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The map label for this gene is ydhP [H]

Identifier: 182678679

GI number: 182678679

Start: 1926796

End: 1927980

Strand: Reverse

Name: ydhP [H]

Synonym: Bind_1706

Alternate gene names: 182678679

Gene position: 1927980-1926796 (Counterclockwise)

Preceding gene: 182678680

Following gene: 182678678

Centisome position: 46.23

GC content: 57.72

Gene sequence:

>1185_bases
ATGCCCCTCGCTCTTTTCGCGCTGGCCTTGGCTTCCTTTGGTATTGGGACGAGTGAATTCGTCATCATGGGCATCTTGCC
GGAAATCGCCCGTGATCTCACGGTGACGATTCCGCAAGCCGGTCTCCTGGTGACTGCCTATGCCCTGACGGTGACATTCG
CGGGGCCGGTCGTTGCTCTGCTGGCGGCTCGTCTGCCGCAAAAAACCGCCTTGCTCGGGCTTCTCTGCCTGTTTCTCCTC
GGCAATCTTTTTTGTGCCCTGGCGCCGCAATTTTCTCTTCTCTTGATAGCGCGGATCTTCACGGCTCTCGCCCATGCGGC
CTTTTACGGAAATGGCGTCGTCGTCGCCGCGAGCTTGGTTCCGCCCCATCGCCGCAGTCAGGCGATCGCCTTGATGTTTT
CAGGAATGACATTGGCCAATATTATTGGTGTCCCGGTCGGCACGATGATCGGCCTCGCACAAGGTTGGCGTGCGACATTC
TGGGCGATTATTCCTTTCCTTGGTGTGGCCGGCATTGCCTTGGCCATTCTGTTGCCGAGGAAAGGTCAGGAGAGAGCGGC
TGGCCGTTTGGTCGATGAATTGATCGTCTTGCGCCGGCCGCAGGTCCTGCTGACACTTTTAGCCAGTGTCTTTATCGCCG
CGAGCCTGTTCTGTGTCTTGACCTATATTTCGCCTCTGCTCGCCACCGTGACGGGCATGGATGAAACCCAGATTTCGAGC
GCGCTTCTGCTCTTTGGTGGTGGAACCTTTTTCGGCATTTTTGTCGGTGGCCGGCTGGCGGATTGGCGCCAAATGACGAC
GATCGTCGGGACATTTGTCGTACTCGGTGCCCTTTATGCGGTCTTCGCGTTTTCTGCTACTTCTATCCCGTCCACCTATC
TGACCATTTTTCTGCTGGGTTTCGTCAGTTTCGCGAATGGCCCTGGCATGCAGGCGCGGGTTATCGACAAGGCAAGCGAG
GCACCCAATATTGGAGCCTCATTGATTCACAGTTCCTATAATTTTGGCAATGGCGCCGGGGCTTGGCTGGGTGGCGCGGC
CTTGGCCTCGGGCATGAGCTATGGACATTTGCCCTGGCTTTCCGTCGGCTTGGTGGTGGCAGCCTTGGCGACGCTCGGCA
TCGCCCATGAACTCGAACGCAATGCCGAGAATGCCGGAGGTCTCGATCCGGAGGCCTTGTCCTGA

Upstream 100 bases:

>100_bases
TCAAAAATGCATAAGGAACACATTGACCTGAAGATGCATCGGATCCGCTCCCGAACCTCGGTCTGGTGCCGTGTCGTGCC
ACCCTTCCTTGAGATTATAC

Downstream 100 bases:

>100_bases
GGCACAGCCTCAGGTCCAGCTGGCCCACTCTCATCGAGAGGGACTGGCAGGACATCGGAACGGGAATCGTGCAGAAACGC
TCAACGGCGTGGAGCAAAAA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPLALFALALASFGIGTSEFVIMGILPEIARDLTVTIPQAGLLVTAYALTVTFAGPVVALLAARLPQKTALLGLLCLFLL
GNLFCALAPQFSLLLIARIFTALAHAAFYGNGVVVAASLVPPHRRSQAIALMFSGMTLANIIGVPVGTMIGLAQGWRATF
WAIIPFLGVAGIALAILLPRKGQERAAGRLVDELIVLRRPQVLLTLLASVFIAASLFCVLTYISPLLATVTGMDETQISS
ALLLFGGGTFFGIFVGGRLADWRQMTTIVGTFVVLGALYAVFAFSATSIPSTYLTIFLLGFVSFANGPGMQARVIDKASE
APNIGASLIHSSYNFGNGAGAWLGGAALASGMSYGHLPWLSVGLVVAALATLGIAHELERNAENAGGLDPEALS

Sequences:

>Translated_394_residues
MPLALFALALASFGIGTSEFVIMGILPEIARDLTVTIPQAGLLVTAYALTVTFAGPVVALLAARLPQKTALLGLLCLFLL
GNLFCALAPQFSLLLIARIFTALAHAAFYGNGVVVAASLVPPHRRSQAIALMFSGMTLANIIGVPVGTMIGLAQGWRATF
WAIIPFLGVAGIALAILLPRKGQERAAGRLVDELIVLRRPQVLLTLLASVFIAASLFCVLTYISPLLATVTGMDETQISS
ALLLFGGGTFFGIFVGGRLADWRQMTTIVGTFVVLGALYAVFAFSATSIPSTYLTIFLLGFVSFANGPGMQARVIDKASE
APNIGASLIHSSYNFGNGAGAWLGGAALASGMSYGHLPWLSVGLVVAALATLGIAHELERNAENAGGLDPEALS
>Mature_393_residues
PLALFALALASFGIGTSEFVIMGILPEIARDLTVTIPQAGLLVTAYALTVTFAGPVVALLAARLPQKTALLGLLCLFLLG
NLFCALAPQFSLLLIARIFTALAHAAFYGNGVVVAASLVPPHRRSQAIALMFSGMTLANIIGVPVGTMIGLAQGWRATFW
AIIPFLGVAGIALAILLPRKGQERAAGRLVDELIVLRRPQVLLTLLASVFIAASLFCVLTYISPLLATVTGMDETQISSA
LLLFGGGTFFGIFVGGRLADWRQMTTIVGTFVVLGALYAVFAFSATSIPSTYLTIFLLGFVSFANGPGMQARVIDKASEA
PNIGASLIHSSYNFGNGAGAWLGGAALASGMSYGHLPWLSVGLVVAALATLGIAHELERNAENAGGLDPEALS

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=380, Percent_Identity=40, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=30.2872062663185, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787808, Length=348, Percent_Identity=28.735632183908, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI145693198, Length=250, Percent_Identity=28.4, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082231, Length=178, Percent_Identity=25.8426966292135, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40975; Mature: 40844

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLALFALALASFGIGTSEFVIMGILPEIARDLTVTIPQAGLLVTAYALTVTFAGPVVAL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
LAARLPQKTALLGLLCLFLLGNLFCALAPQFSLLLIARIFTALAHAAFYGNGVVVAASLV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PPHRRSQAIALMFSGMTLANIIGVPVGTMIGLAQGWRATFWAIIPFLGVAGIALAILLPR
CCCCCCCEEHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
KGQERAAGRLVDELIVLRRPQVLLTLLASVFIAASLFCVLTYISPLLATVTGMDETQISS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALLLFGGGTFFGIFVGGRLADWRQMTTIVGTFVVLGALYAVFAFSATSIPSTYLTIFLLG
HHHEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FVSFANGPGMQARVIDKASEAPNIGASLIHSSYNFGNGAGAWLGGAALASGMSYGHLPWL
HHHHCCCCCCEEHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
SVGLVVAALATLGIAHELERNAENAGGLDPEALS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLALFALALASFGIGTSEFVIMGILPEIARDLTVTIPQAGLLVTAYALTVTFAGPVVAL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
LAARLPQKTALLGLLCLFLLGNLFCALAPQFSLLLIARIFTALAHAAFYGNGVVVAASLV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PPHRRSQAIALMFSGMTLANIIGVPVGTMIGLAQGWRATFWAIIPFLGVAGIALAILLPR
CCCCCCCEEHHHCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
KGQERAAGRLVDELIVLRRPQVLLTLLASVFIAASLFCVLTYISPLLATVTGMDETQISS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALLLFGGGTFFGIFVGGRLADWRQMTTIVGTFVVLGALYAVFAFSATSIPSTYLTIFLLG
HHHEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FVSFANGPGMQARVIDKASEAPNIGASLIHSSYNFGNGAGAWLGGAALASGMSYGHLPWL
HHHHCCCCCCEEHHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH
SVGLVVAALATLGIAHELERNAENAGGLDPEALS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]