Click here to switch to the map view.

The map label for this gene is 182678407

Identifier: 182678407

GI number: 182678407

Start: 1635708

End: 1636565

Strand: Direct

Name: 182678407

Synonym: Bind_1424

Alternate gene names: NA

Gene position: 1635708-1636565 (Clockwise)

Preceding gene: 182678406

Following gene: 182678409

Centisome position: 39.22

GC content: 41.72

Gene sequence:

>858_bases
ATGACCGCGTTCACTAGGAACAACGTGCAGAATGCGGCTGTTGAGTTTGTTAAGGAATTGAGACAGAGCAGGCTTAAGCA
ACTCTTACGAATTGAGCACGGCAATGTCGTTGATAACGCCAATACGGGCGGTTCTGTAGTTGAAGTGGCGAAATTAGAGG
AGCGCAGAGCCCAAATACAAGTGTGGTTTGACAAATACCTAGACGGCAAAAATTTGGTTTTTTGGGTAGGGTTTTATGCG
AACGATCAAAGCATTATAAAAAATATAATTAAATACTGCCCAGCTCGAATGCGAAATGGAAATGTTTTTAGAAAAAGTGA
TATGAAAATTTCAGGAAAAATTTCTTTCTTGAAGAAAAGGCCCGATGATCAAGACCTAAAATTTCCGATTCAAGAATATT
ATGATGATACAAATTATTTTGGGATATATGAAACGGAATCGTTCAACGTCGAGAAAGCTTTGAGATTTATTGAAACCGTT
GTTAGTTCTTTACCAGAGTTTGATTCAGGCGTTTCTAACGATATATTTCCCGAAAATAATAGAATACTAGTTGGGGAGCA
CCTTAGGATCGAGCGCAAGGCTGCTCTAGCTCGGGAATGTAAAAAACGCGATAGATACCGGTGCCAGATCTGCAACTTCC
ATTTCGTCGAACGGTATGGTTTGCTGGGCGAAAATTTCGCTGAAGCTCACCATAAGGTGCCGCTCTCCAAGCTTGACGGG
GAGGTTAAGAATTGTGTCGATGATCTTGTCACAGTTTGCGCAAACTGCCATCGAATGCTCCACAGGCTTGAGGGTAAACC
CACCGACATTGTTAAATTACGCCGCATTTTTAAGCACGTAGGTAAGTGTACAACGTGA

Upstream 100 bases:

>100_bases
CTTCTCATCAATGGTTAGGTAATTTGCCATTGAGGAACATTTGAATTTTGTTCCCAATTGGTCAATTATCACTACAATTC
AAGAGGTTAGGAGGGGAGCT

Downstream 100 bases:

>100_bases
TTGTTATGTGATGACGCGACCTCCAGTCCTAGCGGGGGGACCGTCCCCTATGACGAGGTCGTAAATGCACTTTGTGCCAT
GCCATCGGCTGTTCAAGTCG

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease; Restriction Endonuclease-Like Protein; 5-Methylcytosine-Specific Restriction A

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTAFTRNNVQNAAVEFVKELRQSRLKQLLRIEHGNVVDNANTGGSVVEVAKLEERRAQIQVWFDKYLDGKNLVFWVGFYA
NDQSIIKNIIKYCPARMRNGNVFRKSDMKISGKISFLKKRPDDQDLKFPIQEYYDDTNYFGIYETESFNVEKALRFIETV
VSSLPEFDSGVSNDIFPENNRILVGEHLRIERKAALARECKKRDRYRCQICNFHFVERYGLLGENFAEAHHKVPLSKLDG
EVKNCVDDLVTVCANCHRMLHRLEGKPTDIVKLRRIFKHVGKCTT

Sequences:

>Translated_285_residues
MTAFTRNNVQNAAVEFVKELRQSRLKQLLRIEHGNVVDNANTGGSVVEVAKLEERRAQIQVWFDKYLDGKNLVFWVGFYA
NDQSIIKNIIKYCPARMRNGNVFRKSDMKISGKISFLKKRPDDQDLKFPIQEYYDDTNYFGIYETESFNVEKALRFIETV
VSSLPEFDSGVSNDIFPENNRILVGEHLRIERKAALARECKKRDRYRCQICNFHFVERYGLLGENFAEAHHKVPLSKLDG
EVKNCVDDLVTVCANCHRMLHRLEGKPTDIVKLRRIFKHVGKCTT
>Mature_284_residues
TAFTRNNVQNAAVEFVKELRQSRLKQLLRIEHGNVVDNANTGGSVVEVAKLEERRAQIQVWFDKYLDGKNLVFWVGFYAN
DQSIIKNIIKYCPARMRNGNVFRKSDMKISGKISFLKKRPDDQDLKFPIQEYYDDTNYFGIYETESFNVEKALRFIETVV
SSLPEFDSGVSNDIFPENNRILVGEHLRIERKAALARECKKRDRYRCQICNFHFVERYGLLGENFAEAHHKVPLSKLDGE
VKNCVDDLVTVCANCHRMLHRLEGKPTDIVKLRRIFKHVGKCTT

Specific function: Unknown

COG id: COG3183

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33129; Mature: 32998

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFTRNNVQNAAVEFVKELRQSRLKQLLRIEHGNVVDNANTGGSVVEVAKLEERRAQIQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHH
VWFDKYLDGKNLVFWVGFYANDQSIIKNIIKYCPARMRNGNVFRKSDMKISGKISFLKKR
HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCHHCCCCCEEECCCCEEECCHHHHHCC
PDDQDLKFPIQEYYDDTNYFGIYETESFNVEKALRFIETVVSSLPEFDSGVSNDIFPENN
CCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RILVGEHLRIERKAALARECKKRDRYRCQICNFHFVERYGLLGENFAEAHHKVPLSKLDG
EEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHCCCHHHHCC
EVKNCVDDLVTVCANCHRMLHRLEGKPTDIVKLRRIFKHVGKCTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAFTRNNVQNAAVEFVKELRQSRLKQLLRIEHGNVVDNANTGGSVVEVAKLEERRAQIQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHH
VWFDKYLDGKNLVFWVGFYANDQSIIKNIIKYCPARMRNGNVFRKSDMKISGKISFLKKR
HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCHHCCCCCEEECCCCEEECCHHHHHCC
PDDQDLKFPIQEYYDDTNYFGIYETESFNVEKALRFIETVVSSLPEFDSGVSNDIFPENN
CCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
RILVGEHLRIERKAALARECKKRDRYRCQICNFHFVERYGLLGENFAEAHHKVPLSKLDG
EEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHCCCHHHHCC
EVKNCVDDLVTVCANCHRMLHRLEGKPTDIVKLRRIFKHVGKCTT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA