCGGCCTCGATGTTTCAGCGATCGGCTTCGGCTGCATGGGTCTCAATTTCAGCTA TAGTCACGCACTGACCAAGGACGAGAGCATTACGCTCATCCGTCAGGCGGTGGAGCGTGGCATCACCTTCTTCGACACGG CCGAGGTCTACGGACCATTTACCAACGAGGAAATCGTCGGTGAGGCACTGGCGCCGTTCCGCGACCAAGTGGTGATCGCC ACCAAGTTCGGCTTCAACATCGTGGACGGTAAAATGGCCGGCATGAACAGCCGGCCCGAGCACATTCGCGCGGTCTGCGA CGCGTCGCTCAAGCGTCTGGGCGTCGAGGTGATCGACCTCTTCTACCAGCACCGTGTCGATCCCAACGTCCCGATCGAGG ATGTGGCCGGCACCGTCAGGGAGCTGATCTGGGAAGGCAAGGTCAAGCATTTCGGCCTGTCCGAGCCGGGGGCGCAAACC GTTCGTAGCGCGCATGCGGTGCAGCCGATCACGGCGCTGCAAAATGAATATTCGCTATGGACCCGCGGCCCGGAGACCAA TGGCATCCTTCGGGCCTGCGAGGAGCTCGGCATTGGCCTCGTCGCCTACAGCCCGCTCGGCAAGGGCTTCCTGACGGGCG CGATGAGCAAGGACACAACGATCGGCGAGAATGACTTCCGCAAAATCCTGCCGCGTTTCACGCCCGAAGCGATGGAGAAA AACCAGGCGCTGGTCGACCTCCTGAAGCGCATCGCAGGCGAGAAGAAGGCGACGCCCGCCCAGATTGCGCTCGCCTGGCT GCTGGCGCAGAAGCCCTGGATCGTGCCGATTCCAGGCACCACCAAACTCCACCGGCTGGAAGAAAATCTCGGCGCAGCCT CCATCGTGCTGACGGCTGATGATCTCGCCGAGATCGAGCGCGCGGCAGCCGCCATCCCGATCGAAGGTGAGCGCTACCCA GAGCAGCTAATGGCCACCACCGGCCGCTGA
Upstream 100 bases:
>100_bases TCACTTCATGCAGTTTATAGCGCCTAATTGATCAACGCCGATCGGCCTATCTTCACGCCAATGCGACGGCAGGATGCCGC GAAGCGATGGAGTATTGGCA
Downstream 100 bases:
>100_bases GGCCCCTATCGATCCGGACCAAAGTGTATCAATTTGCAGAAGGAACGGGGCAACTCATATCGCCTTCTTTACAATTCAAA TAATTCTGCAGGTCTTTGAT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRKRALGKSGLDVSAIGFGCMGLNFSYSHALTKDESITLIRQAVERGITFFDTAEVYGPFTNEEIVGEALAPFRDQVVIA TKFGFNIVDGKMAGMNSRPEHIRAVCDASLKRLGVEVIDLFYQHRVDPNVPIEDVAGTVRELIWEGKVKHFGLSEPGAQT VRSAHAVQPITALQNEYSLWTRGPETNGILRACEELGIGLVAYSPLGKGFLTGAMSKDTTIGENDFRKILPRFTPEAMEK NQALVDLLKRIAGEKKATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAASIVLTADDLAEIERAAAAIPIEGERYP EQLMATTGR
Sequences:
>Translated_329_residues MRKRALGKSGLDVSAIGFGCMGLNFSYSHALTKDESITLIRQAVERGITFFDTAEVYGPFTNEEIVGEALAPFRDQVVIA TKFGFNIVDGKMAGMNSRPEHIRAVCDASLKRLGVEVIDLFYQHRVDPNVPIEDVAGTVRELIWEGKVKHFGLSEPGAQT VRSAHAVQPITALQNEYSLWTRGPETNGILRACEELGIGLVAYSPLGKGFLTGAMSKDTTIGENDFRKILPRFTPEAMEK NQALVDLLKRIAGEKKATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAASIVLTADDLAEIERAAAAIPIEGERYP EQLMATTGR >Mature_329_residues MRKRALGKSGLDVSAIGFGCMGLNFSYSHALTKDESITLIRQAVERGITFFDTAEVYGPFTNEEIVGEALAPFRDQVVIA TKFGFNIVDGKMAGMNSRPEHIRAVCDASLKRLGVEVIDLFYQHRVDPNVPIEDVAGTVRELIWEGKVKHFGLSEPGAQT VRSAHAVQPITALQNEYSLWTRGPETNGILRACEELGIGLVAYSPLGKGFLTGAMSKDTTIGENDFRKILPRFTPEAMEK NQALVDLLKRIAGEKKATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAASIVLTADDLAEIERAAAAIPIEGERYP EQLMATTGR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=334, Percent_Identity=26.9461077844311, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI27436969, Length=334, Percent_Identity=26.3473053892216, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI4504825, Length=331, Percent_Identity=26.2839879154079, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI27436962, Length=334, Percent_Identity=26.9461077844311, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI27436966, Length=334, Percent_Identity=26.9461077844311, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI27436971, Length=321, Percent_Identity=27.4143302180685, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI223718702, Length=283, Percent_Identity=29.3286219081272, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI41327764, Length=274, Percent_Identity=29.5620437956204, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI41152114, Length=283, Percent_Identity=27.9151943462898, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789375, Length=330, Percent_Identity=32.4242424242424, Blast_Score=157, Evalue=8e-40, Organism=Escherichia coli, GI87081735, Length=334, Percent_Identity=32.9341317365269, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1788070, Length=327, Percent_Identity=31.4984709480122, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787674, Length=303, Percent_Identity=29.042904290429, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=29.1066282420749, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788081, Length=313, Percent_Identity=24.9201277955272, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI48994888, Length=288, Percent_Identity=26.3888888888889, Blast_Score=74, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6325384, Length=336, Percent_Identity=29.4642857142857, Blast_Score=123, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=25.8258258258258, Blast_Score=99, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6323998, Length=339, Percent_Identity=28.6135693215339, Blast_Score=95, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=26.7326732673267, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=28.2868525896414, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6319951, Length=296, Percent_Identity=26.6891891891892, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24640980, Length=343, Percent_Identity=24.198250728863, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI45549126, Length=346, Percent_Identity=24.2774566473988, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646155, Length=160, Percent_Identity=33.75, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646159, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 35954; Mature: 35954
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRALGKSGLDVSAIGFGCMGLNFSYSHALTKDESITLIRQAVERGITFFDTAEVYGPF CCCCCCCCCCCCCHHHHHEEECCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCC TNEEIVGEALAPFRDQVVIATKFGFNIVDGKMAGMNSRPEHIRAVCDASLKRLGVEVIDL CCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FYQHRVDPNVPIEDVAGTVRELIWEGKVKHFGLSEPGAQTVRSAHAVQPITALQNEYSLW HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE TRGPETNGILRACEELGIGLVAYSPLGKGFLTGAMSKDTTIGENDFRKILPRFTPEAMEK ECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHC NQALVDLLKRIAGEKKATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAASIVLTAD CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCEEEEEEHH DLAEIERAAAAIPIEGERYPEQLMATTGR HHHHHHHHHHCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MRKRALGKSGLDVSAIGFGCMGLNFSYSHALTKDESITLIRQAVERGITFFDTAEVYGPF CCCCCCCCCCCCCHHHHHEEECCCCCHHHCCCCCHHHHHHHHHHHCCCEEEEHHHHCCCC TNEEIVGEALAPFRDQVVIATKFGFNIVDGKMAGMNSRPEHIRAVCDASLKRLGVEVIDL CCHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FYQHRVDPNVPIEDVAGTVRELIWEGKVKHFGLSEPGAQTVRSAHAVQPITALQNEYSLW HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE TRGPETNGILRACEELGIGLVAYSPLGKGFLTGAMSKDTTIGENDFRKILPRFTPEAMEK ECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHC NQALVDLLKRIAGEKKATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAASIVLTAD CHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCEEEEEEHH DLAEIERAAAAIPIEGERYPEQLMATTGR HHHHHHHHHHCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]