| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ppaX [H]
Identifier: 182678296
GI number: 182678296
Start: 1520241
End: 1520939
Strand: Direct
Name: ppaX [H]
Synonym: Bind_1313
Alternate gene names: 182678296
Gene position: 1520241-1520939 (Clockwise)
Preceding gene: 182678295
Following gene: 182678297
Centisome position: 36.46
GC content: 59.8
Gene sequence:
>699_bases ATGCTCCTGAATGACACGGTGTCCTTACGCGAAACTGGCCAGAACCGAAGATTAGTCATCTTTGACGTCGATGGCACATT GGTCGATAGCCAGGATTTCATCGTCGAGGCGATGCGGCGGGCCTTCGCCGTCCATGACCTGCCCATACCCGAGCGCAAAC AGGCGCTTTCAATCGTCGGTCTTTCTTTGCATGAGGCTTTCACCGTTCTGGTTGGGCCGGATGCGCCGATCGCCGGGCTG GTCGAGACCTATAAGGAGGCCTGGAACGCCATGCGGGCCGATCCCGCCTATGACGATCCTTTCTATCCTGGTGCACGAGA GACTTTGGATGCTTTTGCGGCGCGCACCGATCTCGTGCTCGGCATCGCCACCGGCAAGTCCCGGCGCGGCGTGAAGCATC TGCTCGATCGCTGGAATTTGCACAGCCATTTCGAAACGGTTCAGACCTCGGATGATCATCCCTCGAAACCGGCGCCCGAC ATGGTCCTTGCGGCCCTTGCGGAAACCGGTGTCGAGCCCGCTGATGCCTTCATGATCGGCGACACGGCTTATGATATGGA AATGGCTTGTGCTGCAGGCGTGCGACCGATTGGGGTCGCCTGGGGCTATCATGAGAGGGCCGTGCTCGAGGCCGCTGGCG CTGAACGGGTGGTCGCTGATTTTGCCGAAATCGAGGTCTTGTTGGGCCCAACCGGCTGA
Upstream 100 bases:
>100_bases CGCGGCGGCATTTTGGATGTCACGGCGCCTCTGCCTCCGCATATGCAAAAAACCTTCGATCTCTTCGGATTCGACATAAA GCACGAGGACCCGATCGATC
Downstream 100 bases:
>100_bases AAGACCGACCCAGCATCGCGAACAGGAAAAGGACGATGGCTGAACATCGCAACCCAGACGATCTTGCCGCTCTGTTTCCG CAAGCGGCTAGCGAGCCGAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLLNDTVSLRETGQNRRLVIFDVDGTLVDSQDFIVEAMRRAFAVHDLPIPERKQALSIVGLSLHEAFTVLVGPDAPIAGL VETYKEAWNAMRADPAYDDPFYPGARETLDAFAARTDLVLGIATGKSRRGVKHLLDRWNLHSHFETVQTSDDHPSKPAPD MVLAALAETGVEPADAFMIGDTAYDMEMACAAGVRPIGVAWGYHERAVLEAAGAERVVADFAEIEVLLGPTG
Sequences:
>Translated_232_residues MLLNDTVSLRETGQNRRLVIFDVDGTLVDSQDFIVEAMRRAFAVHDLPIPERKQALSIVGLSLHEAFTVLVGPDAPIAGL VETYKEAWNAMRADPAYDDPFYPGARETLDAFAARTDLVLGIATGKSRRGVKHLLDRWNLHSHFETVQTSDDHPSKPAPD MVLAALAETGVEPADAFMIGDTAYDMEMACAAGVRPIGVAWGYHERAVLEAAGAERVVADFAEIEVLLGPTG >Mature_232_residues MLLNDTVSLRETGQNRRLVIFDVDGTLVDSQDFIVEAMRRAFAVHDLPIPERKQALSIVGLSLHEAFTVLVGPDAPIAGL VETYKEAWNAMRADPAYDDPFYPGARETLDAFAARTDLVLGIATGKSRRGVKHLLDRWNLHSHFETVQTSDDHPSKPAPD MVLAALAETGVEPADAFMIGDTAYDMEMACAAGVRPIGVAWGYHERAVLEAAGAERVVADFAEIEVLLGPTG
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=212, Percent_Identity=27.3584905660377, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 25198; Mature: 25198
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNDTVSLRETGQNRRLVIFDVDGTLVDSQDFIVEAMRRAFAVHDLPIPERKQALSIVG CCCCCCCHHHHCCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LSLHEAFTVLVGPDAPIAGLVETYKEAWNAMRADPAYDDPFYPGARETLDAFAARTDLVL HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEE GIATGKSRRGVKHLLDRWNLHSHFETVQTSDDHPSKPAPDMVLAALAETGVEPADAFMIG EEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEC DTAYDMEMACAAGVRPIGVAWGYHERAVLEAAGAERVVADFAEIEVLLGPTG CCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHEEEEECCCC >Mature Secondary Structure MLLNDTVSLRETGQNRRLVIFDVDGTLVDSQDFIVEAMRRAFAVHDLPIPERKQALSIVG CCCCCCCHHHHCCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LSLHEAFTVLVGPDAPIAGLVETYKEAWNAMRADPAYDDPFYPGARETLDAFAARTDLVL HHHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEE GIATGKSRRGVKHLLDRWNLHSHFETVQTSDDHPSKPAPDMVLAALAETGVEPADAFMIG EEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEC DTAYDMEMACAAGVRPIGVAWGYHERAVLEAAGAERVVADFAEIEVLLGPTG CCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 9465101; 12359880 [H]