| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678726
Identifier: 182678726
GI number: 182678726
Start: 1984278
End: 1984796
Strand: Reverse
Name: 182678726
Synonym: Bind_1753
Alternate gene names: NA
Gene position: 1984796-1984278 (Counterclockwise)
Preceding gene: 182678727
Following gene: 182678725
Centisome position: 47.6
GC content: 53.95
Gene sequence:
>519_bases ATGAATCTTTGGTTCCGACTCCTCAATATCGTGCTCGGCAGCCTGGTACGGCGTCGCCTGACGTTCGAAGAGCAGTCCAT TCTGCTTTTTCGCGTGATGCCGCATGATCTTGATCTCAATGTGCATATGAACAATGCCCGCTATTTGGCGCTGATGGATC TCGGGCGTATTGATTTTCTCCTCCGCTCCGGCGTGTGGCGGCGTGTACGAAAGCTGGGCGGTCACGCTGTCGTCGGTGGT CTTCTCGTGCGGTTCCGGCGACCCTTGGCGCCATTTCAGGCGGTAACCTTGACGACCGAATGTGTCTATTGGGACGAAAA ATGGGTCTATTTTTCACATCAAATGAAGTCAGCGGGCAGGCTTGTCTGTTTGACCGTGGCCCGAACGGCTTTCATCCGTG ACGGTGTTGTGTTGCCTCCTCACGAGGTCATACCCAAAGAGATCTCCTCTCGATCAGTCCCCGACTGGATTACACAATGG TCTGATCTTGATGGGAGTTTCGCGGGTCAGTTGGCATAA
Upstream 100 bases:
>100_bases AACAGGTGCGCTGTTTTCTTCCATCATGGCTGGCAGCAAATCAACGATGGCTTTCGACGAGGCTGCGTTTTGAACCCTGC CAGGGTCTGAAGGACGTATC
Downstream 100 bases:
>100_bases GTGATCGTTGGGGCCGTCGCGGAACGCAGGCAGGACAGGAGAGAACGTGAATGAAGGTGCTCGTCCCAATAAAGCGGGTC GTTGATTACAATGTCAAGAT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Acyl-CoA Thioesterase
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNLWFRLLNIVLGSLVRRRLTFEEQSILLFRVMPHDLDLNVHMNNARYLALMDLGRIDFLLRSGVWRRVRKLGGHAVVGG LLVRFRRPLAPFQAVTLTTECVYWDEKWVYFSHQMKSAGRLVCLTVARTAFIRDGVVLPPHEVIPKEISSRSVPDWITQW SDLDGSFAGQLA
Sequences:
>Translated_172_residues MNLWFRLLNIVLGSLVRRRLTFEEQSILLFRVMPHDLDLNVHMNNARYLALMDLGRIDFLLRSGVWRRVRKLGGHAVVGG LLVRFRRPLAPFQAVTLTTECVYWDEKWVYFSHQMKSAGRLVCLTVARTAFIRDGVVLPPHEVIPKEISSRSVPDWITQW SDLDGSFAGQLA >Mature_172_residues MNLWFRLLNIVLGSLVRRRLTFEEQSILLFRVMPHDLDLNVHMNNARYLALMDLGRIDFLLRSGVWRRVRKLGGHAVVGG LLVRFRRPLAPFQAVTLTTECVYWDEKWVYFSHQMKSAGRLVCLTVARTAFIRDGVVLPPHEVIPKEISSRSVPDWITQW SDLDGSFAGQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7706200, Length=107, Percent_Identity=36.4485981308411, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640045, Length=146, Percent_Identity=28.0821917808219, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI18858163, Length=158, Percent_Identity=27.2151898734177, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19846; Mature: 19846
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLWFRLLNIVLGSLVRRRLTFEEQSILLFRVMPHDLDLNVHMNNARYLALMDLGRIDFL CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH LRSGVWRRVRKLGGHAVVGGLLVRFRRPLAPFQAVTLTTECVYWDEKWVYFSHQMKSAGR HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEEEHHHCCCCC LVCLTVARTAFIRDGVVLPPHEVIPKEISSRSVPDWITQWSDLDGSFAGQLA EEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNLWFRLLNIVLGSLVRRRLTFEEQSILLFRVMPHDLDLNVHMNNARYLALMDLGRIDFL CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH LRSGVWRRVRKLGGHAVVGGLLVRFRRPLAPFQAVTLTTECVYWDEKWVYFSHQMKSAGR HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCEEEEEEHHHCCCCC LVCLTVARTAFIRDGVVLPPHEVIPKEISSRSVPDWITQWSDLDGSFAGQLA EEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA