Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678377

Identifier: 182678377

GI number: 182678377

Start: 1601624

End: 1601914

Strand: Direct

Name: 182678377

Synonym: Bind_1394

Alternate gene names: NA

Gene position: 1601624-1601914 (Clockwise)

Preceding gene: 182678376

Following gene: 182678379

Centisome position: 38.41

GC content: 47.42

Gene sequence:

>291_bases
ATGTTCGTCGTTTTATTACATTACACCAAGCCACTTGCGGAAGTTGACCGTTTTGTTGGCGAACATCGAGAATTCTTGGA
GCGTTATTACGCTTCTGGCCATTTCCTCTTGTCAGGACGACAAGAACCTCGCACAGGCGGCGTGATACTCGCCAAGGGAC
CGACAAAGGCAGAGATCGAACACATCATTCGCCTCGATCCATTTTACAAAGAACAAATCGCTGAATACCAGATCGTGGAA
TTTGTACCGTCGATGTCTGACCCACAACTCGCCAGCTTGAAGGAATTGTAA

Upstream 100 bases:

>100_bases
GAATTGAACGTATGAGTGATTTTACAAGTCTTTATAATTGCATAAAATTCTGGAAAAGGGACCGTCCGCTTTGGTTTGAT
GCTTCAGGGGCTCCATCGAA

Downstream 100 bases:

>100_bases
TCTTTTAAGCGATTTTCCGGTTTCATGAATTCAATGGATAACGAGAGCATTTTCTGGTTCTATGGGACCAGAAAATGCTC
TCTATCTTTTTGTTTTAACG

Product: YCII-like protein

Products: NA

Alternate protein names: YCII-Related Protein; GTP Cyclohydrolase II; Ycii-Related Protein; YCII-Related Domain Superfamily Protein; YCII-Like Protein; YciL Domain-Containing Protein; YCII-Related Domain Superfamily; YciI Domain-Containing Protein; YCII-Related Domain-Containing Protein; Protein Conserved In Bacteria; YCII-Related Domain Family Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MFVVLLHYTKPLAEVDRFVGEHREFLERYYASGHFLLSGRQEPRTGGVILAKGPTKAEIEHIIRLDPFYKEQIAEYQIVE
FVPSMSDPQLASLKEL

Sequences:

>Translated_96_residues
MFVVLLHYTKPLAEVDRFVGEHREFLERYYASGHFLLSGRQEPRTGGVILAKGPTKAEIEHIIRLDPFYKEQIAEYQIVE
FVPSMSDPQLASLKEL
>Mature_96_residues
MFVVLLHYTKPLAEVDRFVGEHREFLERYYASGHFLLSGRQEPRTGGVILAKGPTKAEIEHIIRLDPFYKEQIAEYQIVE
FVPSMSDPQLASLKEL

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11092; Mature: 11092

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVVLLHYTKPLAEVDRFVGEHREFLERYYASGHFLLSGRQEPRTGGVILAKGPTKAEIE
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCHHHHH
HIIRLDPFYKEQIAEYQIVEFVPSMSDPQLASLKEL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MFVVLLHYTKPLAEVDRFVGEHREFLERYYASGHFLLSGRQEPRTGGVILAKGPTKAEIE
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCHHHHH
HIIRLDPFYKEQIAEYQIVEFVPSMSDPQLASLKEL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA