| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678412
Identifier: 182678412
GI number: 182678412
Start: 1640192
End: 1640524
Strand: Direct
Name: 182678412
Synonym: Bind_1429
Alternate gene names: NA
Gene position: 1640192-1640524 (Clockwise)
Preceding gene: 182678410
Following gene: 182678413
Centisome position: 39.33
GC content: 64.86
Gene sequence:
>333_bases ATGTCCGATCGTCTGATGTCCAAGCTGGTCGCTGGCTCCTTCGCTGCCGCCTTCGGCACGCTCGCCGTTGCTCCCGCGAA TGCGCAGGAATTTACGGCGCAGCAGAAGAAAATCCAGGCCGAGAACACCGTGAAGGTGAAGTCCGGCAAGGTCGAGCCCT GCTTCGGCGTCGCGCTCAAAGGCCAGAACGACTGCTATGCGGGCGCCGGCACGACCTGCGCAGGCACCAGCACCGCCGAC TACCAGGGCAACGCCTTCAAGCTGGTGCCGACGGGCACCTGCACGACGATCTCCACGCCGAACGGAACGGGCAGCCTCAA GCCCAAGGCCTGA
Upstream 100 bases:
>100_bases TCGGAGAACGTCACAACGAACCTCCTAACAGGCGCGCCGAGACAGCCGCCATCCCGCCAGCAGCGAGCGATGCGCTGGCT GAACTTTTAGGAGAATCAAT
Downstream 100 bases:
>100_bases TCGACCGCTCGGCCGGGCCACGAAGGCCCGGCCATTCCTTCCCTGCATCGACCGAAGTGAACGCCATGCCGAAACCGATC TTCAAACCGTCCCAGACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSDRLMSKLVAGSFAAAFGTLAVAPANAQEFTAQQKKIQAENTVKVKSGKVEPCFGVALKGQNDCYAGAGTTCAGTSTAD YQGNAFKLVPTGTCTTISTPNGTGSLKPKA
Sequences:
>Translated_110_residues MSDRLMSKLVAGSFAAAFGTLAVAPANAQEFTAQQKKIQAENTVKVKSGKVEPCFGVALKGQNDCYAGAGTTCAGTSTAD YQGNAFKLVPTGTCTTISTPNGTGSLKPKA >Mature_109_residues SDRLMSKLVAGSFAAAFGTLAVAPANAQEFTAQQKKIQAENTVKVKSGKVEPCFGVALKGQNDCYAGAGTTCAGTSTADY QGNAFKLVPTGTCTTISTPNGTGSLKPKA
Specific function: Unknown
COG id: COG5572
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11167; Mature: 11036
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLMSKLVAGSFAAAFGTLAVAPANAQEFTAQQKKIQAENTVKVKSGKVEPCFGVALK CCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEE GQNDCYAGAGTTCAGTSTADYQGNAFKLVPTGTCTTISTPNGTGSLKPKA CCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SDRLMSKLVAGSFAAAFGTLAVAPANAQEFTAQQKKIQAENTVKVKSGKVEPCFGVALK CHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEE GQNDCYAGAGTTCAGTSTADYQGNAFKLVPTGTCTTISTPNGTGSLKPKA CCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA