| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678541
Identifier: 182678541
GI number: 182678541
Start: 1767488
End: 1768183
Strand: Direct
Name: 182678541
Synonym: Bind_1566
Alternate gene names: NA
Gene position: 1767488-1768183 (Clockwise)
Preceding gene: 182678540
Following gene: 182678545
Centisome position: 42.38
GC content: 52.01
Gene sequence:
>696_bases ATGAGTAGCAGATCAAGCATGCTGGATCAGCTTGTTGCAAAGGTTACCAGCTTTGAGTTGGCCCGTCCGCTTAGGATCGC GATAGATGGTCGAACCGCCTCAGGTAAGACGACGTTCGCTGATGAGCTTGCGCAACGTATTCGGATCCAGAACAGAGAGA TCATCCGCACGTCGATCGACGAATTTCATCTGCCTAAAGCGGATCGCTATGCGCGCGGACGACTTTCCGCTGAAGGCTAT TATCATGATGGCTATGATCTGCCTGCTGTCGTAGCTTTTCTTCTTCGTCCGCTGGGGCCTGGCGGCGATCGTCTTTACCG AACGGCATCCTTCGACCTTGTGAAAGATCAGCCCGTCGAGCAGGAACCCAAGTTGGCGCCAGAGGATGCTATCCTGATCG TTGATGGCACCTTTCTTCAAAGACCGGAGCTGGTTGCTGAATGGGATCTGGTGATTTTCCTTGAATCATCGGAGGAGGTT TCTGAAAGCAGAGGGATCAACCGGGACCGAGAGCTTTTGGGCGGTGAGGATTCCGCTCGCCGTCTTTATGCTGAGCGTTA TCTGCCAGCCTTCGAACAATATGAACGTCTTTGCAGTCCCAAAGTGACCGCGGACGCAATTGTCAACAATGACGATTTCG AATTTCCAATATTGTCAATTCCGCGTGATAGCCGACTGGCGGTCAATTTTCAGTAG
Upstream 100 bases:
>100_bases TGGTATTTGCGCTATCCGCTGAGCTACGGGAATGTCGAGGACATACGATGGCTACACGATTTGTTCATGGCGTCGCCGTC GACGCTAGGAGAAATCGCTG
Downstream 100 bases:
>100_bases GATGGCTCAGCGTTAGTTTTTTGAAGAGCGTCCTTATAAGCAACGATGGCAGCGCCAAACCGATCTCAAGAGCATCCACC GTCAGTTCATGCCCGATGGA
Product: uridine kinase
Products: ADP; UMP
Alternate protein names: Phosphoribulokinase / Uridine Kinase Family; Kinase; Phosphoribulokinase/Uridine Kinase; Pantothenate Kinase Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSSRSSMLDQLVAKVTSFELARPLRIAIDGRTASGKTTFADELAQRIRIQNREIIRTSIDEFHLPKADRYARGRLSAEGY YHDGYDLPAVVAFLLRPLGPGGDRLYRTASFDLVKDQPVEQEPKLAPEDAILIVDGTFLQRPELVAEWDLVIFLESSEEV SESRGINRDRELLGGEDSARRLYAERYLPAFEQYERLCSPKVTADAIVNNDDFEFPILSIPRDSRLAVNFQ
Sequences:
>Translated_231_residues MSSRSSMLDQLVAKVTSFELARPLRIAIDGRTASGKTTFADELAQRIRIQNREIIRTSIDEFHLPKADRYARGRLSAEGY YHDGYDLPAVVAFLLRPLGPGGDRLYRTASFDLVKDQPVEQEPKLAPEDAILIVDGTFLQRPELVAEWDLVIFLESSEEV SESRGINRDRELLGGEDSARRLYAERYLPAFEQYERLCSPKVTADAIVNNDDFEFPILSIPRDSRLAVNFQ >Mature_230_residues SSRSSMLDQLVAKVTSFELARPLRIAIDGRTASGKTTFADELAQRIRIQNREIIRTSIDEFHLPKADRYARGRLSAEGYY HDGYDLPAVVAFLLRPLGPGGDRLYRTASFDLVKDQPVEQEPKLAPEDAILIVDGTFLQRPELVAEWDLVIFLESSEEVS ESRGINRDRELLGGEDSARRLYAERYLPAFEQYERLCSPKVTADAIVNNDDFEFPILSIPRDSRLAVNFQ
Specific function: Unknown
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.48
Molecular weight: Translated: 26195; Mature: 26064
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRSSMLDQLVAKVTSFELARPLRIAIDGRTASGKTTFADELAQRIRIQNREIIRTSID CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH EFHLPKADRYARGRLSAEGYYHDGYDLPAVVAFLLRPLGPGGDRLYRTASFDLVKDQPVE HHCCCCCCHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCC QEPKLAPEDAILIVDGTFLQRPELVAEWDLVIFLESSEEVSESRGINRDRELLGGEDSAR CCCCCCCCCEEEEEECCCCCCCCCEEECEEEEEEECCHHHHHHCCCCHHHHHHCCCHHHH RLYAERYLPAFEQYERLCSPKVTADAIVNNDDFEFPILSIPRDSRLAVNFQ HHHHHHCCCHHHHHHHHCCCCCCHHHEECCCCCCCCEEECCCCCEEEEECC >Mature Secondary Structure SSRSSMLDQLVAKVTSFELARPLRIAIDGRTASGKTTFADELAQRIRIQNREIIRTSID CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH EFHLPKADRYARGRLSAEGYYHDGYDLPAVVAFLLRPLGPGGDRLYRTASFDLVKDQPVE HHCCCCCCHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCCC QEPKLAPEDAILIVDGTFLQRPELVAEWDLVIFLESSEEVSESRGINRDRELLGGEDSAR CCCCCCCCCEEEEEECCCCCCCCCEEECEEEEEEECCHHHHHHCCCCHHHHHHCCCHHHH RLYAERYLPAFEQYERLCSPKVTADAIVNNDDFEFPILSIPRDSRLAVNFQ HHHHHHCCCHHHHHHHHCCCCCCHHHEECCCCCCCCEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; uridine
Specific reaction: ATP + uridine = ADP + UMP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA