| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is metG [H]
Identifier: 182678510
GI number: 182678510
Start: 1737398
End: 1738990
Strand: Reverse
Name: metG [H]
Synonym: Bind_1534
Alternate gene names: 182678510
Gene position: 1738990-1737398 (Counterclockwise)
Preceding gene: 182678511
Following gene: 182678509
Centisome position: 41.7
GC content: 58.51
Gene sequence:
>1593_bases GTGTTCGACCAGCCGGATCGGGACAAACTCAAGATCATGACCATGGCCGGCCGCCCCCGCTTCTATCTCACGACCGCCAT TCCCTATGCCAATGGCGCTCCCCATATCGGCCATGCCTATGAGCGGCTCGCCTGCGACGCGATCACCCGTTTCAAGCGGC TCGATGGCTATGACGTGCTGTTCGTGACCGGCATGGACGAGCACGGCCAAAAAATGCAGCAGACGGCCGCCCGCGACCAT ATCACACCGCAGGAACTGGCCGACCGCACGGCCGCTCAATTCGCTGCTATGGGGCTCGCGCTTGACGCACCGACCGATGA TGTCGTGCGCACGACGGAGCCACGCCATCATGTAGCGGCGCAAGAGATCTGGAACCGTATGGCCGCCAATGGCGATATTT ATCTCTCCAAATATCCCGGCTGGTATTCGGTCCGCGATGAGGCTTTCTTCGACGAGGGTGAACTGACCGAGGGGCCCAAT GGCACCAAGCTCGCTCCAACCGGCGCGCCGGTCGAATGGGTCGAGGAAGAGAGCTATTATTTCAAGCTTTCAGCCTATCA AGAGCGCTTGCTCGCGCATTATCAGGCCCATCCGGATTTCATCACACCCGAGAAATATCGCAACGAGATCGTCTCTTTCG TCGAGCGCGGCTTGACCGATCTTTCGATCAGCCGCTCGACCTTCGACTGGGGCATTCCCGTGCCGGGCGATGCCAAACAT GTCATGTATGTCTGGGTCGATGCCCTGACCAATTATATTACCGCCACGGGTTTCCCTGATGCGGAGGCGCCGCGCGCGGT TTTCTGGCCGGCCGATGCGCATGTGATCGGCAAGGATATCACCCGCTTCCACGCGATTTACTGGCCGGCGTTCCTGATGT CGGCTGGAATTGCTCTGCCAAAACAGATCGTCGTGCATGGATTTCTGTTCAACCGCGGCGAGAAAATGTCGAAATCAGTG GGCAATGTCATCGACCCGCTGACTTTGATCGAGACTTATGGCCTCGACCCATTCCGCTATTTCTTCCTCCGCGAAGTGCC GTTCGGCCAGGATGGCAATTATTCGCATGAAGCGATCGTCAACCGCACCAATGCCGATCTCGCCAATGACCTTGGCAATC TGGCGCAGCGCTCGCTCTCCATGCTCGCCAAAAATTGCGGGGGTAAGGTGCCGCAGCCCGGCGCCTTCAGCGAGGCCGAC AAAGCGATCCTCGACCTCTCCCGCGCCCTGGTCGAAAAGAGCCGGGATCTGATGCAGGATTTCTCGCTGCATCTTATCTT AGGCGAAATCTGGCGCGTCGTTGGCGAGGCCAATCGCTATTTCGCGGGCGAAGAGCCGTGGATCAAGCGCAAGACCGATC CCGCTCGCATGGAGACCATTCTCTATGTGACAGCAGAAGTGTTGCGGCGGGTCGCTATTCTGACTCAGCCTTTCATTCCG CAATCGGCCTCGAAATTGCTCGATTCTCTGGGTGTCGCGGCGGAAGCTCGCCTTTTCATCCATGTGGAAGAAGGCCCTGA TCTGCCCCCCGGCACGGTTTTGCCGACACCTGTGCCGATCTTTCCCCGTATCGAAACGGAAGCCAAGTCATAG
Upstream 100 bases:
>100_bases TCATGGCCTTTGTGACTGGAAAGCTTAAGGCAAGGATTATGCGTTAAGATTAGGATAAAGCGTATTTTCTTATTCGACCG AATGAGATGATACATCGCTG
Downstream 100 bases:
>100_bases ACATGCTGATCGATACCCATTGCCATCTTGATTTTCCCGATTTCGCGGCCGAGCGCGACGAGATTGTCGGCCGTGCGCGG GCGGCGGGCCTTGGGCGTAT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MFDQPDRDKLKIMTMAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQTAARDH ITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIYLSKYPGWYSVRDEAFFDEGELTEGPN GTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHYQAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKH VMYVWVDALTNYITATGFPDAEAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRGEKMSKSV GNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQRSLSMLAKNCGGKVPQPGAFSEAD KAILDLSRALVEKSRDLMQDFSLHLILGEIWRVVGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIP QSASKLLDSLGVAAEARLFIHVEEGPDLPPGTVLPTPVPIFPRIETEAKS
Sequences:
>Translated_530_residues MFDQPDRDKLKIMTMAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQTAARDH ITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIYLSKYPGWYSVRDEAFFDEGELTEGPN GTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHYQAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKH VMYVWVDALTNYITATGFPDAEAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRGEKMSKSV GNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQRSLSMLAKNCGGKVPQPGAFSEAD KAILDLSRALVEKSRDLMQDFSLHLILGEIWRVVGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIP QSASKLLDSLGVAAEARLFIHVEEGPDLPPGTVLPTPVPIFPRIETEAKS >Mature_530_residues MFDQPDRDKLKIMTMAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVLFVTGMDEHGQKMQQTAARDH ITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAAQEIWNRMAANGDIYLSKYPGWYSVRDEAFFDEGELTEGPN GTKLAPTGAPVEWVEEESYYFKLSAYQERLLAHYQAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKH VMYVWVDALTNYITATGFPDAEAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALPKQIVVHGFLFNRGEKMSKSV GNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIVNRTNADLANDLGNLAQRSLSMLAKNCGGKVPQPGAFSEAD KAILDLSRALVEKSRDLMQDFSLHLILGEIWRVVGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIP QSASKLLDSLGVAAEARLFIHVEEGPDLPPGTVLPTPVPIFPRIETEAKS
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=505, Percent_Identity=39.4059405940594, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI14043022, Length=560, Percent_Identity=23.3928571428571, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1788432, Length=508, Percent_Identity=25.7874015748031, Blast_Score=169, Evalue=5e-43, Organism=Caenorhabditis elegans, GI212645096, Length=497, Percent_Identity=36.4185110663984, Blast_Score=333, Evalue=1e-91, Organism=Caenorhabditis elegans, GI71992781, Length=391, Percent_Identity=35.5498721227622, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI17540794, Length=531, Percent_Identity=23.728813559322, Blast_Score=132, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6321610, Length=544, Percent_Identity=32.3529411764706, Blast_Score=287, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6321704, Length=569, Percent_Identity=22.4956063268893, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI21358483, Length=509, Percent_Identity=37.1316306483301, Blast_Score=324, Evalue=7e-89, Organism=Drosophila melanogaster, GI24655311, Length=575, Percent_Identity=26.0869565217391, Blast_Score=140, Evalue=3e-33,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 59408; Mature: 59408
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDQPDRDKLKIMTMAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVL CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE FVTGMDEHGQKMQQTAARDHITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAA EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHCCCCCHHHHHH QEIWNRMAANGDIYLSKYPGWYSVRDEAFFDEGELTEGPNGTKLAPTGAPVEWVEEESYY HHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCHHEECCCCEE FKLSAYQERLLAHYQAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKH EEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCE VMYVWVDALTNYITATGFPDAEAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALP EHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC KQIVVHGFLFNRGEKMSKSVGNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH NRTNADLANDLGNLAQRSLSMLAKNCGGKVPQPGAFSEADKAILDLSRALVEKSRDLMQD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FSLHLILGEIWRVVGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QSASKLLDSLGVAAEARLFIHVEEGPDLPPGTVLPTPVPIFPRIETEAKS HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFDQPDRDKLKIMTMAGRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYDVL CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE FVTGMDEHGQKMQQTAARDHITPQELADRTAAQFAAMGLALDAPTDDVVRTTEPRHHVAA EEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCHHCCCCCHHHHHH QEIWNRMAANGDIYLSKYPGWYSVRDEAFFDEGELTEGPNGTKLAPTGAPVEWVEEESYY HHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCCCCCCCCEECCCCCCHHEECCCCEE FKLSAYQERLLAHYQAHPDFITPEKYRNEIVSFVERGLTDLSISRSTFDWGIPVPGDAKH EEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCE VMYVWVDALTNYITATGFPDAEAPRAVFWPADAHVIGKDITRFHAIYWPAFLMSAGIALP EHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC KQIVVHGFLFNRGEKMSKSVGNVIDPLTLIETYGLDPFRYFFLREVPFGQDGNYSHEAIV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHH NRTNADLANDLGNLAQRSLSMLAKNCGGKVPQPGAFSEADKAILDLSRALVEKSRDLMQD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FSLHLILGEIWRVVGEANRYFAGEEPWIKRKTDPARMETILYVTAEVLRRVAILTQPFIP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC QSASKLLDSLGVAAEARLFIHVEEGPDLPPGTVLPTPVPIFPRIETEAKS HHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]