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The map label for this gene is yqjI [H]

Identifier: 182678398

GI number: 182678398

Start: 1628143

End: 1628772

Strand: Direct

Name: yqjI [H]

Synonym: Bind_1415

Alternate gene names: 182678398

Gene position: 1628143-1628772 (Clockwise)

Preceding gene: 182678395

Following gene: 182678399

Centisome position: 39.04

GC content: 60.79

Gene sequence:

>630_bases
ATGACGAAAGAACATATCCACGCCCACAAATTTCATCATTTCCTTCATTCCATCGGCCGCAGGCGCGGCCCGCATGGCTT
CGGCCGTGGTTGGGCTGAAGGGTTCGGACGAGGCTTCGGCGGAGGAGATTTTTCCGCCGGACGCAAGCTCAGCTCGAATG
AGCTTCAGCTCGTGCTGCTGGCGCTGTTGGCCGAGCGTCCTGCTCATGGCTACGAACTGATCCGCATGCTGGAGGAACGC
TCTGGGGGCTTCTATGCCCCGAGCCCAGGCATGGTCTATCCAGCACTGACCTATCTGGAAGAAATCGGCCACGCTTCGGT
CACGCAAGAGGGCAACCGCAAGCTCTACAGCCTCACCGAGGAAGGGCGTCAGTCTTTACAAGCCCACCGTGAGGAGGCTG
ACTTTATCCTCGAGACATTGGCTCGCATCGGCAGCCGCATGGCCGAGGTCCGCGAGGCCTTCGCCGGCGTTGATGCTGCA
GACCCCCAGGCGGCGGATGAACTGCATCAAGCCCGCCATGCCATCAAGCACGCTTTGATGCGCAAACGTGGCTGTTCCCC
AGCGGAAGCCCGCCGTATTGCTGGCATTCTCCAGCGCGCGACCGCCGAGATCCTTGAACAGTCCAACTGA

Upstream 100 bases:

>100_bases
ATTCGTTCTGGCTGCTTTTCTAAAAGCCAAGGCTGATAAAGCTCTAAAGGTGATTTAAAAAGCTCTTGAATTATATCTTA
CGATATGATTATCGTAAGAT

Downstream 100 bases:

>100_bases
ACGCCATGAAGCCTTTGGCCGGCATGGTCGAGCCAAGGGCTTCATTATTGACGTGCGTATCACTTTATTTTCAAAGACTC
ATCCATAATCAGGAAGTCAG

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTKEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLLALLAERPAHGYELIRMLEER
SGGFYAPSPGMVYPALTYLEEIGHASVTQEGNRKLYSLTEEGRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAA
DPQAADELHQARHAIKHALMRKRGCSPAEARRIAGILQRATAEILEQSN

Sequences:

>Translated_209_residues
MTKEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLLALLAERPAHGYELIRMLEER
SGGFYAPSPGMVYPALTYLEEIGHASVTQEGNRKLYSLTEEGRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAA
DPQAADELHQARHAIKHALMRKRGCSPAEARRIAGILQRATAEILEQSN
>Mature_208_residues
TKEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLLALLAERPAHGYELIRMLEERS
GGFYAPSPGMVYPALTYLEEIGHASVTQEGNRKLYSLTEEGRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAAD
PQAADELHQARHAIKHALMRKRGCSPAEARRIAGILQRATAEILEQSN

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=156, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 23157; Mature: 23025

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHH
ALLAERPAHGYELIRMLEERSGGFYAPSPGMVYPALTYLEEIGHASVTQEGNRKLYSLTE
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
EGRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAADPQAADELHQARHAIKHALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RKRGCSPAEARRIAGILQRATAEILEQSN
HHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHH
ALLAERPAHGYELIRMLEERSGGFYAPSPGMVYPALTYLEEIGHASVTQEGNRKLYSLTE
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHH
EGRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAADPQAADELHQARHAIKHALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RKRGCSPAEARRIAGILQRATAEILEQSN
HHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]