| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678612
Identifier: 182678612
GI number: 182678612
Start: 1851781
End: 1852611
Strand: Reverse
Name: 182678612
Synonym: Bind_1638
Alternate gene names: NA
Gene position: 1852611-1851781 (Counterclockwise)
Preceding gene: 182678613
Following gene: 182678609
Centisome position: 44.43
GC content: 61.97
Gene sequence:
>831_bases ATGGCCGAACCCAAGAAGAAATCGCCGGCACGAAAGAAAGACGGCGCGCGGAAATCCGGCGGCCAAGCGAAGAAGGCCAA GGCTCCCGGGCGCATGAAACGCTATGCCGGTTTCGCGGCTTGCGCCCTGTCCGTGGCGGCCATCGGCGGGATTCTCGTCA ATGCCCTGATTTTGCAGAAAAGCCGGCATCCGGCCCCGCTCTTCAGCCAAGCGACGCCAGTCAAACGCGCCCCCGTCGAA TCGCCGGCGCCACGCGCTCATTCCGTAGCAGTGCCTGCGAGCGAGCCGACCCCGCCCGCGCCACCGCCGGAACGGGCCAT GCTCGACAAGCTCGCGGCTAAGGAGGCCAGTCCCTCCGGATCAGCCGCCCCTCCGGCTCCGATGGCAAGCAAACCCAAGG ATGAGATTGCCCTTCTTCTCATGGGCAAACAGCCCGAGGCCAAGAAGCCGGCCGCGTCGCAAGCCGTGAAACATGAGGTC CCAGCCAGTCATGAGAGCGCGCACAGCGTTATGGCGCCGAAGGCGGAAGCTGCCAAACCAGTGCACAAGGCTCCGGAAGC AGCACGCCAAGAAGGAGTACATCAAGAAATAGCCCACCAAGAACCAGTCCATAAGGAGCAAGCCAAACAGGATCCGAGCA AGTCGATCTATGCGGCTCAACGCGCGCTGGTAAAGCTCGGCTTCGTTCTCAAGCCTGATGGTGTGGCGAACGAAAGCACA AAACAGGCGATCGCCCGTTATGAGCAGGACCACAAATTGCCCGTGCATGGAGTGGTGACACCCCAATTGCTGCATCGGCT CGAGGTGGAAGCCGGCATCAAGGCGCAATGA
Upstream 100 bases:
>100_bases CAAACCCGTCGTGGCGTGCCTGCGGAAATTTCGGTGCTCAAGGAAGCAAAGGTGAAGAAAATTGCGTGAAGCCCTGGCAG CCACTGATTATGATTTCGTG
Downstream 100 bases:
>100_bases TTGGCGCGCTGAGAAGAGATCCACTCTCTTCTCGCCCGAAAAGCTTCAGCCCAAGCGTGGCACTCTTCAATCGGTAACAG GACAACTCCAAAAGGGCCGC
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAEPKKKSPARKKDGARKSGGQAKKAKAPGRMKRYAGFAACALSVAAIGGILVNALILQKSRHPAPLFSQATPVKRAPVE SPAPRAHSVAVPASEPTPPAPPPERAMLDKLAAKEASPSGSAAPPAPMASKPKDEIALLLMGKQPEAKKPAASQAVKHEV PASHESAHSVMAPKAEAAKPVHKAPEAARQEGVHQEIAHQEPVHKEQAKQDPSKSIYAAQRALVKLGFVLKPDGVANEST KQAIARYEQDHKLPVHGVVTPQLLHRLEVEAGIKAQ
Sequences:
>Translated_276_residues MAEPKKKSPARKKDGARKSGGQAKKAKAPGRMKRYAGFAACALSVAAIGGILVNALILQKSRHPAPLFSQATPVKRAPVE SPAPRAHSVAVPASEPTPPAPPPERAMLDKLAAKEASPSGSAAPPAPMASKPKDEIALLLMGKQPEAKKPAASQAVKHEV PASHESAHSVMAPKAEAAKPVHKAPEAARQEGVHQEIAHQEPVHKEQAKQDPSKSIYAAQRALVKLGFVLKPDGVANEST KQAIARYEQDHKLPVHGVVTPQLLHRLEVEAGIKAQ >Mature_275_residues AEPKKKSPARKKDGARKSGGQAKKAKAPGRMKRYAGFAACALSVAAIGGILVNALILQKSRHPAPLFSQATPVKRAPVES PAPRAHSVAVPASEPTPPAPPPERAMLDKLAAKEASPSGSAAPPAPMASKPKDEIALLLMGKQPEAKKPAASQAVKHEVP ASHESAHSVMAPKAEAAKPVHKAPEAARQEGVHQEIAHQEPVHKEQAKQDPSKSIYAAQRALVKLGFVLKPDGVANESTK QAIARYEQDHKLPVHGVVTPQLLHRLEVEAGIKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29072; Mature: 28941
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPKKKSPARKKDGARKSGGQAKKAKAPGRMKRYAGFAACALSVAAIGGILVNALILQK CCCCCCCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRHPAPLFSQATPVKRAPVESPAPRAHSVAVPASEPTPPAPPPERAMLDKLAAKEASPSG CCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC SAAPPAPMASKPKDEIALLLMGKQPEAKKPAASQAVKHEVPASHESAHSVMAPKAEAAKP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHCH VHKAPEAARQEGVHQEIAHQEPVHKEQAKQDPSKSIYAAQRALVKLGFVLKPDGVANEST HHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCHHH KQAIARYEQDHKLPVHGVVTPQLLHRLEVEAGIKAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure AEPKKKSPARKKDGARKSGGQAKKAKAPGRMKRYAGFAACALSVAAIGGILVNALILQK CCCCCCCCCHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRHPAPLFSQATPVKRAPVESPAPRAHSVAVPASEPTPPAPPPERAMLDKLAAKEASPSG CCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC SAAPPAPMASKPKDEIALLLMGKQPEAKKPAASQAVKHEVPASHESAHSVMAPKAEAAKP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHCH VHKAPEAARQEGVHQEIAHQEPVHKEQAKQDPSKSIYAAQRALVKLGFVLKPDGVANEST HHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCEECCCCCCCHHH KQAIARYEQDHKLPVHGVVTPQLLHRLEVEAGIKAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA