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The map label for this gene is ytfM [C]

Identifier: 182678689

GI number: 182678689

Start: 1936308

End: 1938269

Strand: Direct

Name: ytfM [C]

Synonym: Bind_1716

Alternate gene names: 182678689

Gene position: 1936308-1938269 (Clockwise)

Preceding gene: 182678688

Following gene: 182678690

Centisome position: 46.43

GC content: 59.43

Gene sequence:

>1962_bases
TTGCGCTCCGTTTCAACGGCCTGTGCCCTGATCCTGACGACTTTCGCGGCCCAGATCCTCGCCGCGACTGATCTGCGCGC
CGATGACGATCCGACTTTCTTCAATCAGTTCTTTTCCTGGTTCAATCCGAACGGCCAATCCGACCAGAACGATCAGAAGA
AACCTCTCTTCGATGGCGTTCCTTATGAGGTCACGATCACCGTCTCGGGCGATGATTCCCTGACATCGACCCTGACCGAC
GCCTCCAATCTGAAAAGCCTGCAGGAAGTAACCCCTTCAGGCGTGGCCGGTCTCATCCGCCGCGCCATCGCCGATCGACC
AAGATTGCGTGCCGCCCTTTATGGGCAAGGCTATTTCGCGGGGGTGAGCCAGATCAAAGTGGCAGGCTTTCCGCCCGATC
AATTGGAAGCCTTCGCCGCCGTGGAGAAAGCCCGCAAGGCCGGGCCCGTGCCGGTCACGATTCATGTCGTGACCGGACAG
CGCTTCAATTATGGCAAGCTCACCATTTTGAACGCCGCCTCCAAACAGCCGCTCAAGGATATGCCCTCGACCCATGATTT
GCGGCTCGATCCCGGCCAACCGGCCTCGGCTGACCAGGTGTTTCGGGCGGAACAGGCGATCGTCGATCACTTGCGTAACG
AAGGCCATCCCTTCGCCAAGATCGCCAGTCGGGACATTGTCGCCGATCACGCGACCCGGGAACTCGACATGACCTTTACT
GTCGATCCAGGTCCAAGTGGTCGTTTCGGCCATATCGAGGTGAAGGGAACGCAGGACCTCGACCGGAATTTCGTCGAACG
CCAGATCGATATCGAGCGCGGCGAGCCTTATTCACCCGACCGGCTGGCGCGGATCCGCAGGCGGCTCGTTGCGCTTCCAG
CCGTCGGTGCGGTGCGAATCCAAGAGGCACAGCAGCTTGATTCACATGGAGAATTGCCGGTAACCATCGATGTCATCGAG
CGTCTGCCGCATTTCGTCGGCGCCAATGCCAAATATTCGAATACGGAAGGTGGCGCCGTCAATGTTTTTTGGGGCGACCG
CAACCTCTGGGGCCATGGCGAGAGCCTGCGCATCGACGGTTACGGCTCCTGGTATGGCGGCGCGCTCTACGGCGTGCCCA
ATGCCAATAGGCTCGGTTACAAGCTCGCGGCGACTTTCAACAAGCCCGATATCATCACGCCACAGGATGAACTGATCGCC
CAGGCCGCCATCCTGCGCGAGGTCACCAGCGCCTATGTGCGCGAGGCCGCGACTTTTCAGGGCGGCGTCCGTCATCGGTT
CTCTGATGAACTGTCTCTGCAGATCGGCGCCGATATCGAATATTCGCGCAGTCAGGATAATCCGCTCTATCCGCGCAATG
ATTTCACCGCTGGTGTTCCTTTCGATCTTCTTTATGATACCACGGATTCACCGCTTGATCCCTCGCGTGGCATGCGCATC
ACGGCGACGCTCGAACCCTTTGCTTCGCTCGGGCAGAACGGCCCCGGCCCGGTTATGGGAAAAGCTGTGGTCTCCGCCTA
TCACGCACTTGACGAGGATCGCCGCTATATTGTCGCCGGCCGGGTGGGTGCTGGCAGCATTGTAGGCGCCAATCTCTATG
CCGTGCCGCCGCAACGACGTTTCTATATTGGCGGCGGCGGCACTTTGCGGGGGTTCGGCTATCAGCAGGCAAGCCCGCAT
GATGGCTATAATAATCTGATCGGCGGGCTCAGCTTCTTCATGGCCTCGGCCGAATTGCGCGCCAGGATCACCGATACGAT
CGGCATCGTGCCCTTCATCGACGCAGGCGAGGCTTTTCGTGGCTCACTGCCCACGCTCAGCACCATCCGTTATGCGGCAG
GCCTCGGCCTGCGCTATTATACACCGGTCGGTCCCATACGCCTTGATGTGGGCGTACCGATTGACCGGCAACCAGGCGAT
TCCCATTACGGCGTCTATATCAGCATAGGACAGGCATTTTGA

Upstream 100 bases:

>100_bases
ATCGCACCCAATCGGTGAATATCAAGTTCGGTCCTGCAATGACTTCGATGATCTTGGAACAGGCATGAGGGAAAGATATT
TCCCCGGGCAAGGAGCGGTT

Downstream 100 bases:

>100_bases
GGCGGCTTCTCATACGATCTGGCGTCGCCGTCGCTGCCTTGGCCGGCGTGTCGAGCCTCATTCTTCTCAGCGTGCAGACG
CGTCCGGGCAAGGATGCGCT

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MRSVSTACALILTTFAAQILAATDLRADDDPTFFNQFFSWFNPNGQSDQNDQKKPLFDGVPYEVTITVSGDDSLTSTLTD
ASNLKSLQEVTPSGVAGLIRRAIADRPRLRAALYGQGYFAGVSQIKVAGFPPDQLEAFAAVEKARKAGPVPVTIHVVTGQ
RFNYGKLTILNAASKQPLKDMPSTHDLRLDPGQPASADQVFRAEQAIVDHLRNEGHPFAKIASRDIVADHATRELDMTFT
VDPGPSGRFGHIEVKGTQDLDRNFVERQIDIERGEPYSPDRLARIRRRLVALPAVGAVRIQEAQQLDSHGELPVTIDVIE
RLPHFVGANAKYSNTEGGAVNVFWGDRNLWGHGESLRIDGYGSWYGGALYGVPNANRLGYKLAATFNKPDIITPQDELIA
QAAILREVTSAYVREAATFQGGVRHRFSDELSLQIGADIEYSRSQDNPLYPRNDFTAGVPFDLLYDTTDSPLDPSRGMRI
TATLEPFASLGQNGPGPVMGKAVVSAYHALDEDRRYIVAGRVGAGSIVGANLYAVPPQRRFYIGGGGTLRGFGYQQASPH
DGYNNLIGGLSFFMASAELRARITDTIGIVPFIDAGEAFRGSLPTLSTIRYAAGLGLRYYTPVGPIRLDVGVPIDRQPGD
SHYGVYISIGQAF

Sequences:

>Translated_653_residues
MRSVSTACALILTTFAAQILAATDLRADDDPTFFNQFFSWFNPNGQSDQNDQKKPLFDGVPYEVTITVSGDDSLTSTLTD
ASNLKSLQEVTPSGVAGLIRRAIADRPRLRAALYGQGYFAGVSQIKVAGFPPDQLEAFAAVEKARKAGPVPVTIHVVTGQ
RFNYGKLTILNAASKQPLKDMPSTHDLRLDPGQPASADQVFRAEQAIVDHLRNEGHPFAKIASRDIVADHATRELDMTFT
VDPGPSGRFGHIEVKGTQDLDRNFVERQIDIERGEPYSPDRLARIRRRLVALPAVGAVRIQEAQQLDSHGELPVTIDVIE
RLPHFVGANAKYSNTEGGAVNVFWGDRNLWGHGESLRIDGYGSWYGGALYGVPNANRLGYKLAATFNKPDIITPQDELIA
QAAILREVTSAYVREAATFQGGVRHRFSDELSLQIGADIEYSRSQDNPLYPRNDFTAGVPFDLLYDTTDSPLDPSRGMRI
TATLEPFASLGQNGPGPVMGKAVVSAYHALDEDRRYIVAGRVGAGSIVGANLYAVPPQRRFYIGGGGTLRGFGYQQASPH
DGYNNLIGGLSFFMASAELRARITDTIGIVPFIDAGEAFRGSLPTLSTIRYAAGLGLRYYTPVGPIRLDVGVPIDRQPGD
SHYGVYISIGQAF
>Mature_653_residues
MRSVSTACALILTTFAAQILAATDLRADDDPTFFNQFFSWFNPNGQSDQNDQKKPLFDGVPYEVTITVSGDDSLTSTLTD
ASNLKSLQEVTPSGVAGLIRRAIADRPRLRAALYGQGYFAGVSQIKVAGFPPDQLEAFAAVEKARKAGPVPVTIHVVTGQ
RFNYGKLTILNAASKQPLKDMPSTHDLRLDPGQPASADQVFRAEQAIVDHLRNEGHPFAKIASRDIVADHATRELDMTFT
VDPGPSGRFGHIEVKGTQDLDRNFVERQIDIERGEPYSPDRLARIRRRLVALPAVGAVRIQEAQQLDSHGELPVTIDVIE
RLPHFVGANAKYSNTEGGAVNVFWGDRNLWGHGESLRIDGYGSWYGGALYGVPNANRLGYKLAATFNKPDIITPQDELIA
QAAILREVTSAYVREAATFQGGVRHRFSDELSLQIGADIEYSRSQDNPLYPRNDFTAGVPFDLLYDTTDSPLDPSRGMRI
TATLEPFASLGQNGPGPVMGKAVVSAYHALDEDRRYIVAGRVGAGSIVGANLYAVPPQRRFYIGGGGTLRGFGYQQASPH
DGYNNLIGGLSFFMASAELRARITDTIGIVPFIDAGEAFRGSLPTLSTIRYAAGLGLRYYTPVGPIRLDVGVPIDRQPGD
SHYGVYISIGQAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=144, Percent_Identity=31.25, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 70988; Mature: 70988

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVSTACALILTTFAAQILAATDLRADDDPTFFNQFFSWFNPNGQSDQNDQKKPLFDGV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PYEVTITVSGDDSLTSTLTDASNLKSLQEVTPSGVAGLIRRAIADRPRLRAALYGQGYFA
CEEEEEEECCCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCEEC
GVSQIKVAGFPPDQLEAFAAVEKARKAGPVPVTIHVVTGQRFNYGKLTILNAASKQPLKD
CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHH
MPSTHDLRLDPGQPASADQVFRAEQAIVDHLRNEGHPFAKIASRDIVADHATRELDMTFT
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCEEEEEEE
VDPGPSGRFGHIEVKGTQDLDRNFVERQIDIERGEPYSPDRLARIRRRLVALPAVGAVRI
ECCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEH
QEAQQLDSHGELPVTIDVIERLPHFVGANAKYSNTEGGAVNVFWGDRNLWGHGESLRIDG
HHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECC
YGSWYGGALYGVPNANRLGYKLAATFNKPDIITPQDELIAQAAILREVTSAYVREAATFQ
CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GGVRHRFSDELSLQIGADIEYSRSQDNPLYPRNDFTAGVPFDLLYDTTDSPLDPSRGMRI
CCHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE
TATLEPFASLGQNGPGPVMGKAVVSAYHALDEDRRYIVAGRVGAGSIVGANLYAVPPQRR
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCEEECCCCCE
FYIGGGGTLRGFGYQQASPHDGYNNLIGGLSFFMASAELRARITDTIGIVPFIDAGEAFR
EEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEHHHCCCEEEECCCCHHC
GSLPTLSTIRYAAGLGLRYYTPVGPIRLDVGVPIDRQPGDSHYGVYISIGQAF
CCCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MRSVSTACALILTTFAAQILAATDLRADDDPTFFNQFFSWFNPNGQSDQNDQKKPLFDGV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PYEVTITVSGDDSLTSTLTDASNLKSLQEVTPSGVAGLIRRAIADRPRLRAALYGQGYFA
CEEEEEEECCCCCHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCEEC
GVSQIKVAGFPPDQLEAFAAVEKARKAGPVPVTIHVVTGQRFNYGKLTILNAASKQPLKD
CCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHH
MPSTHDLRLDPGQPASADQVFRAEQAIVDHLRNEGHPFAKIASRDIVADHATRELDMTFT
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCEEEEEEE
VDPGPSGRFGHIEVKGTQDLDRNFVERQIDIERGEPYSPDRLARIRRRLVALPAVGAVRI
ECCCCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEH
QEAQQLDSHGELPVTIDVIERLPHFVGANAKYSNTEGGAVNVFWGDRNLWGHGESLRIDG
HHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECC
YGSWYGGALYGVPNANRLGYKLAATFNKPDIITPQDELIAQAAILREVTSAYVREAATFQ
CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GGVRHRFSDELSLQIGADIEYSRSQDNPLYPRNDFTAGVPFDLLYDTTDSPLDPSRGMRI
CCHHHCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEE
TATLEPFASLGQNGPGPVMGKAVVSAYHALDEDRRYIVAGRVGAGSIVGANLYAVPPQRR
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCEEECCCCCE
FYIGGGGTLRGFGYQQASPHDGYNNLIGGLSFFMASAELRARITDTIGIVPFIDAGEAFR
EEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEHHHCCCEEEECCCCHHC
GSLPTLSTIRYAAGLGLRYYTPVGPIRLDVGVPIDRQPGDSHYGVYISIGQAF
CCCCCHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]