| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678413
Identifier: 182678413
GI number: 182678413
Start: 1640590
End: 1641513
Strand: Direct
Name: 182678413
Synonym: Bind_1430
Alternate gene names: NA
Gene position: 1640590-1641513 (Clockwise)
Preceding gene: 182678412
Following gene: 182678414
Centisome position: 39.34
GC content: 60.71
Gene sequence:
>924_bases ATGCCGAAACCGATCTTCAAACCGTCCCAGACACCGATGCCGCAGCGGGCCGGCGTCGGCCTGAAGGCCGAGCACTATCG GACGATCATGGAGACCTCACCCGATATCGGTTTCTTCGAGGTCCATGCCGAGAATTATATGGGCGCGGGTGGGTCGCCGC ATCGCTACCTTTCCGTCATCCGCGATCGCTATCCGCTGTCGCTCCACGGTGTCGGCCTGTCGATCGGCGCGGATCGCCCT TTGGACAAGGATCATCTTGCGCGCCTGAAGCAACTGATCGATCTTTATTGCCCGGCGCTCTTCTCAGAGCATCTCGCCTG GTCCAGCCACGATGTTGGCTTCCTGAACGACTTGCTTCCTCTGCCTTACACGAACGAGACACTTGCGCGCGTCGTGGAGC ATGTCGATCAGGTGCAGGACTTTCTCGGGCGCCAGATGCTGCTGGAGAATCCGTCCACCTATCTGGCCTTCGCCGAAAGT ACCTGGGCGGAGACCGACTTCATCGCCGAGATCGTCCGGCGGACAGGCTGCGGTCTTCTGCTCGACGTGAACAATGTCCA TGTCGCCTGCACCAATCAGGGCTGGGATCCGATCGCTTATCTCGACGCCTATCCGCTTCCTGATGTGCAGGAGATCCATC TGGCCGGCTTCGCGCCCGATGCCGATGAAGAAGGACGCCCCCTGCTGATCGATGCCCACGACCGACCGGTCTCGGAGATT GTCTGGGGTCTGTTCGCCCATACGACCGAGCGCATCGGCCCGGTTCCGACCCTGATCGAGTGGGACGCCAACGTGCCCGA TTGGCCAATGCTGAAGGCCGAGGCGGAACGCGCCGAGCTTATCATGTCCGACATCGACTGTATGCACCGGCGTGTACCTG TTGTTGTCCACGCACACTCATTCCAGAGAGGTGACCACCCATGA
Upstream 100 bases:
>100_bases CGAACGGAACGGGCAGCCTCAAGCCCAAGGCCTGATCGACCGCTCGGCCGGGCCACGAAGGCCCGGCCATTCCTTCCCTG CATCGACCGAAGTGAACGCC
Downstream 100 bases:
>100_bases TTGGCTCGATTGGCAGTTCGGCTTCAGGTCTGGAAGGCTCCGAACATGCTGCTGGCATGGTGAGATCTGCCGACCGACAG GCTGACTTCACCAGGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPKPIFKPSQTPMPQRAGVGLKAEHYRTIMETSPDIGFFEVHAENYMGAGGSPHRYLSVIRDRYPLSLHGVGLSIGADRP LDKDHLARLKQLIDLYCPALFSEHLAWSSHDVGFLNDLLPLPYTNETLARVVEHVDQVQDFLGRQMLLENPSTYLAFAES TWAETDFIAEIVRRTGCGLLLDVNNVHVACTNQGWDPIAYLDAYPLPDVQEIHLAGFAPDADEEGRPLLIDAHDRPVSEI VWGLFAHTTERIGPVPTLIEWDANVPDWPMLKAEAERAELIMSDIDCMHRRVPVVVHAHSFQRGDHP
Sequences:
>Translated_307_residues MPKPIFKPSQTPMPQRAGVGLKAEHYRTIMETSPDIGFFEVHAENYMGAGGSPHRYLSVIRDRYPLSLHGVGLSIGADRP LDKDHLARLKQLIDLYCPALFSEHLAWSSHDVGFLNDLLPLPYTNETLARVVEHVDQVQDFLGRQMLLENPSTYLAFAES TWAETDFIAEIVRRTGCGLLLDVNNVHVACTNQGWDPIAYLDAYPLPDVQEIHLAGFAPDADEEGRPLLIDAHDRPVSEI VWGLFAHTTERIGPVPTLIEWDANVPDWPMLKAEAERAELIMSDIDCMHRRVPVVVHAHSFQRGDHP >Mature_306_residues PKPIFKPSQTPMPQRAGVGLKAEHYRTIMETSPDIGFFEVHAENYMGAGGSPHRYLSVIRDRYPLSLHGVGLSIGADRPL DKDHLARLKQLIDLYCPALFSEHLAWSSHDVGFLNDLLPLPYTNETLARVVEHVDQVQDFLGRQMLLENPSTYLAFAEST WAETDFIAEIVRRTGCGLLLDVNNVHVACTNQGWDPIAYLDAYPLPDVQEIHLAGFAPDADEEGRPLLIDAHDRPVSEIV WGLFAHTTERIGPVPTLIEWDANVPDWPMLKAEAERAELIMSDIDCMHRRVPVVVHAHSFQRGDHP
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 34490; Mature: 34358
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPIFKPSQTPMPQRAGVGLKAEHYRTIMETSPDIGFFEVHAENYMGAGGSPHRYLSVI CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH RDRYPLSLHGVGLSIGADRPLDKDHLARLKQLIDLYCPALFSEHLAWSSHDVGFLNDLLP HHCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC LPYTNETLARVVEHVDQVQDFLGRQMLLENPSTYLAFAESTWAETDFIAEIVRRTGCGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEE LDVNNVHVACTNQGWDPIAYLDAYPLPDVQEIHLAGFAPDADEEGRPLLIDAHDRPVSEI EECCCEEEEEECCCCCCEEEECCCCCCCHHHEEEECCCCCCCCCCCEEEEECCCCCHHHH VWGLFAHTTERIGPVPTLIEWDANVPDWPMLKAEAERAELIMSDIDCMHRRVPVVVHAHS HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC FQRGDHP CCCCCCC >Mature Secondary Structure PKPIFKPSQTPMPQRAGVGLKAEHYRTIMETSPDIGFFEVHAENYMGAGGSPHRYLSVI CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHH RDRYPLSLHGVGLSIGADRPLDKDHLARLKQLIDLYCPALFSEHLAWSSHDVGFLNDLLP HHCCCEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC LPYTNETLARVVEHVDQVQDFLGRQMLLENPSTYLAFAESTWAETDFIAEIVRRTGCGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEE LDVNNVHVACTNQGWDPIAYLDAYPLPDVQEIHLAGFAPDADEEGRPLLIDAHDRPVSEI EECCCEEEEEECCCCCCEEEECCCCCCCHHHEEEECCCCCCCCCCCEEEEECCCCCHHHH VWGLFAHTTERIGPVPTLIEWDANVPDWPMLKAEAERAELIMSDIDCMHRRVPVVVHAHS HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC FQRGDHP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA